Cyprinodon tularosa (White Sands pupfish): 119792548
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Entry
119792548 CDS
T07496
Symbol
si:dkey-110c1.10
Name
(RefSeq) unconventional myosin-Va
KO
K10357
myosin V
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
119792548 (si:dkey-110c1.10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctul03019
]
119792548 (si:dkey-110c1.10)
04131 Membrane trafficking [BR:
ctul04131
]
119792548 (si:dkey-110c1.10)
03029 Mitochondrial biogenesis [BR:
ctul03029
]
119792548 (si:dkey-110c1.10)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ctul04812
]
119792548 (si:dkey-110c1.10)
Messenger RNA biogenesis [BR:
ctul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
119792548 (si:dkey-110c1.10)
mRNA cycle factors
P-body specific factors
119792548 (si:dkey-110c1.10)
Membrane trafficking [BR:
ctul04131
]
Others
Actin-binding proteins
Myosins
119792548 (si:dkey-110c1.10)
Mitochondrial biogenesis [BR:
ctul03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
119792548 (si:dkey-110c1.10)
Cytoskeleton proteins [BR:
ctul04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
119792548 (si:dkey-110c1.10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
AAA_22
Myosin_N
NPHP3_N
AAA_16
P33MONOX
Motif
Other DBs
NCBI-GeneID:
119792548
NCBI-ProteinID:
XP_038155156
LinkDB
All DBs
Position
Unknown
AA seq
1654 aa
AA seq
DB search
MATLELYTKGAGVWVPDPEAVWVSATLLRDYKPGEEQLLLKLQNGNEVHYLVQSSSDLPP
LGNPDILEGENDLTALSFLHEPAVLHNLRVRFLDYSSIYTYCGIVLVAINPYDQLPIYGE
EVIDAYSGQDMADMEPHIFSVAEEAYRTMIREERNQSIIISGESGSGKTVSAKFTMRYFA
VVGGAAQQTSVEERVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFGRKGDIIRANMRT
YLLEKSRVVFQASSERNYHIFYQLCAARERPEMRSLKLEPPEYFRYTKQGGEMQIPGTDD
LSDLERTRNAFTILGVQPEQQMELFRILSAVLHLGNVNIQASGRSSDRSYIDAEDRSLAV
FSKLLGVERAQMAHWLCSRRLAVGGEMLVKPMTGQQALEARDALAKHIYGQLFTWTVRRL
NSALQSQKGKAKSFIGVLDIYGFETFDQNSFEQFCINYANEKLQQQFNRHVFHLEQEEYV
REELAWNRIEFSDNQECISLIEGPLGIFDLLDEECRMPKGSDENWARKLYDHHLTSKPNP
HFQKPRMTNNAFIVFHFADTVQYECSGFLDKNRDTVFEELINILKASQSELVAELFQQLG
GAPSVANGSVRSGKRASREHKLTVGFQFRQSLQMLMETLNSTTPHYVRCIKPNDLKAPFL
FDPKRTVQQLRACGVLETIRISAAGYPSRWTYEEFFSRYRLLLRGNQNQDQAQASCRQAL
PQLIPDTDQYCFGKTKVFFRAGQVAVLERLRAERLRAAAVVIQSLVKGWLARIRYRRIVW
AAATIQRYIRGAMARRLALTLRYTKAAIVIQKTFRMLVVRQLFLMIRESTITIQAFTRGT
LARRRYKQLVAERAAVMLQARVRGWLARRAYQRVLAAVVFMQCCVRRKASRRELLRLKAE
ARSVERYRELNKGMEVKLMQLQLRVDQQTRESAALRETLKAEREAAGAELGALRGIIQKL
ESKKQEKPPPSPVINEKEMEERRRAEEKAAQEILRLKQELQELQRDKEEVCKEKEDLTAL
LHEKEKTQEEFVQKAVLQASAALQSELDEEKMKYQGLLREFSRLEQRYDNLREMNLLSER
AMGHRRTDSALSLNFEPLSPTSTPRSVSPFPSAFPSPEEQRRISVTSPTLERGLSVCSSE
GPLDQLMEKMDVAKDPAVKKKVEDLEYAYDAVRVANKFLESQLQKQQSQWKEEVEVLKNQ
LSQTICSASSAAKKRYLWELLEAREFECMRLRRELKELRNMTGLRHLLTQVSSSAPTTET
ICPAQLKPAAVSGLLECRKRDETKLIKNLITDIRPECALDLPPGLPASVIFLCIRQADCS
