Cyprinodon tularosa (White Sands pupfish): 119792665
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Entry
119792665 CDS
T07496
Symbol
nvl
Name
(RefSeq) nuclear valosin-containing protein-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
119792665 (nvl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ctul03009
]
119792665 (nvl)
Ribosome biogenesis [BR:
ctul03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
119792665 (nvl)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_16
AAA_2
AAA_5
AAA_14
AAA_22
NPHP3_N
TIP49
AAA_33
AAA_28
Mg_chelatase
RNA_helicase
AAA_17
Nucleolin_bd
nSTAND3
ATPase
Rad17
TsaE
AAA_18
NACHT
ABC_tran
Viral_helicase1
AAA_3
Zeta_toxin
IstB_IS21
Vps4_C
nSTAND_NTPase5
Sigma54_activ_2
Motif
Other DBs
NCBI-GeneID:
119792665
NCBI-ProteinID:
XP_038155329
LinkDB
All DBs
Position
Unknown
AA seq
934 aa
AA seq
DB search
MGFLRYIERSTGFASGCLGLLLALLTFRRTLVDFSISELRNCCPGARCRFHGERNVAFSE
SSGTNRNPAWFCSVKKFCPHPDEEQRRRRLDGHSPEATSGAVYGLQQQRICGPCRNGRGP
SETVQQHSLPPEWVSRSTPCCLSGSAAEHFCGSALRMDYGRRNKTAFRIQVEKVFKAVKE
EVELNDLESKHLAKRARSSCNETRDSSSSSEDSSDSDEQVLGNTPNSSVTALYRKGPTAA
GRANPAQNEGTVVSPGGWFIDKGRGPTTRPVFIDFSKDESVDTQANRGASQLEPETKRSK
KRSKNSAHSADSQGVIKNKKAKSKSPELQYPHLRFEDVGGNEEILTEVCKLLVHMRHPEV
YQHLGMVPPRGFLLHGPPGCGKTLLAQAVAGELQIPMLKVSAPELVSGVSGESEQKLREL
FELAMTSSPCIVFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNSLTVTAQVLVIGA
TNRPDSLDPALRRAGRFDREICLGIPDEGARLRILRTLCRKLTLPADCNYQQLARLTPGY
VGADLMALCREAAMAAVNRVLLETRPLAQTPPDCPEQPSGSPEQMEAGTDVVVRTEQEGE
LQQLLGILKNTDTLSEQELAGLCILMSDFQDALGRVQPSAKREGFATVPDVTWENVGALQ
DIREELTMAILAPVRSPEQFRALGLSAPSGVLLAGPPGCGKTLLAKAVANESGLNFISVK
GPELLNMYVGESERAVRQVFQRGRNSAPCVIFFDEIDALCPRRSGHESGASVRVVNQLLT
EMDGLETRKQVFIMAATNRPDIIDPAVLRPGRLDKTLYVGLPCAADRHAILMTVTKGGTR
PQLEQDVRLEDIAFDERCSSFSGADLTALVREASVNALKVFMKSQLSGQTHPSGSTADIK
VTKQNFEDAFKTIQPSVSKKDQLMYERLRESLSR
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgggatttctgaggtacattgaacgcagcaccggttttgcttccgggtgtttggggtta
ctgctcgcgctgctcacgtttcgaagaacgctggtggacttctccatctctgagctgaga
aactgttgtcctggagcccggtgccgtttccatggtgaaaggaacgtagctttttcggaa
agttcgggaaccaacaggaaccccgcgtggttctgttcagtaaaaaagttttgtcctcat
ccagatgaagaacagaggaggaggaggctggatggacactcgcctgaagcaacgagtgga
gcagtatatggcctccagcagcagcgaatatgtggaccttgcagaaatggccgtggacct
tcagagacagttcagcagcactccctgcctcctgagtgggtcagccggtccactccctgc
tgcctcagtgggtcagccgctgaacacttctgtggttctgccctcaggatggactacgga
