Cyprinodon tularosa (White Sands pupfish): 119792354
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Entry
119792354 CDS
T07496
Name
(RefSeq) chondroitin sulfate proteoglycan 4-like
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ctul00535
]
119792354
04091 Lectins [BR:
ctul04091
]
119792354
Proteoglycans [BR:
ctul00535
]
Cell surface proteoglycans
Others
119792354
Lectins [BR:
ctul04091
]
C-Type lectins
Others
119792354
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
Jag_N
DUF4381
RNA_pol_Rpb5_C
TMEM154
ASFV_J13L
7tm_3
Motif
Other DBs
NCBI-GeneID:
119792354
NCBI-ProteinID:
XP_038154884
LinkDB
All DBs
Position
Unknown
AA seq
2566 aa
AA seq
DB search
MGSFLADLLILLLISLGHVYAVSFHGNGYIHLQTIEKSIQTSIHVRFRTSSQSGLIFLAA
GRRDFLLLELISGRLQVRLDLGSGERSLRSAKGTHFNDLAWHTVDLNHTQHNINMTVDRT
SYTTLRMPGPDLELSIEDGLLVGGTAGLNHHYLLNISAGFRGCLDEVVFNEHNLLSSLQG
NSGYKRIHEVSLGCSPLFSATEEDPVRFSSSKAFISLPQWEVLQEGIFECELHPSWKEEN
GLVLYSFGSEGGFVSMEIRNGQVVASVGNGKGGKTEVHSLTHVYSKHTWYTIQVLLLPDS
IQLKVGKELVKTSLSQDLQAIQLKGPLFLGGLDEVALEKAKSAGFSSVSLEEGGGRSFKG
CLQKITVNGQKTGLPHAIATKDVTVGCNIGQAPKVVIISSSTDLPEHDVATTQTIGYRRV
TNLLSLRTLEVPEGGQALLEPKHIKVNLEFRKLGIHPSQLLCRIVEPPVRGQLRLNPSPG
PDGLPEETQERILGIGAEEKDRTFSILDLWQGRVMYVHSGSEDQEDFFTFSIFSNNKNER
PIFLEESHLHWFNISIAPVNDAPVLSLPQGNLFTLPEKSRRQLTTDMLRVSDPDSRPEDL
VFSSMGNLNSEAGYLENQDYPGRPINLFSLNDLEDGKITFVHTGVSASRLVLRASDGHRV
SNAVVLRIMAVTLEYKVENKYGLEVNQGEAAIISTSHLAVQVNMADSSVDVWYDVTELPQ
FGEIQRLHSSGEWKSTTFFSQRLLEKERIRYLSTYHGIQTQSNVKDQFKCKIVINSIARE
EVVFPIEIRWIQLKVTRSKMEVTGLESAVLTPEDLHVISKGIKISESDLFFRVLTVPKKG
RLFLRQKVLQRNSTFSQENITEGLVKYELFNRLHDDTRDSFSFQVFSAHAASTPYDFRIN
IKAESSAVTVLNKGLSILEGASKVITKDILFTHTGSSREVHYNVTVSPRHGQLRKINLSN
STSINDNILTFTNQDITEERVMYVHDDSETKQDYFMFQIAVYKSNKQANRKDEGNPEEHI
FNISVQLVNDQRPVRVVDKVFHVARDGQRLVTLKDLRYRDDDSDFEDSWLVYTRRGIPMG
ELVLASDPSHRLYEFTQRDLEQNKVLFIHSGVSFGRFVLFVTDGKHYVSALLEVIAQDPY
LQVENNTGLMVQQGGIAALTSANLSVISNLDIRDPQEVTFEVYVPPSQGVLCFSDGQKEA
IIGTDAISVFTQRDLVAGRLAYHHSGGHKLLDVFNVTARARERSTERLTERGRREVHLDI
GVPVKIYLESHHRPPTVKTNRPVVVAEGQNTSISREDVEVVHDDSLPSEIIFTVQVPPRV
GIIYKSPSNKSQEDIKVENQQIKKGLKDQPTASFTQEDLNQRSVMYQQQAAGSINDSIVL
EATNGVTKVGPFTVMIDIIPIRLPLQVLNLTLDEGSSLPLTSRIIKVASHHFSGLNFLYQ
VIVPPRCGHLEHSRIPGMPIHAFTHTEVEHEYISYVHDGSETLMDNFTIIANQTEMKKHS
LPCTVHITVTPVNDETPVVTTNRGLKVWVGSITEISTNELSAEDSDTPPEGLEYVVTPPS