GDQARAHSLCSAALVAMKAALKKQTNDLDMTALWLKNVSLLHDLLVQHSSKQGLESDDLV
SMTTDLKDLIRSLSDLCIQAYQQLLSITETLLQKLIVPALLESETIAGLSGSAVKQVVSR
RRAGSDPRPLGADAPTMASVLRQLRTLHSAMSRQSLPHSLTEQAFKQMTYLICACALNNL
LLRKDVCSWSRGMQIRYNVSVLEEWLRSRSLQAGGAVATLEPLIQAAQLLQVGKKTDADA
QAIVRTCTALSSTQIMKILTLYTPHSDLDEKVSINFIRSVQELAKGRSDSQPPQLLMDVR
RVFPVTFPYSPPTALSAEELVIPDSLKISFLRKA
NT seq
4965 nt
NT seq
+upstream
nt +downstream
nt
atggcgactctggagttatacacaaagggtgcaggtgtgtgggtccctgacccagaagca
gtttgggtgtccgccaccctcttaagggactataaacctggagaagagcagctgctgctg
aagctccagaatggaaacgaggtgcattacttggtccagtcgtcgtctgacctccccccg
cttgggaacccagacatcctggagggggagaacgacttgacagctctcagcttcctacat
gagcctgctgtgctgcataacctccgagtccggtttctggactacagcagcatctacaca
tactgtggtattgtattggtggccataaatccctacgatcagctcccaatatatggtgag
gaggtgatagatgcttacagcggtcaggacatggctgacatggagcctcacatcttctct
gtggctgaggaggcctaccgcaccatgatcagggaggagaggaatcagtccattatcatc
agtggggagtctggctcagggaaaacggtttcagccaaatttaccatgcgatactttgct
gtggttggaggagcagctcagcagaccagtgtggaggagagggtgctggcatccaacccc
atcatggagtccatagggaatgctaaaaccactcgcaatgacaacagcagccgctttggg
aagtacatagagattggttttggcaggaagggggacatcatcagggctaatatgcggaca
tacctgctggagaagtcgagggttgttttccaggcatcgtcagagagaaactaccacatc
ttctatcagctgtgtgcagccagagaacggcctgaaatgagatcactcaaactggagcca
cctgaatatttccgctacacgaagcagggaggagagatgcaaattcctgggacagatgat
ctgtcagatctggagcgtactcgcaatgctttcaccatcttaggagtgcagcctgaacaa
caaatggagctcttcaggatcctgtcggctgttctacaccttggaaacgtcaacattcaa
gccagcgggagaagctctgacagaagttacatcgacgcagaggaccgctctctggccgtc
ttttccaagctgttaggagtggagcgagctcagatggctcactggctgtgcagccgcaga
ctagcggtagggggggagatgttggtgaagcctatgactggtcagcaggctctggaagcc
agggatgctctcgctaaacacatctacggtcagctgttcacctggacggtccgaaggctc
aactcagccctgcagtcgcagaaggggaaggcgaagtctttcataggagtgttggatatc
tatgggtttgagacctttgatcagaacagctttgagcaattctgtataaattatgcaaat
gaaaaactacagcaacagtttaacaggcatgtgttccacttggagcaggaggagtacgtc
cgcgaggagctggcctggaatcggattgaattcagcgacaaccaggagtgtatcagtctg
attgaaggtcccctgggaatatttgacctgttagatgaggagtgcaggatgcctaaaggc
tctgatgaaaactgggcacgaaagctgtacgaccatcacctgaccagtaagcccaatcct
cacttccagaaacccaggatgacaaacaacgccttcattgttttccactttgctgacaca
gtgcaatatgaatgcagtggcttcctggacaagaacagagacaccgtgtttgaggagctt
attaacattctcaaagcaagtcagtctgagctggtggctgagctgttccagcagctggga
ggtgctccgtctgtggccaatgggagtgttcgctctgggaaaagagcttccagagagcac
aagctcactgtgggctttcagttccgtcagtccttacagatgttaatggaaactctgaac
agcaccacccctcactatgttcgctgtattaaacccaacgacctaaaagcaccttttctg
tttgacccaaagaggacggtgcagcagctgagagcctgtggcgtgctggagaccatccgt
atcagtgcagcaggttatccatccagatggacatacgaagagttcttcagcaggtaccgt
cttctcctccgtggaaaccagaaccaggaccaggctcaggcctcctgcagacaggccctg
cctcagctgatcccagacacagaccagtactgctttggaaagaccaaagttttcttccga
gcaggtcaagtggctgtcctggagaggctgagagctgagaggctgcgtgccgctgctgtg
