Cyprinodon tularosa (White Sands pupfish): 119792637
Help
Entry
119792637 CDS
T07496
Symbol
focad
Name
(RefSeq) focadhesin
KO
K27498
focadhesin
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctul03019
]
119792637 (focad)
Messenger RNA biogenesis [BR:
ctul03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
119792637 (focad)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Focadhesin
DUF3730
Motif
Other DBs
NCBI-GeneID:
119792637
NCBI-ProteinID:
XP_038155293
LinkDB
All DBs
Position
Unknown
AA seq
1800 aa
AA seq
DB search
MTESFRTRLDFCSPVIQAQAVRNLVAAVLKEKDSNEQISQSSTQGPALEALWQQCCGDSA
PVRSACCDAVVLLVAQGHAELQFILNSVLNLLPSARNVQGLIKVMGRLLQMQVDQRQEDS
PFICPYSIRSCPHPFITALENRADCWPALLLEIDDFIRQAAERSEASYITMLVPFLRYLY
CEPQRQSQHALLRQSLLRVLLPTKAADKEQEKAAAVYESLLLCLCQLVPHFQVDSVEAVL
ELSGFVDILLQGLMEASGELWETERVRLLVQLLCACHQCLRVNGDCRPLLNLMQQLLPAC
KVCPVDELMMGVALLLPEAPALQQSSLLRLALTLAPEEEEWSPWPSPVLLLPVLQLLSCS
QLTEPLADPSTHGLNERLAHSLLRSISKPTKKARRPGPTLALPLSSWYWELSAALSILFK
VDDDPSAATDWLLAVTSGLPSSQRLSSSLALIVTYLLITAREDICLLALKAVQTIAAADP
CQVPSLLPVLLFKLSKETNAGSIHAVLNCLPNLGTHKLCVPMVLQTLHMLASSPKLRAVA
MRLMAALWKRQDRVYPELQRLLSQQDTRVLVGKDAQWEQILARAACIRDVCRERPYQHGG
DMLAAISLTLQQCSRADLATPAALVLQGLQELCRAEVVDIVSTWRSLAAELRRDSRPAMV
KAIAELLSLVPQLAVKSEEYEKLKDEAVSFLWSYAGSQDPEVSSCGYKALAAFPETTHTI
LHLPEAARPVVKISEGEDDGDEKDKGEEEDLSIPGSSYMKLMALTSTSALPAFELFLTSL
VKQEMSVMPRGVYFSALRSGSLRSDQGKTVSGIPSFVLKTYEKNKQPGLKPGLAAGLLLC
YELPVQTDRSGKPFDRFLVSRSRSYQQTLMALIHEVNIQPSEWHRALLLPQAWRGFMSRS
FHAVLQGRRADLEMQQKQGKEEPQELQYKQHCAWLWARDQLTDVIKTAIKDSPVVQGNSI
LTLSGLAAVVAKYESNLPTDSSGSLGAGPEFVPTSSWLSMVLDTLLSISSSSYKARGQVF
PWFLHRSYSGENTASAIARSCASLALSLLVPVLVVWQRDGLVQVLSALQAGLPGSPSADD
SQAVQFHSGLALGMVLSSLHHQCLRDTSAQEDMDLLSSSLDALESCCFNPNLEYNTGCVL
GLGLALSALCSRGQVEQQVHVTRTLDKLLANLQDSGGQGRMLQEVLSYSVACVSVSAFSG
GLIDAAKAEEVLNSLRALTEESQQTPGFSLALGLVVHGLSVSGHGKAEDIQPRLLAAWIQ
ILLAESCPTMQRLAAANGLVALVGSESGLIQFQNELELSSQQQSRLNEVIRGITQIITFS
GAIGLQSNCACLIGHLHLAHMSSSHSHTAVPQDFSYLPVKSVIRSITDFITEAGKKGPEV
SSPALVRTALTPLASVGAAFQYPPVNWSAVLSPLMRLSFGEDIQHQCVVLAACQAQSSQS
ASLFLGSWLSPPLVHSLSLRTRAHLYESLGVWMKHVAEDKLQVFVKSLGLQQFQDDVRTQ
RLSLCRSLLTGVAQAMALPNPPNHCWAVLCSSAEKIFLLLPNQIQDAEVDLYVGVARCLS
EMSDTEIDRIVQVSQAQMEKTCFVLAYLTSQGRVPLLSLNDVIGGVLRGWPGCRVGWILL
QALYQCRLAAGAATGVSKRMEWLLELMGHIRNIGYGNTSVSCGDSKLATDFLFQLFAAAV
VSWGDRFMPVLYGLRSQWFPWQPESKPPLLTHSLYGADPLSDLALPQCLLGVHHSLPLLL
DKEPWSGQRHKFIDWLLSISEGPEENISATAVGSARAALLSLKSSSEFRKKAVWTRAYGW
NT seq
5403 nt
NT seq
+upstream
nt +downstream
nt
atgacggagagtttcaggacccggctggatttctgcagccctgtgatccaggcccaggcg
gttagaaaccttgttgctgctgtgctgaaggaaaaagactcgaacgagcaaatcagtcag
tcgtccacgcagggcccagcgttggaggctctgtggcagcagtgctgcggcgactctgct
ccggtgcgttcagcctgctgtgatgctgtggtgcttttagtagctcagggccacgctgag
