Cyprinodon tularosa (White Sands pupfish): 119792542
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Entry
119792542 CDS
T07496
Symbol
myo5c
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
119792542 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctul03019
]
119792542 (myo5c)
04131 Membrane trafficking [BR:
ctul04131
]
119792542 (myo5c)
03029 Mitochondrial biogenesis [BR:
ctul03029
]
119792542 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ctul04812
]
119792542 (myo5c)
Messenger RNA biogenesis [BR:
ctul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
119792542 (myo5c)
mRNA cycle factors
P-body specific factors
119792542 (myo5c)
Membrane trafficking [BR:
ctul04131
]
Others
Actin-binding proteins
Myosins
119792542 (myo5c)
Mitochondrial biogenesis [BR:
ctul03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
119792542 (myo5c)
Cytoskeleton proteins [BR:
ctul04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
119792542 (myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
Csm1_N
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
119792542
NCBI-ProteinID:
XP_038155147
LinkDB
All DBs
Position
Unknown
AA seq
1739 aa
AA seq
DB search
MALSELYTKYNRVWILDEEHVWKSAEITKDFHSGDNVLQLLLEDGTVHLYPVDPSKPNLP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFVESRIIYTYCGIILVAVNPYKQLPIYG
DAIIHAYSGQNMGDMDPHIFAVAEEAYKQMARNHKNQSIIVSGESGAGKTVSARYAMRYF
AVVSKSGSDTRVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFDRRYRIIGANMR
TYLLEKSRVVFQAENERNYHIFYQMCSCADSAEFKTLRLLSADEFRYTSMGGDVTIEGVD
DKKDMEETRRTFSLLGLKEDFQSDVFKVIAAILHLGNVEIRSSGDDRSSAPSNDPHLAAF
CDLLSVSPSELVRWLCHRRIVLVSETVVKPVPKERAMAARDALAKQIYAHLFDCIITRIN
TALQVPGKQHAFIGVLDIYGFETFDINSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKE
DIPWTLIDFYDNQPVIDLIEAKMGILDLLDEECLFPQGTDQSWLQKLYNYLEANPLFEKP
RLSNEAFVIQHFADKVEYQCRGFLEKNRDALYEELVDTMRASKFPFLANFFQEEEQSSAN
SKGVRVKAARPPVKPANKQLRTSVGNKFCSSLSLLMETLNATTPHYVRCIKPNDEKLPFE
YDSGRVVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYSILMSHLEADLTDKKETCKNV
LQRLIQDSNQYKFGRTKIFFRAGQVAYLEKLRLDRLRGACVTIQKHVRGWSHRRKYLRIR
EAAIILQQYIRGKRTIRKTVTAEILKQGWAVVVIQRHWRGYRTRQVYQILRLASITIQAF
TRGWMARKRYKKMMEEHKVVVLQKYAKAWLARRRFQTMRRLVLNVQLSYRVQQLRKKNEE
QNKENRGLMERLTSLASTHSQTMDRVRSQEAQLEKITNLKASAEERERKAREEANLTINQ
LQKQIEALKLEKENMEKKLEASIKETKESFDQVKMSLQEEKENEVRLRKIAENNIEIQRY
DNEKELETLKEEIKRLKEERVSLKRKMEEGAQVSSDLQEQVLQLTKHVKVIPELRRDMNN
LQNQRDNLDRRMKEQSEQTRAKTKEIIRQLLGGVVEEEKIGGFIPDDSEKIYEPDDLHEA
FEGLQKATRLMESHQREQKEMYESQLEGLSLKVDHLQNENSKLQNLFQEKSNINEDIRQE
VSRLSSENSVIPELKLQVSELQRQKQELDVVVKEQSCELAEKNNEISTILHKKIAEESTQ
RRHFEERAKELDETREQLQGRIEELEEENEHLKRQQLMEGEVKRKLREEASQLTAENMDL
EEQLDQKERCIKKLHKQIKSLKHSQRAKQNPALPKEYLGMLEYRREDEARLIQTIIIDLK
PKGVVVNVIPTLPAFLLFMCVRHADYLNDDNKLKSLMNSIIQGIKKVTAAYKEFESLSFW
LSNTYQLLNCLKQYSGEEEFQKQSTARQKKNCLQNFDLSEHRQILSDVAIQIYHQLISVM
