Cyprinodon tularosa (White Sands pupfish): 119792498
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Entry
119792498 CDS
T07496
Symbol
atrx
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
119792498 (atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctul03000
]
119792498 (atrx)
03036 Chromosome and associated proteins [BR:
ctul03036
]
119792498 (atrx)
Transcription factors [BR:
ctul03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
119792498 (atrx)
Chromosome and associated proteins [BR:
ctul03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
119792498 (atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ATRX_C
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
119792498
NCBI-ProteinID:
XP_038155080
LinkDB
All DBs
Position
Unknown
AA seq
2070 aa
AA seq
DB search
MGEKGEEPGSSSDNMKPSSSHSKRKPTSVPKHKEQKDSDASTGSENEAANSDSNTGSDSK
GTLVMKPSGNENKGAMKLRVDFKQKKPDDTLEKKVNCTACGKQVNQFQRNSVYEHPMLKV
LICKSCYKYYTSDDIGRDSDGMDEQCRWCAEGGKLICCDYCNNAFCKKCILRNLGRKELS
NITDENSKWHCYVCRSDPLQDLVASCQNIMQRKEEAEMKQRKTEKAEEREARKEKKKSPK
EQKAVANGKEHNEGLGTMTFSYKNLQIPKDQLKKAKKLVETTTGLNNTFIQFIQQAADDQ
ADASIRYRHLKAFKAVLTDLRQAHNALEEALKPEFRKMEPQNGIEGQHVRKAGPAVETSE
NNEMECAPDPVPSVDGERHDEVKMEVEEMKEGTKEPPEEKDLVCKSGKRTEVKKEVDGDA
DSDCRTQNEEMVEEPPNEKDFSTKEAFEEPSSRTEQVDEAETMEEVVTEQQDGKANEVSD
DTQTEEQQSETSPPLVVKTEVVDGQPLSSAEASLDQDIMSVPPSVPEELFQMVESLADSS
MLSRTDTTSEKDTDTKSKENPPETPCPKPKVKNLIVKLTPVPVVKSGGSRSSKSKKGDEE
QTSKSKDKEDSAAAEEGTDSPPPTRRSSRVKTTPLRKQGENKGKKDSSDSESEEDAKAKP
SKKSNNTKKKTNSSEKVLEDSDSDEVPPALLEKATRGDKSTDEEQESTAAKKRLFKSETS
SKDEKLTKRKRKSESSDSDGENKNKKTTKKKKNCSSDNSGSDSDAEKETKTKATVAKRRS
SRVKKQEDAKGEEKSSPDRKAADRKRSYEKKRKGNSPKVASKLQSSSEEEEEEEEEDAGG
ESGEDSDQQKIKPIVEDNVVGGSGVFHQSSGDEVDTKEDLQVFEDDDDDPENRIAKKMLL
AQIKSSYSSGAESSSDNEEEDVKDKSSKRAKKEEDEEDDMVTEDSESDVEVKKPGKRHKL
LRHKLSLSEAESGDEKDSGKEKKAKGSKKKSARKAVGSDDSEDTDFKDSESSSESGMSEE
VSDSGKENKRRKTRSAKKKEDKNQRSYKQQKKKRRRIKVQDDSSSNEKSGEEGGESEGQE
GDGTKGRKKLRKILKDDKLRTETRDALKEEEERRKRIAEREALRQKLREVVVVEEASQMV
CPITTKLVLDEDEETKEPLVQVHRSLVTKLKPHQVDGVQFMWDCCCESVKKIQKSAGSGC
ILAHCMGLGKTLQVVTFLHTLLLCEKLDFSTALVVCPLNTVLNWLNEFEKWQEGLKDEES
LEVTELATVKRPQERAYALQQWQESGGVMIMGYEMYRNLTHGRNIKSKKLKETFQKTLVD
PGPDLVICDEGHILKNEASAVSKAMNSIKTRRRIVLTGTPLQNNLIEYHCMVNFIKENLL
GSVKEFRNRFINPIQNGQCADSTPHDVRIMKKRAHILYEMLAGCVQRKDYSALTKFLPPK
HEYVLSVRITPLQCKLYRHYLEHFTGVGNALEGGRGRAGTKLFQDFQMLSRIWTHPWCLQ
