Cyprinodon tularosa (White Sands pupfish): 119792539
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Entry
119792539 CDS
T07496
Symbol
lingo3a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3a
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ctul04131
]
119792539 (lingo3a)
Membrane trafficking [BR:
ctul04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
119792539 (lingo3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
LRR_14
ig
Ig_2
LRR_9
Ig_C17orf99
V-set
Cupin_1
LRRNT
LRR_6
Motif
Other DBs
NCBI-GeneID:
119792539
NCBI-ProteinID:
XP_038155135
LinkDB
All DBs
Position
Unknown
AA seq
667 aa
AA seq
DB search
IQCKNWKDTQKDLLPIVLPSDLQLTHRIKGDSIAVRAICQDPVIETQKEDRRRERKAMGI
YKGKNVCWHQPFFFLLLMITVSPTQSQGCPQRCDCITKLKTVSCFAKRLSSLPEGIPPDT
KVLDLSGNKLRWIEQDDLLPYSRLEKLELSDNMISVLEPNAFSSLQNLQTLSLRGNQLKL
VPMGAFSRLSNLTSLDLSGNKIVILLDYTFQDLKSLKNLEVGDNDLVYISNKAFLGLVGL
RELTIERCNLTSVSSQSLSYLHNLVTLRLRYLSISSLDDQNFRKLGNLRGLEIDHWPFLE
YISPHSLQGLNLSWLSITHTNITSVPTSALRSLAHLTILNLSYNPITVLESWGLRDLIRL
KELHLVNTNLAVVQPYALGGLRQIRLLNLSSNRLVTLEEGAFQSVNTLETLRLDRNPLAC
DCRLLWILQRRKTLNFDGASPVCIAPVEVQGQALSAFTDSALFDHFTCQKPKIRNRKLQQ
ISAREGQVVSFICRAEGEPTPIIYWITPQRRRITTKSSGRLTVLPEGTLEIRYAQVTDSG
TYICIASNAGGNDTYFATLTVSGLPLDAALMANRTYYAGDLNDTNLNDTKVFLKFTLDLK
TILISTAMGCIMFLGVVLFCFILLFVWSRGRGQHKNNFSVEYSFRKVDGPAASGGQGGAR
KFNMKMI
NT seq
2005 nt
NT seq
+upstream
nt +downstream
nt
tatacaatgcaagaactggaaggacacacagaaagatttattacccatcgtattgccatc
agatttacaactgactcataggataaagggagactcgatagctgtaagagccatttgtca
agacccagtgattgaaacccaaaaagaagacagaagaagagagagaaaggccatggggat
ttataaagggaaaaatgtatgttggcaccagcctttcttcttcttgctgctgatgatcac
agtgtcacccacccaaagtcaaggatgtcctcagcgttgcgattgcattaccaagctgaa
gactgtgtcctgttttgctaaacgcctttcctccctgcctgagggaatcccaccagacac
caaagtcttggacctaagtgggaataaactacgctggatagaacaagatgatcttcttcc
atattcacgcctggaaaaattagaacttagtgataatatgatcagcgtcctggagccaaa
tgcattttcaagtcttcagaacttgcagacactttctctaaggggtaaccagttaaaact
ggttccaatgggtgctttctcacgtctctccaacctcacctcattggatttaagtggaaa
taagattgtaattcttttggactacacttttcaggacctaaaaagtctgaagaatctgga
agttggtgacaatgacttggtttacatatctaacaaagcttttcttggtttggtaggact
cagggaactgacaattgaaagatgcaacctgacatcagtgtccagtcaatcattatctta
tctacataatctagtaactctgaggctccgatatcttagcatatcctccttagacgacca
gaattttcgaaaacttggaaatcttaggggtctggagattgatcactggccatttttgga
atacatatcccctcatagcctacagggtcttaatttgtcttggctgtccatcacccacac
caacatcacctctgtaccaacatctgcacttcgtagtctggctcacctcaccatcctcaa
tctttcttacaacccaataactgtgttggagtcttggggcctgcgagacctcatcaggct
gaaggagctgcatctagtcaacactaacctggcagtagtgcagccctatgcgcttggggg
tctgaggcaaatacggcttctgaatctttcaagcaacaggttggtaaccctagaggaggg
agcctttcagtctgtcaacactttggagacgcttcgtttggacagaaaccctcttgcatg
cgattgtcgtctgctctggatccttcaacgtaggaagaccctcaattttgatggtgcctc
ccctgtgtgtatagcccctgttgaagtccaaggacaggctctgagtgctttcactgactc
agctctatttgaccactttacctgtcagaagcctaaaatccgcaacaggaaactgcagca
gatatctgcacgtgaagggcaagtcgtttcatttatctgcagagcagaaggtgaacccac
accaattatatactggattactcctcagcgtcggcgcataactacaaaaagtagtggacg
cttgactgtattaccggagggcaccctggaaatacgttatgcccaggtaacagatagtgg
aacctacatttgtatagctagcaatgctggtggaaatgacacctactttgctacacttac
agtaagtggactgccgctggatgcagcactcatggctaaccgcacatattatgcggggga
ccttaatgacacaaatttgaatgacaccaaggtgttcttgaagttcacccttgaccttaa
aaccattcttatatctacagctatgggctgtatcatgtttctgggagtggtcctgttctg
cttcattttgctttttgtgtggagtcgggggagaggacagcacaagaacaacttctctgt
tgagtattctttcagaaaagttgacggacctgcagccagtggaggccaggggggtgcacg
caagttcaacatgaaaatgatttga
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