Cyprinodon tularosa (White Sands pupfish): 119792761
Help
Entry
119792761 CDS
T07496
Symbol
stxbp5b
Name
(RefSeq) LOW QUALITY PROTEIN: syntaxin-binding protein 5
KO
K08518
syntaxin-binding protein 5
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ctul04131
]
119792761 (stxbp5b)
Membrane trafficking [BR:
ctul04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
119792761 (stxbp5b)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
119792761 (stxbp5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LLGL
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
WD40_Prp19
Beta-prop_HPS5
Beta-prop_IFT140_1st
WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Lgl_C
Beta-prop_NUP159_NUP214
EIF3I
Synaptobrevin
Beta-prop_VPS8
Beta-prop_Vps41
WD40_like
DUF4726
Motif
Other DBs
NCBI-GeneID:
119792761
NCBI-ProteinID:
XP_038155452
LinkDB
All DBs
Position
Unknown
AA seq
1158 aa
AA seq
DB search
MLARSVCFLXSVASVKMKKFNIRKVLDGLTAASSSSSTSAQPGTPKENDTVLETLQSEHF
QLCKTVRHGFPYQPSSMAFDPVQKILAVGTQAGALRLFGRAGVECYCQHESGAAVIQLQF
LINEGALVSALADDSIHLWNLRQKIPAILHSLKFNRERITYCHLPFQSKWLYIGTERGNI
HIVNVESFTLSGYVIMWNKAIELSTKTHPGPVVHISDNPMDEGKLLIGFECGVVVLWDLK
SKKADCRYNYDEAIHSVAWHHEGKQFVCSHSDGTLTTWNVRAPAKPAQIITPHGKQPKDG
KKPEPCKPILKVEYKTTRAGDPFMVLSGGLSYDTVGRRACLTVMHGKSTTVLEMDYPIVD
FLTLCETPYPSDFQEPYAVVVLLEKDLVVIDLGQIGYPIFESPYPLSIHESPVTCCEYFA
DCPSELIPALYSVGSRQKRQGYSKKEWPISGGNWGQGTQTYPEIIITGHADGSIKFWDAS
ALMLQVLYKLKTAKVFERARGKEEKPSTDIVEEDPFAIQTLFWCPESRMLCVAGVSAHVI
IYRFSKQEVTTEVVQLLEIRMQCEFSEADSPDPGGDHTPTSAVPPSPQEAEPPNQLSAGI
NSSEGPRDNIPCLQVRSSPLKQSPGYQVELVVQLVWVSGEPPQQITSLAVNSSYGLVVFG
NSNGLAVVDYVQKTLLLSMSISELSSPSDPCQRQPCSPRKPRQPSGGLCDSNDASNNSEE
RCKSPTSGSPSPCNSDDERKQNFIEKVKLKSRRFSKTVANDFAKMSRKISSSGEQKPELD
GKDNAFTRSRSSSVTSIDRESREAISSFYFCESFPRKSDSQVSPCLLVGTTQGSVMMVAL
SMLPGGDQKPQQPVGFASCGPLVRLKGDILTMALLDAAGTLLPPTYEPWYDPNASDEEKE
KVRRRRPATPPTSQEGHDAQFAVLCSEKQAKVVAMPSQTCVYIHNITETSFVLRADVVQM
AGAYCLACFCANGHIMTLSLPSLRPLLDVNYLPLTDMRIARTFCFSNLGQALYLTSPTEI
QRITYSQETCDNLQEMLSELFTPVETPEAPNRGFFKGLFGGGAQSLDREELFGETASGKA
SRSLAQHIPGPGSMEGMKGAASGVVGDLARARVALDERGQKLGELDERTAAMMASADSFS
KHAHDMMVKYKDKKWYQL
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgttagctcgctcggtctgttttcttngtagcgtcgcgtctgtaaaaatgaagaagttt
aacataaggaaggtgctggacggcttgacagcggcgtcctcttcctcctccacctccgct
cagcctggtactcctaaggaaaacgacaccgtcctggagactctccagtcggaacatttt
cagctgtgtaagactgtgcgtcatggctttccatatcaaccatcctccatggcttttgac
cccgtccagaaaatcctggccgttgggactcaggccggagctttaaggctgttcggccgt
gcaggtgtggagtgctactgtcagcatgagagcggtgctgctgtcatccagctccagttc
ctcatcaatgagggggcgctggtgagtgccttagctgatgacagcatccatctgtggaac
ctgaggcaaaaaatcccagcgatccttcattctctgaagtttaacagggagagaatcaca
tactgccacctgcccttccagagcaaatggctgtacatcggcacagagcgaggaaacatc
cacattgtcaacgtggagtccttcaccctctcaggctatgttattatgtggaacaaagcc
attgaattatccaccaagacgcacccagggcctgttgtgcatattagtgataaccccatg
gatgagggcaagcttctgattggatttgagtgtggggtagtggtgctgtgggacttaaaa
