Cyprinodon tularosa (White Sands pupfish): 119792461
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Entry
119792461 CDS
T07496
Name
(RefSeq) collagen alpha-1(XXIII) chain isoform X1
KO
K24355
collagen type XXIII alpha
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ctul00536
]
119792461
Glycosaminoglycan binding proteins [BR:
ctul00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119792461
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
119792461
NCBI-ProteinID:
XP_038155009
LinkDB
All DBs
Position
Unknown
AA seq
628 aa
AA seq
DB search
MEKGNSGSDGESKPECQCATKPGVQRWLPGFPLLLCLLMSLSSITVCLLMGFRTHQLENR
LHMELDKASILLSPKRSFLNEDGTLISTLSAPVGQLVEEKMAALMPKLRTARDIGQGCSC
PPGPPGKRGRIGKKGEPGLPGKAGRDGYPGPLGLDGKPGFPGPKGSQGLPGPKGEKGDQG
DIGPRMVFPRYDHGFLAGEQSSTFQRRFMKGDQGQAGPAGPPGPPGPPGPRGPPGNTGKD
GPRGPAGEAGLPGRDGVEGPQGAPGKPGEDGEPGYPGQQGPPGPRGEPGTGEKGERGMDG
LPGIKGDKGEAGEQGPQGPMGYPGEKGAAGSSDIVDFNGKLLDAFQAIKTISVSGPPGPP
GPPGPQGEKGELGLPGPAGVDGEKGSKGDVGETGPPGERGEKGEMGLSGPSGMDGHKGEK
GDCRLDDNLIQMISQPGPPGPPGPPGVPGSPGSMGLHGMPGPKGEPGIGIKGEKGEHGAP
GYKGLDGHQGPPGAPGLVGLPGAKGEKGRPGEPGLDGFPGLRGEKGDRGEKGDKGDRGTV
GKRGLKGSKGEQGPPGLDQPCPVGCDESKDHSVKAGLSSPETAPLPPSGPEAPCPVGHDG
LPIPGCWHKTHFEEMARQKIKRKRLSQP
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaggaaacagcggctcggacggggaaagcaagccggagtgccaatgtgccacc
aagcccggggtccagcggtggctgccgggctttcctctcctgctctgtctgctcatgtct
ctgagctccatcaccgtgtgtcttctgatgggcttcaggacccaccagctggagaaccgg
ctgcacatggagcttgacaaggcgtccatcctcctttctccgaagaggtctttcctaaac
gaggatgggaccctgatttcaacgctcagcgccccagtgggacagctggtggaggagaaa
atggcagctctgatgccaaaattgcggacagctagggatattggccaagggtgctcctgt
cctccagggcctccaggaaaacgtggacggatcggaaagaaaggcgaacctgggcttcct
ggcaaggctggacgggatggatacccgggtccacttggcttggatggcaaaccaggcttt
ccaggtcccaaaggaagccaggggctgcccggacccaagggagagaagggtgaccaagga
gacattgggccaaggatggttttccctcgatatgatcacggctttctcgctggagagcag
tccagcacctttcagagacgctttatgaagggtgatcaaggccaagctggacctgccggg
cctcctggtccaccgggtcctcccgggccccgtggccccccagggaacaccgggaaggac
gggccccgtggccctgctggagaggcgggtttgcctggtcgtgatggtgtagagggaccg
cagggagcccctgggaagccgggagaagatggagaacctggctatccaggacagcagggt
cctccagggccaaggggggaaccaggtactggagaaaagggagagagaggcatggatgga
ctaccaggaataaagggtgataaaggagaggcaggagagcaaggaccacagggacccatg
ggttatcctggtgaaaagggtgctgcaggctcctcagatattgttgatttcaacgggaag
cttctagatgctttccaggccatcaaaaccatcagtgtttcgggtccacctggaccacca
ggacctcccggccctcaaggggaaaagggagagcttggattacctgggcctgcaggagta
gatggagaaaagggatccaaaggtgatgtgggtgaaacaggacctcctggtgagagagga
gagaaaggagagatgggtctgtctggaccttctgggatggatggacacaaaggggaaaaa
ggtgactgcagactggatgacaacctgattcagatgatttctcagccggggcctcctggt
ccccctggacctccaggagtacctgggtctccaggatccatggggctgcatggtatgcct
ggtcctaagggtgagccaggaatcgggattaaaggagagaagggagaacatggggctcct
ggatacaagggactggacggccaccagggtccacctggggctcctgggttagtgggcctc
ccaggcgcaaagggagaaaagggtcgaccaggggaaccgggtctagatggttttccaggt
ctgagaggagaaaaaggcgaccgaggggaaaaaggagacaagggtgacagagggacggtc
gggaagagaggtctgaagggtagcaagggagagcagggtcctccaggactggaccagccg
tgtcctgtgggctgtgatgaaagtaaagatcactctgtgaaggcagggctttcttcccct
gaaactgctcctcttcctccttctggccccgaggccccctgtcctgtgggacatgatggg
cttccaataccaggctgttggcataagacacactttgaggaaatggcgaggcagaaaatc
aaacgcaagcgtctctctcagccctga
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