LDYISKENRGFFDEDSMDEFIASETEESSMSMTSEDEKTKKKKKQGKGKKKGSDDSDSDE
VEVIKEWNSSSRGRNGEGRRQAEPVEEPTRVGGSTPGSPCSADWYKEFVTEADAEILEHS
GKIMLLFEILRMAEEVEDKVLVFSQSLISLDLIEDFLELSSRGEDSEKPSPYKGEGKWYR
NIDYYRLDGSTNAPTRKKWAEDFNDTSNTRGRLFLISTRAGSLGINLVAANRVIIFDASW
NPSYDIQSIFRVYRFGQVKPVYVYRFLAQGTMEEKIYERQVTKQSLSYRVVDQQQIERHF
TMNELAELYTFEPDMLDDPSEKKSKRATPMLPKDPILAEMLQNNKDQIVCYHEHDSLLDH
KEEEALSEEDRKAAWAEYEAEKKGLSTRTNYPMSYAQPDMGTSNYFSFNMAALATMSNQQ
LEDLISQGRQKVIEATNALKALARETMEDIIARIWKENPTLTENEVQALTLRHQANVEIE
LKRREAIYRDVLTRQQTLMMYVQKLITNRKVQEQQLAMANQATYLNQLALQNGMMAGGMN
QMNLLGLYQRLHGMGGNQSDGKNPGPSQGM
NT seq
6213 nt
NT seq
+upstream
nt +downstream
nt
atgggagagaaaggagaggagcctgggagctcatcagacaacatgaaaccatcttcctct
cacagcaagaggaaacccaccagtgtacctaagcacaaagaacagaaagactcagatgca
tcgactggcagcgaaaatgaagctgccaattctgacagtaatacaggcagcgattctaaa
gggaccttagtgatgaaaccgagcggaaatgaaaacaaaggtgccatgaagctaagagtg
gatttcaaacagaaaaaaccagacgataccctggagaagaaggttaactgcacagcctgc
gggaaacaagtaaaccaatttcagcgcaactctgtgtacgagcatccaatgctcaaggtt
ctcatctgcaagtcatgttacaaatactacacaagcgatgacatcggccgggattcagat
gggatggatgagcaatgcagatggtgtgctgagggcgggaagctcatctgctgtgactac
tgtaacaacgccttctgcaaaaagtgcatactgcgaaacctgggcagaaaggagctgtca
aatatcacagatgagaactcaaagtggcactgctatgtgtgccgctctgaccccctgcag
gatctggtcgccagctgccagaacatcatgcagaggaaggaggaagctgagatgaagcag
cggaaaacggagaaagcagaggagcgggaagcgaggaaggagaagaagaagtctcctaaa
gagcagaaagctgttgcaaatgggaaagagcacaacgaaggcttggggaccatgaccttc
tcttataaaaacctgcagatacccaaagatcaactaaaaaaggcaaagaagcttgtagaa
acgacaaccggtttgaataacaccttcattcagttcatccagcaggcggccgacgaccag
gcagacgcaagcatcaggtatcgacatttgaaagcctttaaggcggtgctgaccgatctg
aggcaagcccacaacgctttggaggaagctttaaagccagagttcagaaaaatggagccg
cagaacgggatcgaagggcaacacgtgagaaaggccggccccgctgtggaaacctccgag
aacaatgagatggagtgtgccccagatccggtccctagcgtggatggcgagcggcatgat
gaagtaaagatggaggtggaagaaatgaaggaggggaccaaggagccgcctgaggagaag
gatttggtgtgtaaatctggcaaaaggacagaggtgaagaaggaggtggatggtgacgca
gattcagattgtagaacacaaaatgaggagatggttgaagagccgcctaatgagaaggac
ttttcaacaaaagaggcgttcgaggaaccatccagtagaacggaacaggtcgatgaagca
gaaaccatggaggaggtagtgacggagcagcaggacggtaaggccaatgaagtgtctgat
gacactcagacagaggaacagcaaagcgaaacaagcccgcccctagtggtaaaaactgag
gtcgttgacggccaaccgctgtcctctgctgaagcgtcattagatcaggacataatgtct
gtgcctccttcagttccagaggagcttttccagatggtggagagtctcgctgattcctcc
atgctctcaaggaccgacaccacttcagagaaagacacagacacaaagtcaaaggagaat
