Cyprinodon tularosa (White Sands pupfish): 119792860
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Entry
119792860 CDS
T07496
Symbol
usp42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ctul01002
]
119792860 (usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ctul04121
]
119792860 (usp42)
Enzymes [BR:
ctul01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119792860 (usp42)
Peptidases and inhibitors [BR:
ctul01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
119792860 (usp42)
Ubiquitin system [BR:
ctul04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
119792860 (usp42)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
119792860
NCBI-ProteinID:
XP_038155614
LinkDB
All DBs
Position
Unknown
AA seq
1180 aa
AA seq
DB search
MTIVDRLSEKSDHESVGFNRSFTSGEVGMDGSCSSSWAVGPSMAGDSPRLKSPGGCLGPM
PGAAVYNGTHPTVDCPKDQVMSSEDGIDSPQKVLFPPERLSLKWTQVHRIGAGLQNMGNT
CFLNSALQCLTYTPPLTNFMLSREHSKTCHEPGFCMMCTMQNHIIQVFANSGNVIKPIGV
LNELKRIAKHFRYGSQEDAHEFLRYTVDAMQKSCLPGTKLDRQTQATTFIHQVFGGYLRS
RVKCLNCKSVSDTFDPFLDVTLEIKTAPSVSKALEQFVKPEQLDGENAYKCTKCKKMVTA
SKRFTIHRSPNVLTLSLKRFANFTGGKITKDVKYPEYLDLRPFMSQSQGEPQIYGLYAVL
VHSGFSCHAGHYFCYIKASNGQWYHMNDSSVSMSDVRSVLNQQAYVLFYIKSCDAKKSGD
YSNLSHNPGIPGQSSPRPVVTQRIHTAIPHSNTGFIGPQLPPHMTKTPLHVNGNGSLRDY
PSNSKASSSAVGKPNHGGASSSASHSISRPTSIPDQEKRQKLSFFIGQGKQNRPSSSSSY
SHPSSASGSSSSSLSASQSTSDVRFVPRQLNHVNGTSCSNGDQPAGGSGSSFLVPYSQES
SEESDQESCSTQDMGCTSKLQAKGSNATGEVFAPSSKNINGEINLHHNSSELNGSASELT
KKNQNGQFNGHHRVNGQTPDKVSTHNHTSSSVNAVANGLGSDHKEANRDSASSQAASENI
HPAAKESQPLPAADERVKVLPEPLPHQTPSSAVSASPSATLSKTQSVASRDSASSGCPVN
FSNVSSEPARCERGNGVSAAAENFSKNEDVKDSPQNNGPSARTETNMEEKGQCQSKSGSR
GIERQTSHDRERLYSEHSRDREKHYRDRSLPRESHSDRLRYRRDYRDHHRSYRDRYPPPE
CSYRDWDYDRRKDRAGWPSWEPDRERRSYHYSHYHHRFDLSHERRGHPRLQEPHGRCRWQ
QDGRESWPMKDKRNGWDRDSYYSKERSPSPGGTGLESNKSKVSPHRNHLSNASSTHKRDD
QSDKKTAAYLRKDREDSSEVHRSKKHKKSKKKKKSKDKDRHHESSSDLDSDRAAETRKRK
KKKRRHRDSDSDSGRGHTNRSSKDGENRKRHHSDMKDSRYEKDFLPEKRHRSDLAVGGRD
HPSPSHHNPSSNHSVHQHLNGYTGNGRTNGDFNGFSSGLK
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacagattgtcagaaaaatctgaccacgagtcagttggatttaaccga
tccttcaccagtggagaagtggggatggacggcagttgttccagtagttgggcggtgggt
cccagcatggccggtgactctccgaggctcaagtctccaggaggctgcctgggtccgatg
ccaggggctgccgtctataacggcactcaccccactgtggactgtcccaaggaccaagta
atgagcagtgaggatggcattgactcaccccagaaggtcctgtttcctccggagcggctc
agcttaaagtggacacaggttcaccgcatcggtgctggcctgcagaacatggggaacaca
tgcttcctcaactcagccctgcaatgcctcacttacactccgccgttaaccaacttcatg
ctgtcaagggagcactccaaaacctgtcatgagcctgggttctgtatgatgtgcacaatg
caaaaccatatcattcaggtttttgccaactctgggaatgtcattaagcccatcggtgtc
ctcaatgagcttaaacgaatagcaaagcacttccgctatggaagccaggaggatgcacat
gagttcctgcggtacacggtggacgctatgcaaaagtcctgcttacctggaactaaattg
gaccggcaaacgcaggccaccactttcatccatcaagtatttggagggtacctcaggtcc
agagtaaaatgtctgaactgcaaatcagtttctgatacattcgatccttttctggatgtc