gtcatccagagtctggtcaaaggctggttggcacgaatcagatacaggaggatcgtctgg
gcagctgctaccatccagagatacatacgaggagctatggccaggagactggctctgacc
ctgcgctacactaaggctgccattgtgatccaaaagaccttccggatgctggtggtcaga
cagcttttcctcatgattcgggagtccaccatcaccatccaagccttcaccagagggacg
ctggcccgtcgtagatacaaacagctggtggcagagagggctgcagtgatgcttcaggcg
agggttcgtggttggcttgcgaggcgggcgtaccagcgggtgcttgccgcggtggtgttc
atgcagtgttgcgtacgccgcaaggccagcaggagagagctgctgaggttgaaggctgag
gctcgctcagtggagcgctacagggagctcaacaagggcatggaggtgaagctgatgcag
ctccagctgagagtagaccagcagacaagggagagtgctgctctgagagagactctcaag
gcggagcgagaggctgccggtgctgagctgggcgctctgagggggataatccagaaactt
gaaagcaagaaacaggagaagcctcctccttccccagtcatcaatgagaaggagatggag
gaaaggaggagagcagaagaaaaggcggcacaggagatccttcgacttaaacaggagttg
caagaattacagcgagacaaggaggaagtttgcaaggagaaggaagatcttactgctctc
ctacatgagaaagagaaaacacaagaagagtttgtgcaaaaggctgtacttcaggccagc
gcggctctacagtccgaactggatgaggagaagatgaagtaccaaggtctcctgagggag
ttcagccgactggagcagagatacgacaacctgagggagatgaacctgctctctgagagg
gccatgggacacagaaggacagactcggcactgagtctgaactttgagcctctttctcca
acctccactcctcgctcagtatcccccttcccatctgcgttcccttccccggaggagcag
cgcaggatcagcgtgacgtcccccactctggagagggggctttcggtatgcagctcagaa
ggaccactggatcaactgatggagaagatggatgtggccaaagacccagctgtgaagaag
aaagtagaggacctggagtatgcctatgatgccgtacgagttgccaacaagtttctggag
agccagctgcagaagcagcagagtcagtggaaggaagaagtcgaggttctgaagaaccag
ctcagccagacgatctgctctgcttcctctgctgcaaagaaacggtatctgtgggagctt
ctagaagccagagagtttgagtgcatgaggctgcggagggagctgaaggagctgagaaac
atgacgggtctcagacatctgctgacgcaagtttcttcgtcagctccgactacagagacc
atctgtcctgctcagcttaaaccagcagcagtctctggtttgctggagtgcaggaaaaga
gacgaaaccaaactcatcaagaacctcattacagacattcgacctgaatgcgcgctggat
ctgcctcccggtctaccagccagcgtgatcttcctctgtatccgtcaggccgactgcagt
ggagaccaagctcgagctcactccctgtgcagcgctgccctggtggccatgaaggctgcg
ctgaagaagcaaacaaatgatctagatatgactgctctgtggctgaaaaatgttagtcta
ttgcatgacctgttggtccagcactcctcgaaacagggtctggagtcagatgacctggtt
tccatgacaaccgacctgaaggacctgatccgttccctgagtgacctctgtatccaggcc
tatcagcagctgctgtccattactgagacactgctgcagaaactcatagtcccagcgctt
ctagagagcgagaccattgccggtctgtccggctctgctgtgaaacaggttgtatccagg
agacgggcaggctcagaccctcgaccgcttggagccgacgctcccaccatggcgtctgtg
ttgaggcagctcagaacccttcactcagccatgagccgccagtccctgccccacagtctg
acagagcaggcttttaagcaaatgacctacctcatctgtgcctgtgctctcaacaacctg
ctgctgaggaaagacgtgtgctcctggagtcgtggcatgcaaatacgctacaatgtcagt
gttcttgaggaatggctgcgcagccgtagtctgcaggcaggtggcgctgtggccacactg
gagcctctcatccaggcagctcagctgctgcaggtggggaaaaagactgatgcagatgct
caggctatagtccggacctgcactgctctctccagcacccagattatgaagattctgacc
ctgtacactcctcacagtgaccttgatgaaaaagtctctataaatttcatccgtagcgtc
caggagctcgccaaaggccgttctgacagtcagcctccgcagctcctgatggacgtgaga
agagtgttccctgtcacttttccctactcacctcccactgccctcagtgcagaggaatta
gtcatcccagactccctcaagatctcttttctacgcaaagcctaa
DBGET
integrated database retrieval system