QKTLMPTIVPGMLEHESLQGISSMKPTGFRKRSNSMYKDSEKYTISSILQQLSVFHSAMS
HHGMEQSLIKQVVKQLFFLVGATTFNHIMLCKDMCSCRKGMQIRCNISYLEEWLKENELQ
SSGGIDTLRPLAQAAWLLQVNKSTDEDAQEIAENCTELNPDQIVKILNSYTPIDDFEKRV
TSSFVRKVQSLLQEYEGSTQLMLDTDYRFQVTFPFCASSTALESLQVPSSLRLDFLTRI
NT seq
5220 nt
NT seq
+upstream
nt +downstream
nt
atggctttatctgagttatacaccaagtacaacagagtctggatactggatgaagaacat
gtttggaaatcagctgaaatcaccaaagacttccactcaggagataatgttcttcagttg
ctccttgaagacggcactgtgcacctctacccagtcgatccctccaaaccgaatctgccg
cctcttagaaacccagacatcctggtgggcgagaacgacctcacagccctcagctacctg
cacgagcccgcagtactgcacaacctcaaagtccgattcgtcgagtccaggatcatctat
acctactgtggtattattctggttgctgtaaatccttataagcagcttcccatctatggc
gacgcaattattcatgcctattcaggccagaacatgggagacatggacccccatatattc
gctgtggctgaggaagcctacaaacaaatggccaggaatcataaaaaccagtctatcatt
gtgagcggggagtctggagccggtaaaaccgtatcggcacgttatgctatgaggtacttt
gctgttgtgagcaaatctggaagtgatactcgagtagaagacaaagtgctggcttccaat
cccatcacagaggcaataggaaatgcaaaaaccacccgtaatgacaacagcagcaggttt
ggaaaatacacagagatcagttttgaccggaggtatcgaatcatcggagcgaacatgagg
acttacctcttggagaaatccagagtggtttttcaggcagagaatgaacgcaactaccac
atattctaccagatgtgctcctgcgcagactcagcagagtttaaaaccctcagactgctg
agtgcagatgagttcaggtacaccagcatgggtggagacgtaactatcgaaggcgtagac
gataaaaaggacatggaggagactcgtcgtaccttctcccttctgggtttaaaagaggac
tttcagtcagatgtgtttaaagttatagctgctattttgcatttggggaacgtggagatc
aggagctctggggatgacaggtcatctgctccttcgaacgatccccacctggcggcgttc
tgtgacttgctgtctgtgagtccatctgaactggtgcggtggctgtgtcatcgccggatc
gttctggtgagcgaaacggtggtaaagccggtgccgaaagagagagcaatggccgccaga
gatgctctggctaagcagatctacgcccacctgtttgactgcatcatcaccaggatcaac
acggcgctgcaggttccaggaaaacaacacgccttcattggtgttttggacatttacgga
tttgaaacatttgacatcaacagcttcgaacagttttgcatcaactatgcaaacgaaaag
ctccagcagcagtttaacttgcatgtcttcaagttggagcaagaggagtacatgaaggag
gacatcccctggacactaatagacttttatgataatcaacccgtcattgatctgatcgaa
gcaaaaatggggatccttgaccttctggatgaagaatgtttatttcctcagggaactgat
cagagctggttacagaagctgtataactacctggaagccaatcccttgtttgagaaaccc
aggttatcaaatgaggcatttgtgattcaacactttgcagacaaggtagaataccagtgc
agaggttttcttgagaagaacagagatgctctttatgaagaactggtggacacaatgaga
gccagtaagtttccttttctagcaaactttttccaagaggaggagcagagttcagcaaac
agtaaaggcgtccgagtcaaagcagccaggccacctgtgaaaccagccaataagcagctc
aggacctcagtgggaaataagttctgcagctccctgtctttactgatggagacgctgaac
gccaccacacctcactacgtgcgctgcattaagcccaatgatgagaaactcccatttgaa
tatgactcagggcgagtggtgcagcagctgcgggcctgtggagtactggaaactattcgg
atcagtgcacagagctacccatccagatggacatacattgagttttacagccgatacagc
atcctgatgtcacatttggaggcagacctcactgacaaaaaggaaacgtgtaaaaatgtc
ctgcagagattgattcaggactccaaccagtacaagtttggccgtacaaaaatcttcttc
cgagccggacaggtagcttacctggagaagctgcgtctggatcgactgcggggagcatgt
gtgaccattcagaagcatgtccgaggatggagccacaggaggaagtacctgaggataaga
gaggcagccatcatcctccagcagtacatccgaggaaagaggacaatccgtaaaacggtg
actgctgaaatactgaagcagggctgggctgtggtggtgatccagagacactggagaggc
taccgcaccagacaggtctaccagatcctccgtctggcctccatcaccatccaagccttc
