Cyprinodon tularosa (White Sands pupfish): 119792827
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Entry
119792827 CDS
T07496
Symbol
impg2a
Name
(RefSeq) interphotoreceptor matrix proteoglycan 2
KO
K19017
interphotoreceptor matrix proteoglycan 2
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ctul00536
]
119792827 (impg2a)
Glycosaminoglycan binding proteins [BR:
ctul00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
119792827 (impg2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SEA
DUF4214
EGF
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
119792827
NCBI-ProteinID:
XP_038155571
LinkDB
All DBs
Position
Unknown
AA seq
1140 aa
AA seq
DB search
MSSLSWRRVFCFALFSLVIILGRLTDAMLEGSSMGYLSQPHFQEPTAFPQIIRVSDVKAS
HDGQKVTFRKKRNIFYQGGLRLCGQDTAEDIVANHLGYFHLRVCQETVWEAFKIFWDRLP
EQGEYQSWMNKCQEGLVTAQDIGSYFSQSEEHQALVKQRMSLGALKSEPTRSWKHMCSTP
SPASSEKVEAAEFDLDQGEQNPAIVSPEVVDTPLFNEIPVKATSAIVLEQVVELSILLTG
EAFCEDLKNPASLKFQMLSRDLAEKIEDALEGLPGFKSVSVIDFRPQKDTQWVDGIVVDY
AVTVEVDGSGVSSEQLNYLTLQSNLVENSYHEIQEPSMVVYTISENKNIFTEGHQLNKLE
SVSEIAEAVSVADGATDIGAVDLSYVLTPDDPSGDQNLPPASENNTLATGDGIIILEESG
LVSPEAVLTTDPPEGGSIEDENLLPEDIVLPPSTVAIQPEELLPEPPFSELPKSITLPEP
PVETEASGSGRENLYDPTIEEDQISLVENKDAKSGAESGRFDHASVGEESVATMFEEEPQ
DKVGISEDLEISTVLTTTDIEKGQPALLPPTETLIIPSEVLEPDVPTTILNPDVEVPVDG
EPQDSNPRDNDPGEVFGVNVVLTSSEEPAFDEKGFDRTIESDGSEVKEGSLSEAMGIDEG
TPLTPEILAGDLVEDEILLVNKDDPKLPATDFPRYTLPTALSPEKNSPFTIVSSIIPDTD
GPTDIAITSSVKTTEEDLGDVTVGDHRYEVIPYDYGLKNQTEEGSTGSPFSVAHGTEQAS
IAMPTSPRRALIVFFSLRVTNMVFSEDLFNKSSPEYKALEQRFLELLVPYLQSNLSHFEN
LEILNFRNGSIVVNSRMKFVKPVARGVTSTVYLILEDFCNTAYQTMNLAIDKYSLDVESG
DQADPCKFQACNEYAECKVNRWSGEAECVCNAGYFSVDGLPCQSICELQADFCLNDGKCD
IIPGQGAICRCRVGENWWYRGEHCEEYVSEPLVVGIAIASVAGFLFVASGVLFFLARTLR
DQYDKEESEDPIRRMESLPSLERATKYNPMYESEATTGYSHYYRRYPEAAMYSSASPEAS
TDFSSEEIRHIYENSELTREEIQDRIRIIELYAKDRQFADFVRQHQAVLDTRRESSSTHT
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctttcctggagacgtgttttctgctttgctctctttagtctggtcataatt
ttgggcagactcacagatgccatgctggaaggctcctctatgggatacctgagtcagcct
cattttcaggagcccacagcgttcccacaaatcatccgggtgtctgatgtgaaggcatct
cacgatggtcaaaaagtcacctttagaaagaaaaggaatattttttatcagggtggactt
cgactgtgtggacaagatactgcagaggatattgttgcaaaccatctgggctacttccac
ctcagagtgtgccaggagactgtgtgggaggcttttaagatcttctgggaccgactgcct
gaacaaggcgagtaccaaagctggatgaacaagtgccaggaagggttggtcactgcccag
gatattggcagctactttagccagtcagaggagcatcaagctctggttaaacagagaatg
tcgcttggagctttgaaaagcgagcccaccagatcctggaagcatatgtgcagcacacca
tcaccagcgagttcagaaaaagttgaagccgctgagtttgatttagatcaaggtgagcag
aatccagccattgtttcaccagaggtggtcgacactccactgttcaatgaaatcccagtt
aaggccacgtctgccattgtgctggagcaggtggtggagctaagcatcctcctaacagga
gaggccttctgcgaagacctcaaaaatcctgccagcctcaagttccagatgctcagcaga
gaccttgcagaaaagatagaagatgctctagaggggcttcctggatttaagagtgtgtct