cctccagaaactccttgtcccaaacccaaagtaaagaacctgatagtcaaactgactcca
gtgccggttgttaaaagtggcgggtctaggtcctccaagtctaaaaaaggagatgaagag
cagaccagcaagagcaaggataaggaagattctgctgcagcagaagaagggacagacagc
ccaccgccaacccgccgctccagcagagttaagaccactcctttacggaagcaaggggaa
aacaaaggcaagaaagactcctctgattcagagtctgaggaagacgccaaggccaagcct
tcaaagaaatccaataacactaaaaaaaagactaacagttcagagaaagtgttggaagac
tccgattcagacgaagttcctcccgctctgctggaaaaagccacaagaggcgacaaaagc
acagatgaggagcaggaaagcacagctgccaaaaagcgtctgtttaaatcagaaacgtcc
tcgaaggacgagaagttaacgaaacgcaaaaggaagtccgaaagctctgattcagacgga
gagaataaaaacaagaagacgactaagaagaagaaaaactgcagctcggacaactctggg
tcagactcagacgcggagaaggagaccaaaacaaaagcaaccgtggccaagaggagatct
agccgtgtaaagaagcaagaagacgcaaaaggggaggagaaaagctcaccggacaggaag
gctgctgatcggaagcgttcctatgaaaagaagcggaagggaaatagcccgaaagtcgcc
tccaagctgcagtcttcatctgaagaagaagaagaggaggaggaggaggatgctggcggg
gaatccggagaggatagtgaccagcaaaagatcaaacccatcgtggaggataacgtggtc
ggaggcagcggagtcttccatcagtcctctggagacgaggtagatactaaagaagacttg
caggtgtttgaagacgatgacgacgaccctgagaacagaattgcaaagaaaatgctcctc
gcacaaataaagtccagttactcttcaggagcagaaagctcctctgacaatgaagaggaa
gatgtgaaagacaagtcctctaagagagctaaaaaggaggaggatgaggaagatgacatg
gttacagaagactctgagtccgatgttgaagtgaagaagcctggcaaacgtcacaaactg
ctccgccacaagctctccctgagtgaggcggaatctggggacgagaaagactcgggcaag
gagaaaaaggccaaggggagcaagaaaaaatctgcacgtaaagcagttggcagcgatgac
tctgaagacactgacttcaaggactctgagtctagttcagaatcggggatgagtgaagag
gtcagcgactcagggaaggagaacaagcgcagaaagaccagatctgcgaagaagaaggaa
gacaagaatcagagaagttataagcaacagaaaaagaagcgacgcaggatcaaagttcag
gacgactcttccagcaatgagaagagtggagaggaaggaggtgagagtgaagggcaagaa
ggagacggaaccaaaggccggaagaagctccgcaaaatcctgaaggacgacaagttgagg
accgagaccagagatgctctgaaggaggaggaggagaggaggaaacgcatcgcagagaga
gaggcgctcaggcagaaactgagagaggttgtggttgtagaggaagcatcccagatggtc
tgccccatcaccaccaagctggtattggatgaagatgaagagaccaaggagccactcgtt
caggtccacaggagccttgtaacaaaactcaagcctcatcaggttgacggtgttcagttt
atgtgggactgctgctgcgagtctgtgaaaaagattcagaaatctgcaggttctggctgc
atcctggctcactgcatgggtctaggaaaaactctgcaggtggtgacattcctccacacc
ctgctgctctgtgagaagcttgacttcagcacagctctggtggtttgtcctctcaacact
gtccttaactggcttaatgagtttgagaaatggcaggagggactgaaggatgaggagagc
ttggaggtaacggagcttgctacggtcaagaggccgcaggagcgtgcgtacgccctccag
cagtggcaggagtcgggcggcgttatgatcatgggttatgagatgtacagaaatcttacg
cacggccgaaacatcaagagcaagaagctaaaagagacgtttcagaaaaccctcgtagat
ccaggtccagacttggtgatctgtgacgaaggccacatcctgaagaacgaggcgtccgcc