actttggagattaagacggcaccgagtgtctccaaagctctggagcagtttgtcaaacca
gaacagctagatggtgaaaatgcctacaagtgcacaaagtgcaaaaaaatggttacagcc
tcgaagagattcacaatccaccgcagccccaatgtgctcaccctttcactaaaacgattc
gcaaacttcactggaggaaaaatcacaaaggatgttaaatatccggaatacctggacctg
cggcccttcatgtctcagtcccaaggagagcctcagatctacggcctgtacgctgtgctg
gtccactctggcttcagctgccatgctggacattacttctgctacattaaggctagcaat
ggtcagtggtaccacatgaacgactcctctgtgtctatgagtgacgtccgctctgtcctc
aaccaacaggcctatgtgcttttctacattaaatcatgtgatgcgaagaagtctggggac
tacagcaatctgagccataacccaggtatccctggtcagtcgtctccccggccggtggta
acgcagcgcatccacaccgccatcccccacagcaacacaggcttcataggtccccagctc
ccaccacacatgaccaagactcctctccatgttaatgggaatggatctctgagggactat
cccagcaactctaaggccagcagcagtgcagttggaaaacctaaccacggaggagcttct
tcctcagcctcccactcaatcagccgacccacgtcgattccagaccaagagaagcgtcag
aaactttcgttctttatcggacaaggcaaacagaaccgcccatcttcctcctcctcctac
agccacccatcctcagcaagcggctcctcctccagctctttatctgcctctcagtctacc
tcagacgttcgctttgttccacgtcagctaaaccatgttaacggcacgtcttgcagtaac
ggggatcaacctgccggtggaagtgggtcctctttcttggtgccgtacagtcaggagtct
tcggaagagtcggaccaggagagctgtagcactcaggatatgggctgcacgtccaagctt
caggctaagggcagtaatgccacaggagaagtcttcgccccctcttctaaaaacattaac
ggtgaaataaatctgcatcataacagtagtgaattgaatggatcagcctctgaattaact
aaaaaaaaccaaaatggacaatttaatggacaccacagagtaaatggacaaacccctgat
aaggtatccacccataatcacaccagttcctctgtgaatgctgttgccaatggacttggc
agtgaccataaggaagcaaacagagactccgcctcatcccaggctgcttcagagaacatt
catcctgccgctaaagaaagccaacctctccctgctgctgatgaaagggttaaagtgctg
cccgaaccccttcctcaccaaacaccatcctctgctgtcagcgcttcaccttcagccact
ttatccaagacccagtctgttgcatctagagactcggctagttctgggtgtcccgtgaac
ttctcaaacgtatcctcagaaccagcccgctgtgaaaggggtaacggggtttcagcagct
gctgagaattttagcaagaatgaggacgttaaggattccccacagaacaatggtccatca
gccaggactgaaactaacatggaggaaaagggacagtgccagtccaagtcaggttctaga
ggcattgaaagacagacctcccatgacagggagagactttactctgagcacagcagagac
agagagaaacactacagggacagaagtctgccacgggaaagtcacagcgaccgccttcgc
tacagacgagattaccgagatcaccatcgctcatatagggaccggtatcctcctcctgaa
tgcagctacagggactgggactacgaccggcgcaaggaccgagctggctggccctcctgg
gagcctgatcgtgagcgacgctcttaccattacagccattaccatcacaggtttgatttg
agccacgagaggagaggacacccccgtcttcaagagcctcacggtcgctgcaggtggcaa
caggacggtcgggagtcctggccaatgaaggacaaaaggaatgggtgggacagggacagt
tactattcaaaggaaaggagtccctctcctggtggtaccggcctagaatcaaacaagtcc
aaggtctccccccatcggaatcatctctctaatgcttcttcaactcataagagggatgat
caaagtgataagaagacagctgcttatctgagaaaggacagagaggacagctcagaggta
catcgctcgaaaaagcataaaaagagcaagaagaagaagaagtcgaaggataaagaccgg
caccacgaaagcagctctgatctggattcagacagagcagctgaaaccaggaagaggaag
aagaagaagagacggcacagggacagtgattcagattcagggcgaggccacaccaacagg
agcagcaaagacggggagaatcgaaaacggcatcactctgacatgaaggactcgaggtac
gaaaaagactttttaccggaaaaacgtcaccgcagcgacttagcagtgggaggcagggac
cacccatcaccatctcaccataatccctcctcaaaccattcagtgcaccaacatcttaac
ggatacacaggaaatggtcgaaccaatggtgacttcaatggattttcaagtggcctcaag
tag
DBGET
integrated database retrieval system
