Cyprinodon tularosa (White Sands pupfish): 119792707
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Entry
119792707 CDS
T07496
Symbol
valopa
Name
(RefSeq) vertebrate ancient long opsin a
KO
K04256
c-opsin
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ctul01009
]
119792707 (valopa)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ctul04030
]
119792707 (valopa)
Protein phosphatases and associated proteins [BR:
ctul01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119792707 (valopa)
G protein-coupled receptors [BR:
ctul04030
]
Rhodopsin family
Vision
Opsin
119792707 (valopa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srw
7TM_GPCR_Srv
7tm_4
Motif
Other DBs
NCBI-GeneID:
119792707
NCBI-ProteinID:
XP_038155384
LinkDB
All DBs
Position
Unknown
AA seq
387 aa
AA seq
DB search
MDTLSLSVNAVSYTVAAEIPTTDDPFSGPIRNIAPWNFTVLAVVMFVVTSLSLTENLLVM
FVTFKFKQLRQPLNYIIVNLAIADFLVSLTGGLISFLTNARGYFFLGRWACVLEGFAVTF
FGIVALWSLAVLSFERFFVICRPLGNIRLQAKHAILGLLFVWTFSFIWTFPPVLGWNRYT
VSKIGTTCEPDWYSTNITDHSYIITFFTTCFIFPLGVIFFCYGKLLRKLRKVSHGRLATA
RKPERQVTRMVVVMIVAFMVGWTPYAAFSILVTAYPTIELDPRAAAIPAFFSKTAAVYNP
IIYVFMNKKFRKCLIQHFTGMGTIPESNLNQTSERPGITAESQTGELSAIAARIPVGSTM
SPKSDDSQTDCGSFAQLPIPENKVCPL
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggacaccctgagcctgtcagtgaacgcggtgtcctacaccgtggcagcggagatcccc
accaccgacgacccgttcagcggacccatcagaaacatcgcgccgtggaacttcacggtc
ctggctgtcgtcatgttcgtggttacctcgctgtctctgaccgaaaatctcttggtcatg
tttgtcactttcaaattcaagcaacttagacagcccctgaactacatcatagttaatctg
gccatcgcagactttctggtgtccctcaccggagggctgataagtttcctgacaaacgcc
cggggctacttcttcctggggcggtgggcttgtgtcttggaaggctttgccgtcactttc
tttggtattgtggcactgtggtccctggctgtcctgtcctttgagcgcttctttgtgatc
tgccggcccctggggaacattagattgcaagccaagcatgccatcctgggtctgctattc
gtgtggacgttttccttcatctggaccttccctcctgttctgggctggaatagatacact
gtgagcaagatcggaaccacctgcgagcctgactggtactcaaccaacataacagaccac
agctatattatcactttcttcactacctgttttattttcccactcggagtgatattcttc
tgctatggaaagctcctcaggaagctgagaaaggtatctcatggtcgtcttgcaactgcc
agaaagccagagcggcaggtgacccgtatggttgtagtaatgattgtggcattcatggtg
ggttggaccccttacgcagccttctctatactggtcacagcttatcccaccattgaactt
gatccaagggcggctgccatcccggctttcttctccaagacagcggctgtgtacaatcca
atcatctacgtctttatgaacaaaaagttcaggaagtgcctgattcagcactttacaggc
atgggaacaatcccagaaagcaacctgaatcagacctcagagcgacctggaattactgct
gagagtcaaacaggagaattgtctgccattgcagcgcgcatccctgtaggcagcaccatg
tctcccaaatcagatgactctcaaactgattgtggctcatttgctcagcttcccatccca
gagaacaaagtgtgtccactgtaa
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