cggagaaacaagacggcctttaggatccaggtggagaaagttttcaaggccgtcaaagag
gaggtggagctgaacgacctggaaagcaaacatctggccaagagagcccggagcagctgc
aatgagacccgggacagcagcagcagctcggaggactcctcagacagcgatgaacaggtg
ctgggaaacacgcccaacagttcagttacagccctgtaccgtaagggccctactgcagca
ggcagagccaacccagctcaaaatgaaggcaccgtagtttcccctggaggctggttcatt
gacaaaggcagaggccccacgacacgacccgtcttcatcgacttttcgaaagacgagtca
gtggacacacaagcaaatagaggtgcatcccaactggagcctgagaccaagaggtcaaag
aagaggtcaaagaactcggcccattctgcagactcccagggagtgatcaagaataagaaa
gcaaagtccaagtccccagagctgcagtatccccacctgaggtttgaggatgttgggggt
aatgaggagatcctaacggaggtgtgcaagctgctggttcatatgcgccacccagaggtc
taccagcacctcgggatggttcctcccaggggcttcctgctgcacggacctcctggctgt
gggaagaccctgctggcccaggctgtggctggggagctgcagatccccatgctgaaggtg
tctgctccagagctggtatctggggtgtcaggagagtcggaacagaagctcagagagctg
tttgagctggctatgacctccagtccatgcattgtgttcatcgatgagatagatgccatc
acgcctaagagagaggtggcctccaaagacatggagaggaggatcgtggcccagctgctg
acctgcatggacgatttgaacagtctcacggtgacagctcaggtactggtgatcggcgcc
accaacaggccggactccctggatccggccctccgcagagccggccggtttgacagagaa
atctgtctggggatccctgatgagggcgctcggctcaggatcttgaggaccttatgtcgg
aagctgacactgcccgcggattgcaactaccagcagctggcccggctcactccaggctac
gtgggagctgacctcatggctctgtgccgggaagctgctatggctgccgtgaaccgggtt
ctgctggaaaccaggccattggcccagactccgccggactgccctgaacaaccgtcagga
agtccggagcagatggaggctgggacggatgtggttgttagaactgagcaggagggagaa
cttcagcagctccttggcatattgaagaacacggacacgctgtcagagcaggagctggct
ggactctgcatcctcatgtccgactttcaggacgctctgggccgggttcagccttcagcc
aagagggagggcttcgccacagtaccagacgtgacctgggagaacgtaggagctctgcag
gacatcagggaggagctcaccatggcaatactggctcctgtccgatctccggagcagttc
agagccctggggctcagcgcaccatctggggttctgctggccgggcctccaggctgtggg
aagaccctgctggctaaggcggtggcaaatgagtcaggcctcaacttcatctccgtcaaa
ggtccagagctgctaaacatgtatgtgggggagagcgagcgagcggtccgccaggtcttc
cagagaggacgcaactctgctccttgtgtcatcttcttcgatgagattgacgccctgtgt
cctcgccgttcaggccacgagtcaggagccagtgtgcgggtcgtcaatcagctgctgaca
gagatggacgggttggagacgcgaaaacaggtcttcatcatggctgcaaccaacaggccg
gacattattgatcctgccgtcctgaggcctgggcgcctggataaaaccctatatgtcggg
ctgccgtgtgccgcagaccgccatgccatcctgatgactgttactaagggtgggaccaga
cctcagctggagcaggacgtccgccttgaggacatcgcctttgatgaacgctgtagttcc
ttttcaggagctgacctgacggcgttggtgagggaagcgtctgtaaacgccttgaaggtc
ttcatgaagtcccagctttctggtcagacccacccctctggctccacagccgatatcaag
gtcaccaaacagaactttgaggacgccttcaagaccattcagccatccgtgtccaaaaag
gaccagctgatgtatgagaggctcagggagtccctcagcagatga
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