NGHLALKRSPSRYILNFTQTHIQSRQLVFVHSGPLTGGFHFQVNDGVNFAPRQIFSTTAQ
ALVLTLQKNHPMEVYPGSLTPISEQELQVVTNNISDIARNQSVVFAVTAPPKFGRLVQRM
PDNSFRNISTFTQRMVNDGLILYDQNKPESVGWSAADSFSFTVSSPPAFLPPHTFTILIS
YQANDHFGNPQQRTRLLNNAGAVVAEGGRVTIDRSKLDASNLLGNLPESNRKDHHIMYRV
ISLPRHGALTIQGHNLTRSQTDFSQATLNKFGIMYLHDDSETTKDSFTFRAWVAPLHLPS
SSSSLPLSSFSSDSSSFTSFSPIYSPSLPSYPALGTASHRHPTMDGVAVTEMFNITVTPV
NDHPPLIRSRAPSMKVVVGERVILGPDNLQVEDHDTPPEELHYLVISKPNNGFLTLGERP
EPVTSFTQYDVNHGRLHFTQQGEVSTGVFYFNVTDGHHRPLYKLFSLEVVNPSVSMVNNT
GLSLVQGRTAVVLTTNQLAAQTNGQRQANISYMVTKHPRHGRIAINDQEVTTFQHEDLQF
GRVVYHMTDLSESEDSFQISVSAWSSGVDYGRLTEQTVNVTVRPLVYLREPVRVPSGIAV
KLGKAMIDASELARISRVDPVFEVLSPPKHGKLVKITYDPNHASEALRSFTFRDVIQGRV
AIEETLSDADSQIHNNESALTKARGHTPATPLNDSFTFLLKAGNVQPAKGELHFTIFPHH
QMRHGTRGFHKVRGASHEHVTTRFGAHNRTTLDDGHGEAEMHSTTAESLHPYILSNKNQN
KTQRKMKPHNRWGNRTRSHGGRSGTPPEIAVEGHTHAPQPHTPPVPEIQVPIIPPIPDLV
NVEILPRPASDPLLIILPLLACLLLIVILVVLILVFRHRKEKQARQRLMHELAAMQLPSE
DSPYPGRPQRSMAMPNVLVTQLGSASCPTSPRVSMSPRRSLAPGMTFWGPIESDLAGRDG
NIRGRNNSEIENLGCANMPQVSPAGFKTAWRSRSPTPTLKDSQFWV
NT seq
7701 nt
NT seq
+upstream
nt +downstream
nt
atgggaagttttttggctgatctgctcatactactcctgatttctttaggacacgtttat
gcagtttccttccatggcaatggctacattcacctgcaaactatagagaagtccattcag
acgtccatccacgtacgatttcgtacctcaagccagtctgggctaatatttttggcagca
ggacgcagagacttcttacttcttgagctgatctctggacgactgcaggtacgcctggac
ctgggctcaggtgagcggtcgctgcgttcagcaaagggaacccactttaatgatctggcc
tggcacacagttgatctaaatcacacacagcacaacatcaacatgactgttgaccgaacc
tcttacactactctccggatgccaggaccagatttggagctcagtatcgaggatgggctc
cttgttggtgggacagcgggacttaaccatcattaccttctaaacatctcagctggcttt
agaggttgcttggatgaagttgtcttcaatgaacacaacctactctctagccttcagggg
aattctgggtacaagagaatccatgaggtttcactgggttgcagtccactgttttcagca
acagaggaagatcctgtgaggttttccagctctaaagccttcatctctctaccccaatgg
gaggttcttcaagaggggatatttgagtgtgaacttcacccttcttggaaagaagaaaat
ggattggtgttgtacagctttgggagtgaaggagggtttgtctcgatggagatcaggaat
ggccaggttgtggcctccgtaggaaatggaaagggtggtaaaaccgaggtgcattcactg
acacatgtctacagcaagcacacctggtacaccatccaggtgctcctactacctgatagc
attcaactgaaggtaggcaaggagttagtgaagaccagtctgagtcaggacctccaggcc
atccagctcaaagggcctctcttccttggaggactggatgaggttgctctagaaaaagca
aaaagtgctggattctcttctgtttctcttgaagaaggagggggaagatcatttaaaggc
tgtctacaaaaaattacagtgaatggccaaaagactggcttacctcatgccatagccact