accagaggctggatggccaggaaacgctacaagaagatgatggaggaacacaaagttgtg
gttctgcagaaatatgccaaagcgtggctggcccggcggcgctttcaaaccatgcgtcga
ctcgtgctcaatgtccagctctcctacagggtgcagcagctcaggaagaagaatgaggag
cagaacaaagagaaccgaggattgatggaaagactgactagcctggccagcactcattcc
caaacaatggacagagttcgcagtcaggaggcgcagctggaaaaaataaccaacctgaag
gcctctgcagaggaaagagaaagaaaagcaagagaagaagccaacctgacaattaatcag
cttcaaaagcaaatagaggctctaaagcttgaaaaggaaaacatggagaaaaagcttgaa
gcttccatcaaagaaaccaaggaaagttttgatcaagtgaaaatgagccttcaggaagag
aaagaaaatgaagtccgacttagaaaaattgcagaaaacaacatcgagatccagagatat
gataacgagaaagagctggaaactttgaaggaggagataaagcgattaaaagaggagaga
gtgagtctgaagaggaagatggaagagggagcacaggtgagctctgacctgcaggaacag
gtccttcagctcaccaagcatgtgaaggtcatcccagagctgcgcagagacatgaacaac
ttgcagaatcagagggataacctggaccgcaggatgaaggaacagtcagagcaaacaaga
gcgaaaaccaaggaaatcataagacagctgcttggcggtgttgttgaagaggaaaaaatt
ggagggtttattccagacgattctgagaagatttatgaaccagatgatttacatgaagct
tttgagggtcttcaaaaagctacaaggttaatggaaagccaccagagggagcagaaggag
atgtatgaatctcagctggagggcctgagcctgaaagtggaccaccttcagaatgagaac
agcaagctgcaaaatcttttccaggaaaaaagtaacatcaatgaggatattcgccaagag
gtgtccaggctcagcagtgagaactctgtcataccagagctgaagctgcaggtttctgag
ctgcagagacaaaagcaggagcttgatgtcgttgtcaaggagcagagctgcgagttagct
gagaaaaataatgagatcagcaccattctccacaagaagatcgcagaagaaagcacgcaa
cgccggcactttgaggagagggccaaggagctggatgagaccagggagcagcttcaggga
aggatagaggaactggaggaggagaacgaacacttgaaaagacagcagctgatggaggga
gaagtgaaaagaaagctgcgagaggaggcgtcacagttaaccgccgaaaacatggacttg
gaggagcagcttgaccagaaggagcgatgcatcaagaaactccataagcagataaagagt
ctgaaacactcacagagagcgaaacaaaatcccgctcttcctaaagaatacctcggcatg
ttggagtataggagggaggatgaagcaaggctcattcaaactatcatcatagacctgaag
cccaaaggtgtggtggtcaacgtgatcccgactctgccagctttcctcctgttcatgtgc
gtccgtcatgccgactacctgaatgacgacaacaaactgaagtctctgatgaattccatc
attcaagggatcaaaaaagtcactgcggcttacaaggaatttgaatctttgtccttctgg
ctctccaacacataccagctgctcaactgtctaaaacaatacagcggggaggaggagttc
cagaaacagagcacagcgcgtcagaaaaagaactgcctgcagaactttgatttgtccgaa
cacagacagattctcagcgacgtggccatacagatctaccatcagctcatctctgtcatg
cagaagaccctcatgcctactatcgtgcctggtatgttggagcatgagagcttacaagga
atttctagcatgaaaccgaccggctttaggaagcgttccaacagtatgtataaggactca
gagaaatacaccatctcctccatcctgcagcagctgtctgtcttccattctgccatgagc
caccacggcatggagcagagcctgatcaaacaggtcgtcaaacagctcttcttcctggtt
ggcgccaccaccttcaaccacatcatgctttgcaaagacatgtgctcttgcaggaaaggg
atgcagattagatgtaacatcagttacctggaagagtggctgaaggagaatgagctccag
agctccgggggcatcgatacgttgaggcctctggctcaggctgcctggctgctgcaggtc
aacaagtccactgatgaagacgctcaagagattgcagaaaattgcactgaactaaaccct
gatcagattgttaagattttgaattcctacacacccatagatgattttgagaagcgagtg
acctcatcgtttgtccgcaaagttcagtccctcctccaggaatatgaaggctctacacag
ctgatgctggacacagattatcgcttccaggtgacgtttcctttctgcgcctcatcaaca
gctttagagtccctgcaggttcccagcagccttcgtctggacttcctgactaggatttga
DBGET
integrated database retrieval system