ctgcagtttattctcaacagcgtcctcaatctcctgccctctgccagaaatgtccagggg
cttataaaggtcatgggaagactgctgcagatgcaagtggaccaaaggcaggaggactcc
cccttcatctgcccctactccatcaggagctgtcctcatccgttcatcacggcgctggag
aaccgagcggactgctggccggcgctgctgctggagatcgatgacttcatccgccaagcc
gctgaacggagtgaagcctcttacatcaccatgctggttcccttccttcggtacctgtac
tgtgaacctcagaggcagtcccagcatgccttgctgcggcagagtcttctccgggtgctg
ctgcccacgaaagcagcggacaaggagcaggaaaaggctgcggcggtgtacgagagcctg
ctgctttgcctctgtcagctggttccacatttccaggtggacagtgtggaggcggtgctg
gaactgagtggattcgtggacattctgcttcagggtctcatggaagcttctggagagctc
tgggagactgagagggtccgtctgctggtgcagctgctgtgtgcatgtcaccaatgcctg
agggtgaatggagactgcagaccgctcctcaacctgatgcaacaactactgcctgcatgc
aaggtttgtccggtggatgagctgatgatgggggtggccctgcttctgcctgaggcccct
gcacttcagcagagcagcctgcttagacttgcgctgactttagcccctgaagaggaagag
tggtcgccctggcccagtccggttctgcttctgcctgttttgcagctcctgtcctgctca
cagctcaccgagccgctggccgatccatcaacgcacggcttaaacgagcgtctggcacac
agcttgttacgcagcatcagcaaacccaccaaaaaggcccgacggcccggcccaacattg
gcgctccctctcagctcctggtactgggagctcagcgcggcgttgtccatattgttcaaa
gtcgatgatgatccgtccgcagccaccgattggctgctggctgtgacctcgggcctaccg
tccagccagcgtctgtcctcgtccctcgcactcatcgtcacctaccttctcatcacggcg
cgggaggacatctgtctgctggcactgaaagcagttcagaccatcgctgctgccgacccc
tgccaggtcccttccctgcttcctgtcctgctgttcaaactgtcgaaggaaacaaacgca
ggttcgattcatgctgtgctgaactgcctgcccaacctcggcactcataagctttgcgtc
cccatggtgctgcagactctccacatgctggccagttcccccaagctgagagccgtcgcc
atgcgcctgatggcggctctctggaaacgacaggaccgagtctacccagagctgcagcgt
ctgctgagccagcaggataccagagtgctggtggggaaggacgcccagtgggagcagatc
ctggccagagcggcgtgcatcagggatgtctgcagagaaaggccctaccagcatggaggc
gacatgctagccgctatctcactcaccctgcagcagtgcagccgagccgacctggccacc
cctgctgctctggtcctgcagggcttacaggagctttgcagagcagaggtggtggacatt
gtttctacatggagaagcctcgcagcagaactgaggcgagactcccgtccagcgatggtt
aaagccatagcagagctgctgtctttggttcctcagcttgcagtcaagtcagaggagtat
gagaaactgaaagatgaggcggtcagctttctgtggagctacgctggaagccaggatcca
gaggtgtccagctgtggctacaaagctctggcagcttttcctgaaaccactcacaccatc
cttcacctcccagaggcagccagacctgttgtgaagatcagcgagggcgaagatgatggt
gatgaaaaggataaaggagaagaagaagatctctccatccctggatcgtcctacatgaag
ctaatggctctgacctccacctctgctcttccagcctttgagctcttcctgacgtcgctg
gtgaagcaggagatgagtgtgatgccacgaggagtttatttctctgctctgaggagcggc
agcctgcgatcagaccaaggaaaaacggtttctgggattccatcgtttgttctgaagact
tacgagaaaaacaaacagcctggcctaaagccagggctagcagctggactgctgctctgc
tacgagctccccgtgcagacagaccgcagcgggaagccgttcgaccgcttcctcgtgagc
cggagccgcagctaccagcagaccctgatggctctcattcacgaagtgaacatccagccc
tccgagtggcaccgtgccctgctgctcccccaggcgtggaggggcttcatgagccgatcc
ttccacgctgtccttcagggccgacgggctgatctggaaatgcagcagaaacaaggcaaa
gaggagccccaggagctgcagtacaaacagcactgtgcctggctgtgggctagagatcag
