Cyprinodon tularosa (White Sands pupfish): 119792836
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Entry
119792836 CDS
T07496
Symbol
col8a1a
Name
(RefSeq) collagen, type VIII, alpha 1a isoform X1
KO
K23455
collagen type VIII alpha
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
119792836
NCBI-ProteinID:
XP_038155586
LinkDB
All DBs
Position
Unknown
AA seq
750 aa
AA seq
DB search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NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagtagtgctttagccatgcctcgccttcttggccccctccttactgttctactt
cagctttttgtcttcccatgtgtgactgatggggcttactacggacacaagcaacaccct
cagccataccagccaatgcagcaccttcaacacataaacatgggaaatagaggttttcct
caacaacagtacattggcaaggaagtgccctacatgcaatatccacactataggaaggag
ctgccccagatgccattgcttaagggcaaagaaaatccccgtaaaggggggaactacaat
ggtggtaaagaaaaaggtttaacaatacctagtgctgtggaaggagttcctcagggagaa
caaggcccagctggaccacctggacctgtgggacctccaggacctcctggacctccaggg
aatggattacctggcccagagggccaacctggacctccaggtccaccaggattacctgga
atgggaaaactaggcttgcccggactgccaggaaaaccaggtgtaaacggtgagcgtggg
cctcaagggaaaataggaccaagaggggaagagggtcctgatggtccaccaggtccacag
ggaccccaaggaccacctgggtttcctggaataggtaaaccagggttacagggattaccg
ggacaaccaggtgtcaaaggggaaccgggtcacaaaggcctgccaggtctgccgggatta
ccaggaccaaaaggagacaaagggatgggtctgcctggacagcctggtcacaaaggactt
cctgggcctcctggacctgctggcccaagagggctgccaggtcttggaaaaccagggtta
aatggtttacctggtccacaaggacccccaggacataaaggatatcctggagaagcaggc
cctcccggaccagctggggaaggagggaagcctggcccaccaggtccacctggtcaagga
aagccaggtcaaaatggtctgcctggacagccaggaaggacaggtgagaagggccttcca
ggaccaccaggtctgccaggaaagccaggtcttccaggatttggcaagcaaggacttcca
ggaccaaaaggtgataaaggaattggtgcacccgcaggacccccaggacccaaaggagaa
aagggtattggtggaatacctggaatgcttggactccctggaccgaatggtcctccaggt
cctgcaggaccaattggagaacctggaagtataggtgcacctggtcctaaaggagatagt
ggagatgaaggaccaagagggcgtgatggggctaagggtgaccttggtcctcaaggacca
cctggtaaggatggtctacctggggaacttggagaaccaggcccaagaggtccacctgga
tcaagtggtccaaaaggtgcggatggccagaaaggtctagctggtatgcctggtccccct
ggaactcctggtttgagaggacatgccggattacctggggaaagaggtattcagggacct
caaggaatccctggaataaatggtgcagttggacccattgggcctactggtcccacagga
cccaaaggagaaagtggtcctcctggtccaccaggcattgcagacattgggagtcctggc
ctgcctggtcctgtaggagccccaggaagagagggaccgtctggaccccctggacaacca
ggtcaacctggtccacctggaccaccaggaccacccggtgaacccgttttttcaccagaa
atggctggagtactttctgagatgggtccgggactagatggtgttaaagctggaagttat
gataagaagggcaaatatggtggaggctgggctgaagtaatgggttccagtggccttgaa
atgccagcatttactgctgtagcatctacaccctttccacctgtgggcagcccagttgtt
tttgataaacttttgtacaatggccgccaaaactacaatccccagacaggaattttcacc
tgtgacattcctggcatttattactttgcctaccacattcactgtaagggagaaaatgtg
tgggtggctttgatgagaaacagtgagcctgtgatgtatacctatgatgaatataaaaag
ggtttcttagatcaagcatcgggaagtgcagtactacctcttcaacctggggacactgtg
tacattcagatgccatcagatcaggcctctggactttatgctggagagtatgtgcagtcc
tccttctctgggtatttgctctatccaatgtaa
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