gtctccaaagccatgaactccatcaagacgaggaggaggattgtgctgactggaacgcct
ctgcagaataaccttattgaataccactgcatggtgaactttataaaggagaacctgctt
gggtccgtcaaagagttcagaaaccgcttcattaaccccattcagaatggccagtgtgcc
gactctacgccgcatgacgtccggattatgaagaagagggcacacatcctttatgagatg
ctggccggctgcgtccagagaaaagattactcggcgctcacaaagttccttccacctaaa
cacgagtacgtgctgtcggtcagaataacgccgctccaatgtaaactctaccgacattac
ctggagcactttacaggtgtgggaaacgctctggaaggaggccggggccgagcaggaacg
aagctcttccaggatttccagatgctcagcagaatctggacccatccctggtgccttcag
ctggactacatcagcaaagaaaacaggggcttctttgacgaggacagcatggatgaattt
atcgcttcggagacggaagaatcctccatgagtatgacctcagaggacgagaagaccaaa
aaaaaaaagaaacagggaaaagggaagaagaaaggctcagacgactctgacagcgacgaa
gtggaggtcatcaaggaatggaacagcagctctcgcggcaggaatggagaaggtcgaaga
caagccgaacctgtcgaagaaccaacccgggtgggcggctctacgcctgggagtccctgc
tctgccgactggtacaaagagtttgtcactgaggccgacgccgaaatcctggagcactca
ggaaagataatgctactctttgagattctgcgcatggctgaggaagtagaagataaagtg
ttggtgttcagtcagtctctcatctctcttgacctgatagaggattttctagaactttcc
agcagaggcgaggattctgagaaaccctctccatacaaaggtgaaggaaaatggtataga
aacatcgactattaccgtctggacggctccactaacgctcccactaggaagaagtgggcc
gaggactttaatgacaccagcaacacaaggggtcgtttgtttctcatatcaacgcgagct
ggatctctcggcatcaacctggtagcggccaacagggttatcatctttgacgcctcctgg
aacccgtcgtatgacatccagagtatcttcagggtttatcgctttggacaggtcaaacct
gtctacgtctacaggtttcttgcacaaggtacaatggaggagaagatttacgagcggcag
gttaccaagcagtctctgtcctaccgagttgtggatcagcagcagatcgagagacacttc
accatgaacgagctagctgagctctacacgtttgagccggacatgctggatgatccctct
gagaagaagagcaagagggctacccccatgctgccaaaggatcccatcctggccgagatg
ctacagaacaacaaggatcagatagtgtgctatcatgagcatgactctctgctggaccac
aaggaggaggaagccctgagtgaggaggatcgcaaggcggcgtgggccgagtatgaagca
gagaagaagggtctgtctaccaggaccaactaccccatgtcctatgctcagccagatatg
ggcacctccaactacttctccttcaatatggcagctttggccacaatgtccaaccagcag
ctggaggatctcataagccaggggcgccagaaggtcattgaagcaacaaatgctttaaaa
gccctagctcgtgagacaatggaagacatcattgccagaatatggaaggaaaatccaact
ctcacagagaacgaggtccaggctttaactctgagacaccaagctaatgtggagattgag
ctgaagcgcagggaagccatttatagagacgtcctcaccaggcagcaaacgctgatgatg
tacgtacagaagctgatcaccaacagaaaggtgcaggagcaacaactggccatggccaac
caggccacctacctgaaccagctggccctgcagaacggcatgatggcaggcgggatgaac
cagatgaacctgctggggctttaccagcgcctccacggcatgggcggcaatcagagcgac
ggcaagaacccgggcccctcacagggcatgtag
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integrated database retrieval system