gtaattgatttcagaccacagaaagacactcagtgggtggatggcatagtggtggattat
gcagtgacagtagaggtggatggatccggagtgagctctgaacaactgaactacctaacc
ctgcagtccaacttggtggagaactcctatcatgaaatccaggagccctccatggttgtc
tacacaatcagtgaaaataaaaacatctttaccgaaggccatcaactcaacaagctggag
agtgtgtctgagattgctgaggctgtcagcgttgcagacggagcgacggatattggtgct
gtagacctatcatatgtcttgacaccggatgacccgtctggagatcaaaacctcccgcca
gcttcagaaaacaacactctggcaacaggggatggcattataattttggaggagagtgga
cttgtgtccccagaggcggtgctcactaccgatccacctgaaggtggtagcattgaagat
gagaatttgttgccagaggatatcgtgctgcctccttctacagtggccatccaaccagaa
gagctcctacctgaacctcccttctctgagctgccaaagagcatcacactgcctgaacca
ccagtggaaactgaggcctctggatcaggcagagaaaatctctacgatccaacaattgaa
gaggaccaaatttcccttgtagagaacaaagatgccaaatcaggagctgaatcagggaga
tttgatcatgcttcagttggagaggaatcagttgccacaatgtttgaagaggagccccag
gacaaggttgggatctcagaggaccttgagatctctaccgttttgacaacaacagatata
gaaaaaggccagcctgctcttctaccacctacagagactctgattataccaagtgaggtt
ttagagcctgatgttcccacaactattctgaaccctgatgttgaggtaccagtggatgga
gaaccacaggactctaaccccagggataacgaccctggggaagttttcggggtcaatgtt
gtattaacctcttctgaggaacctgcatttgacgagaaaggctttgacaggacaatagaa
agtgatggaagtgaagtgaaagagggatctttgtctgaagccatgggtatagacgagggg
acacctttaacgccagagatcttagcaggagatcttgttgaagatgagatattactggtc
aacaaagatgatccaaagttacctgcaacagactttccacgttacaccctcccaactgcc
ctgtccccagagaagaactcccctttcacaatagtctcttccattatcccggatactgat
ggcccaactgacattgcgattacttcatcagtgaagaccaccgaagaggacctgggggat
gtcactgtaggagatcacagatatgaagtgattccttatgattacggtttgaaaaatcag
acagaggagggcagcaccggatccccattcagtgtggcccatggcacagagcaagccagc
attgccatgcctacaagccctagaagagctctgatagtcttcttcagcctgagagtgacc
aacatggttttctctgaagatctttttaacaagagctctccagagtacaaggctttggag
caacgattcctagaactgcttgtgccctaccttcagtccaacctgagtcactttgagaac
ctggagatcctaaacttcagaaacggaagcatcgttgttaacagccggatgaagtttgta
aagcctgtggcccgtggcgtcacctctactgtgtatctcatccttgaggacttctgtaac
acggcttatcagaccatgaatctagcaattgataaatactctctggatgtggagtcaggg
gaccaagcagacccctgcaagtttcaggcgtgcaacgagtatgcagaatgtaaagtgaac
aggtggtcgggtgaagcggagtgtgtttgtaatgcaggctactttagcgttgacggcctg
ccttgtcagagcatctgtgaactgcaggcagacttttgcctcaatgacggcaagtgtgac
atcatccctggccagggagccatctgcagatgtcgtgttggagagaactggtggtataga
ggagaacactgcgaggaatacgtgtctgagccactggtagttggcatagccatagcctct
gttgctggttttctgtttgtggcatctggggtgctgttcttcctggccagaactctacgg
gatcaatatgacaaggaggagtcagaggatcccatacggcgtatggaaagtcttccatcc
ctggagcgggcgaccaaatacaaccccatgtatgaaagtgaagccacaacaggctacagc
cactactaccggcgttatcctgaagccgctatgtacagtagtgccagccctgaagcatca
actgactttagcagcgaggagattcgccatatttatgagaacagtgagctgaccagggag
gaaatccaagacaggatacgaataattgaactctacgctaaggaccggcagtttgcagac
tttgtgcggcagcatcaagcggtcctggatactcgcagagaaagctcctccacccacaca
tga
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