aaggatgttactgtgggctgtaacataggccaggctccaaaggtagtgatcatatccagt
tccacagatttgcctgagcacgatgttgccaccacacagactatcggctacaggagggtc
acaaatttattgtcgcttcgaacgttggaggtccctgaaggtggccaggcactgcttgaa
cctaaacacataaaggtaaatcttgagtttcgcaaactggggatccatccatcacaactg
ttatgtcgcattgttgagcctcctgttcgtggtcagctgcgtttgaatccaagtccaggt
ccagatgggttgcctgaggaaacacaggaaaggatcctcggaataggggcagaggagaag
gatcgtactttcagcatcttggacctgtggcagggccgggtcatgtacgttcacagtggc
tctgaagaccaggaggactttttcacattttcaatcttctctaacaataagaatgagagg
cctatatttctggaagaaagtcatttgcactggtttaatatcagcatagctccagttaat
gatgctcctgttcttagtttgccacaaggaaacctgtttactctgcctgagaagtctaga
cgacagctgacaacagatatgctgagagtgtcagaccctgacagcaggcctgaggatctt
gtatttagctcaatgggaaacctaaattctgaagctggttaccttgagaaccaagattac
cctggcaggcccatcaacttgttctctctaaatgatctggaggatggtaagatcaccttt
gtgcacacaggagtttctgcatccaggctggttctcagagccagcgatggacatagagtc
agcaacgcagtagttttaagaatcatggcagtgacacttgaatacaaagtagaaaataaa
tacggactggaggtgaatcagggggaagctgccatcatcagcaccagtcaccttgctgta
caggtcaatatggcagatagttcagtagatgtgtggtatgacgtgacagagttgccacag
tttggtgagatccagaggttgcactcaagtggcgaatggaaatccaccacctttttctca
cagagacttctggaaaaggaaaggatccgatatctcagcacctatcacggaattcagact
caaagcaacgtcaaggaccaattcaaatgtaaaatagtcatcaattcgattgcaagagag
gaagttgttttccctatagagatccgctggattcaactgaaagtaacacgaagcaagatg
gaagtgactggtcttgagagtgccgttcttacgcctgaagaccttcatgtgatttctaaa
ggtattaaaatcagtgagagtgatctcttcttcagagtcctgacagtaccaaagaaaggg
aggttgttccttagacagaaggttttgcaaaggaactcaacctttagccaagaaaacatc
acagaaggtttggtgaaatatgaactgtttaacaggctgcatgatgacactagagattcc
ttcagctttcaggttttttctgctcatgctgcttcaacaccttatgacttcagaatcaac
atcaaagcagagtcaagtgcagtaactgtcctaaataaaggcctttcaatccttgaagga
gcaagtaaagtaattacgaaggacattttgttcactcacacgggaagtagccgagaagtt
cattataatgtaaccgtgagccccaggcatgggcagttaaggaagatcaatctgtccaac
tcaacttccattaatgacaacatactgacattcaccaatcaggacatcacagaggagcgt
gtcatgtacgttcacgatgacagcgagaccaaacaggattacttcatgtttcaaattgct
gtgtataaatctaacaaacaggcaaacaggaaagacgagggaaaccctgaggagcacatc
tttaacatctctgttcaactagtcaacgatcagagacctgtcagggttgttgataaggtt
ttccatgtggcccgggatggacagaggttggtgacattgaaagatctgcgctaccgagac
gatgactcggattttgaggacagctggttggtctatacgcggagggggatcccaatggga
gagctagtgctggccagcgatccaagtcacaggctatatgaattcacacagcgggacctt
gagcagaacaaggtgttgtttatccacagtggtgttagctttggccgctttgtgcttttc