ctgacggatgttataaaaactgctataaaggacagtcctgttgtccagggaaactccatc
ctgactctaagtggtctggctgctgtggtcgccaagtatgagagcaatctgcctactgac
agcagcggcagcctcggggccggccctgagtttgtgcctacttccagctggttgtccatg
gtactggacaccctgctgagcatcagcagcagcagctacaaggccaggggacaggtgttt
ccatggttccttcatcgatcgtactccggtgagaacacggcgagcgccatcgcccgctcc
tgcgctagcctggccttgtcgctgctggtcccggttctggtggtgtggcagagggacggt
ctggtccaggttctgtcagccctgcaggccggcctgccgggctcgccctccgcagacgac
tcccaggccgtccagttccactcgggtcttgctctcggcatggttctctccagtctgcac
caccaatgtctccgggatacctctgcccaggaggacatggatctcctttccagctctctg
gacgctctggaaagctgctgcttcaaccccaacctggaatacaacaccggctgcgtgttg
ggcctaggcctcgcgctctcagccctctgcagcagaggccaggtggaacagcaggtccac
gtcaccagaacccttgacaagctactggctaacctgcaggacagcggcgggcagggtcgc
atgctgcaggaggtgctgtcgtactctgtggcctgtgtgagcgtctcagcattcagcgga
ggtctgatcgatgctgccaaggctgaggaggtcctgaacagtctgcgcgccctgaccgag
gagagccagcagactccaggcttctcattggctctcgggctggtcgtccacggcctctct
gtgtccggccacggcaaagcagaggacattcagccccgcctgctggctgcttggatccag
atcctcctggccgagagttgtcccacgatgcagcgactggctgccgctaacggactggtg
gctctggtgggatcagagagcggcctgattcagtttcagaatgagttggagctttcctcc
cagcagcagagcagactcaacgaggtgatccgcggcatcacgcagattataaccttttct
ggggccattggcctgcagtccaactgtgcctgcctgatcggccatctgcatctggcccac
atgtccagcagtcacagccacacagcagttcctcaggacttcagttacctcccggtgaaa
agcgtcatccgctccataacggacttcattacagaagcggggaaaaaaggtccagaggtt
tcctctccggctctggttcggaccgctctgacccccctggcgtctgtaggagctgccttc
cagtatccgccggtgaactggagcgccgtcctgtccccgctgatgagactgagcttcgga
gaagatatccagcatcagtgtgtggtcctggcagcgtgccaagctcagtcttcccaaagc
gcctccctcttcctgggctcctggctgtctccacctctcgtccacagcctcagccttcgt
actcgagctcacctctacgagtccctgggcgtgtggatgaagcacgtggcggaggacaag
ctgcaggtgttcgtgaagagcctgggcctgcagcagttccaggacgacgtgcgaacccag
aggctgtctctgtgtcgctctctgctgacgggcgtcgctcaggccatggccctccccaac
ccgcccaaccactgctgggccgtcctctgctcgtccgcagagaagatcttcctcctcctg
cccaatcaaattcaggatgcagaggtggatctgtacgtgggcgtcgccaggtgtctgtct
gagatgtccgacacagagatcgacagaatcgttcaggtctcgcaggctcagatggagaag
acctgttttgtcctggcgtacctgacctctcagggcagggttcccctcctcagcctcaac
gatgtgatcggcggggtgctgcggggttggcccggctgcagagtgggctggatcctcctg
caggctctgtaccagtgccgcctggctgccggcgccgctacaggtgtttccaaacgaatg
gagtggctgctggagctgatgggacacatccggaacatcggctatgggaacacatccgtc
tcctgtggagactccaaactggcgacagacttcctgttccagctctttgccgccgccgtc
gtttcctggggcgaccgcttcatgcccgtcctctatggcctcaggtcccagtggttcccg
tggcaaccggaatccaagcctccgctgctgacgcacagtttgtacggagcggatccgctc
agcgacctcgctctgccgcagtgcctgctgggagttcaccacagcctgccgctgctgctg
gacaaggagccgtggagcggccagaggcacaagttcatagactggctcctcagcatctca
gaaggtcctgaggagaacatttcagcgaccgccgtcggctcagccagagcggctctcctg
agtctgaagtcctcctccgagttcaggaagaaggcggtgtggaccagagcgtacggctgg
tag
DBGET
integrated database retrieval system