tccaagaaagcagactgccgctacaattatgatgaggccatccactcagttgcttggcac
cacgaggggaaacagtttgtctgcagccactctgatggcactctgaccacgtggaatgta
cgagctccggccaagcctgcacagatcatcacgccacatggaaaacagcctaaggatgga
aaaaagccagagccatgcaagcctatcctgaaagtggagtacaaaactaccagagctggg
gacccattcatggtcctgtctggagggctgtcgtacgacacagtggggaggagagcctgt
ttgacggtgatgcacggaaagagcaccaccgtcctggagatggactatcccatcgtagat
ttcctaacactctgtgaaactccatatccaagcgacttccaggaaccgtatgctgtggtg
gttctcctggagaaggatttagttgtaatagatctcggacagattgggtatccaattttt
gagagcccgtatccgctgtccatccacgagtcaccagtgacgtgttgcgagtattttgcc
gactgtccctcggaactgattcctgcactctactctgtcggcagccggcaaaaacgacag
ggctacagcaagaaggaatggcccattagtggtggaaactggggccaaggcacacagact
tacccagagataatcatcacaggacatgctgatggctcaattaaattttgggacgcttct
gcattaatgcttcaagtgttgtacaagctgaagacggccaaggtgtttgagagggccaga
ggtaaagaggagaagcccagcacggacattgtggaagaagacccgtttgccattcagacc
ttgttctggtgtccagagagcaggatgctctgcgtggctggagtctctgctcatgtcatc
atctacaggttcagcaaacaggaagtcaccaccgaggttgttcagctgctcgaaatccgg
atgcaatgcgagtttagcgaggccgactcccccgatccgggaggagaccacacccccacc
tctgcagttccccccagccctcaggaagctgagcctccaaatcagctctctgcaggcatc
aactcttctgaaggacccagagacaatataccatgcctacaggtgcggagctccccgctg
aaacagtctccgggctaccaggtggagctggtggtccagctggtgtgggtgagcggggag
ccgcctcagcagatcaccagcctggcagtcaactcctcctacggccttgtggtgtttgga
aacagtaacggtctggctgtagtggactacgtccagaagacgctgctcctcagcatgagt
atttcggagctgtccagcccatccgacccctgccagaggcagccctgctccccgcgtaaa
ccccgccagccttctggaggactttgcgattctaacgacgcatctaacaactcagaggag
cgatgcaaatcccctacgtcaggatctccctcaccctgcaattcagacgatgaacgaaaa
cagaacttcatagagaaggtgaagttaaaaagcagacgcttttccaagacggttgccaat
gactttgccaagatgtcgcggaaaattagctcatctggtgagcaaaagccagagctggat
ggaaaggataacgccttcactcgctcacgtagctcgagcgtaaccagcatagaccgagaa
tctcgagaggccatctcctccttctacttctgcgagagtttccccaggaagtcggacagt
caggtcagcccctgtctgttagtggggaccacccagggctccgtgatgatggtggccctc
agcatgctgccgggcggcgaccaaaagccacagcagccggttggctttgcctcctgcggc
cccctggtcagactcaaaggagacatcctgactatggccctgctggatgctgctgggact
ctgctgccccctacctatgaaccatggtatgacccaaacgcctcagacgaagagaaagag
aaggtccggaggcgcaggccggccacccctcctacctcacaggagggccacgacgcccaa
ttcgccgtcctgtgttcagagaagcaggccaaggtggtggccatgccctcccaaacctgc
gtctacatacacaacatcacagagacgtcttttgtgctgcgggccgatgtggtgcagatg
gccggcgcttactgcctcgcctgtttctgtgccaatggtcacataatgactctgagtttg
ccaagcctgcgacctctgctagatgtgaactacctgccgctgacagacatgcggattgcc
agaacgttctgcttctctaacttgggtcaagctctgtacctgacctcccccactgagatc
cagaggattacctacagccaggagacctgtgacaaccttcaggaaatgctcagcgagtta
tttacccccgtggagacgccagaggctccaaacagaggctttttcaaaggcctttttggc
ggaggagctcagtctttggacagagaagaactctttggtgaaacggcgtccggtaaggcc
tcgcgcagcctggcccagcacatcccaggcccgggcagcatggagggcatgaagggagcg
gcctccggggtcgtaggggacctcgcccgtgccagagtggcgctggatgagagagggcag
aagctgggggagctggatgagaggacggcagccatgatggccagtgcagactccttctca
aagcacgcccacgacatgatggtgaagtacaaagataaaaagtggtaccagctctga
DBGET
integrated database retrieval system