gtaacagatgggaaacactatgtgtcagcgctcctggaggtaattgcacaggatccatac
ttgcaagtggagaacaacacgggtctgatggtccagcagggtgggattgcagccctgact
tctgctaacctcagcgtcatcagcaacctagacatacgggacccccaggaagtaactttt
gaggtctacgttccacctagtcagggtgtgctttgctttagtgatgggcagaaggaggca
atcattggaactgatgccatttcagttttcacccagagagacttggtggcagggcgtctg
gcctatcaccacagcggaggccacaagttgttggacgttttcaatgtgacggcaagagca
agagaaagaagcactgagaggctcactgaaagaggaaggagggaggtgcatttggatata
ggagtgccggtaaaaatatatttggagagtcatcacaggcctccaaccgttaaaaccaac
cgcccggtggtggtggcggagggacagaatacctccataagcagggaagatgtagaggtg
gtccacgatgacagtttaccctcagaaataatcttcactgtccaagttcctcctagagtc
ggcatcatttataaatcaccaagcaacaaaagtcaggaagatataaaggtagaaaatcag
caaataaaaaaaggtttaaaggatcagcctacagcctcatttactcaagaagatctcaac
cagagatctgttatgtatcagcagcaggctgcaggaagtattaatgactctatcgtctta
gaggcaacaaatggggtgacaaaggttggacctttcacagtgatgattgacatcataccc
atccggcttcccctacaggtgttaaacttgactctggatgaagggtcgtccctgcctctc
acatcgagaattatcaaggttgcaagtcatcacttttcagggctgaatttcctttaccag
gttattgttccaccaagatgtggacacttggagcacagccgtatcccgggaatgcctatc
catgcttttacacacacagaggtggagcatgagtacatctcttatgtccatgatggcagt
gaaactctgatggacaactttacaattatagccaatcaaacagagatgaaaaagcatagc
ttgccttgcacggttcacatcacagtcacacctgtcaatgatgagacccctgttgtcacc
accaaccgtgggctaaaggtgtgggtggggtctattacagaaataagcaccaatgaactc
agtgcagaagactcagatactccacctgagggcctggagtatgttgtcacaccacctagc
aacggtcacttggctctgaagcgctccccctccagatacatcttgaactttacccaaact
cacatacagagcaggcagctggtgttcgtccacagcggaccattaacggggggctttcac
tttcaggtgaatgatggagttaattttgctcctcggcagatcttcagtaccacagcccaa
gctcttgtccttactttacagaagaaccaccccatggaggtttacccaggctcgttgacg
ccaatctcagagcaggagcttcaggttgttaccaacaatatcagtgacattgcaagaaac
caatctgttgtttttgctgtgactgctcctccaaaatttggtcgcctggttcaacgaatg
cctgataactcttttagaaacatttccacgtttactcagcgcatggtgaatgatgggttg
atcttatatgatcagaacaagccagagtcggtgggctggtcagctgcagactccttctct
ttcaccgtgtcctctcctccagctttcctccctccacacaccttcaccattttgatctcc
taccaagccaatgatcactttggcaaccctcaacagaggaccagactactaaacaatgca
ggtgctgtggtggcagaaggaggcagagtgactattgaccgctctaaacttgatgcctcc
aacctgctgggaaaccttccggagtccaacagaaaggaccaccacatcatgtaccgagtg
atttctctgcctcgacacggagcactgactatacagggacacaatctcaccaggagccag
acagatttctcacaagctaccctgaacaagtttgggatcatgtacctccatgacgactca
gagacaacgaaggacagctttacttttcgggcctgggtggctcctttgcatcttccctct
tcctcctcttcattgcccttgtcttccttttcctctgattcctcgtctttcacttctttt
tcccctatctattctccttcgttgccctcctacccagctctgggaacggcttctcatcgc
caccctaccatggacggcgtggcagtgacagagatgttcaacatcactgtgacgcctgtc
aatgaccatccaccgttaatcagaagcagagccccgagcatgaaggttgtggttggggag
agagtcattcttgggcctgataaccttcaggttgaggaccatgatactccaccagaagaa
ctgcattaccttgtgatcagcaaacccaacaacggtttcctgactttgggagaaagacct
gagccagtgacttctttcacacagtatgacgtcaaccacggccgactgcatttcacacag
cagggtgaggtctcaactggagttttctacttcaatgtcaccgatggtcatcaccgtcca
ctctacaagctgtttagcttagaggttgtgaacccatctgtatccatggttaacaacacg
ggcctgtcattggttcaaggccgcactgcggttgtgttgacaaccaaccagctggcggct
caaaccaacggtcagaggcaggccaatatctcctacatggttaccaagcacccacgccat
ggacgcatagctatcaacgaccaggaggtcaccaccttccagcatgaagacctccagttt
ggtcgggtcgtctatcacatgactgatctcagcgaatcagaggacagcttccagatctca
gtgtccgcctggtcttctggtgttgactatgggagactgacggagcagacggtgaatgtc
actgtgaggcctctggtctaccttagagaaccagttagagtcccgagtggtattgctgta
aaattgggaaaagccatgattgatgcctccgagcttgccagaatcagcagggttgatcca
gtttttgaggttctctctccaccgaagcatggcaaattagtcaagattacctacgatcca
aaccatgcatcagaggcactgaggtcatttacattcagggatgtcatacagggcagagtt
gccattgaagagactctcagtgacgccgacagccagatccacaataacgaatccgcgctc
acaaaggcccgtggccacacaccagccactcccctcaacgattccttcaccttcctgcta
aaagccggaaacgtccagccagcgaagggcgagcttcacttcaccatctttccacaccac
caaatgcgacatggcacaagaggtttccacaaagtacgtggagcaagtcatgagcacgtc
accacccgtttcggagcccacaacagaacgactctagatgatggacatggagaggctgag
atgcacagtacgactgctgagagtttgcacccttacattttgtcaaataaaaaccaaaac
aagactcagcggaagatgaagccccacaaccgctgggggaatcgtacgcgcagtcacgga
ggaagatcagggaccccccctgagatagcagtagaggggcacactcatgctccacagccc
cacacccctcctgtcccagaaatacaggttccaataatccctcccatccccgacctggtt
aatgtcgagatccttcctcgtcctgcctctgaccccctcctcatcatcctacccctcctg
gcttgtttgcttctcatcgtaatcctcgtggttctgattctcgtttttcgccatcgcaaa
gagaaacaagctcggcagcggctgatgcacgaactggctgcaatgcagttacccagtgag
gacagcccttacccgggccggccgcagagaagcatggccatgcctaacgtgttagtcacc
caactcggctctgcaagctgccctacctccccaagggtatccatgagcccaaggaggagt
ctggctcctggcatgaccttctgggggccgattgaatctgatttagcaggtagggatgga
aacatcaggggtcgtaacaatagtgaaatagaaaatctaggctgtgctaatatgccccaa
gtttctcctgcagggtttaaaaccgcttggagatcccggtcccccactccaactcttaaa
gacagccagttctgggtttga
DBGET
integrated database retrieval system
