Cyprinodon tularosa (White Sands pupfish): 119792866
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Entry
119792866 CDS
T07496
Symbol
shmt2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul00260
Glycine, serine and threonine metabolism
ctul00630
Glyoxylate and dicarboxylate metabolism
ctul00670
One carbon pool by folate
ctul01100
Metabolic pathways
ctul01200
Carbon metabolism
ctul01230
Biosynthesis of amino acids
ctul01240
Biosynthesis of cofactors
ctul04981
Folate transport and metabolism
Module
ctul_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
119792866 (shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
119792866 (shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
119792866 (shmt2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
119792866 (shmt2)
Enzymes [BR:
ctul01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
119792866 (shmt2)
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Ortholog
Paralog
GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
119792866
NCBI-ProteinID:
XP_038155664
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All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
MLSYAFKQLTRPLCQRASTRLSVRFQQSHAATRTAVEDGSWTGQESLAEDDPEMWALLQR
EKDRQCRGLELIASENFCSRAALEAQGSCLNNKYSEGYPGRRYYGGAEVVDQIELLCQKR
ALETFDLDPEKWGVNVQPYSGSPANFAVYTAVLKPHDRIMGLDLPDGGHLTHGYMSDVKR
ISATSIYFESMPYKLNPASGLIDYEQMEMTAKLFRPRLIIAGTSAYARLIDYARIKKVCT
DINAYMLADMAHISGLVAGKGVPSPFDHADLVTSTTHKSLRGSRAGLIFYRKGIRSVDKK
GREIMYDLEDKVNFAVFPSLQGGPHNHAIAGVAVALKQAQSPMFREYITQVLKNAKAMAG
ALLSKGYTLVSGGTDNHLVLVDLRPKGIDGARAERVLELVSITANKNTCPGDKSALTPGG
LRLGAPALTSRQFKEDDFVQVVEFMDEGFKIALDVKKKTAKLQDFKNFLLQDPETVARIA
DLRHRVEAFARPFPMPGFCDH
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgctctcctacgctttcaagcagctcacacggcccttgtgccagcgggcctccactcgc
ctcagtgtacgattccagcagtcccatgcagccacccgtaccgccgtcgaagatggctcc
tggaccggacaagagagtctggctgaggacgacccagaaatgtgggctctgctgcagagg
gagaaggacagacagtgtcgtggtttggagctcattgcatcagagaatttctgcagccga
gcagctctggaggctcagggctcatgtctgaacaacaaatattctgaaggctacccaggg
agaaggtactatggtggagcagaggtggttgaccaaatcgagcttctgtgtcagaagcga
gctttggagacctttgacttggacccggaaaagtggggcgttaacgtccagccgtactca
ggatctcctgctaactttgctgtctatacggctgttcttaaaccccatgaccgcatcatg
ggcttggacctgcccgatggaggacatcttacgcacggctacatgtcagatgtgaagagg
atctctgcaacctcaatatactttgagtccatgccttacaagttaaatcctgcttcggga
ctcatagactacgagcagatggagatgacagccaagctgttccggcccaggctcatcatc
gctggcaccagcgcctacgctcgcctcattgactatgcccgcatcaagaaggtatgtaca
gacattaacgcctacatgctcgctgacatggctcatatcagtggcctggtggcgggaaag
ggagtcccctctccctttgatcacgctgacctggtcacttctaccacacacaagtccctc
agaggatccagagctggccttatcttctatcgtaagggcatccgctcagtggacaagaaa
ggaagggagatcatgtacgacctggaagataaagtaaactttgcagtgttcccgtccctg
cagggtggacctcacaaccacgctattgctggagtagcagtggctctcaaacaggctcag
tctcctatgtttagggagtatattacccaagtactgaagaatgcaaaggccatggctgga
gctcttctcagcaaaggctacacactggtatcaggaggaacagacaaccacctggttctg
gtggacttgcgcccaaagggcatcgatggagctcgcgctgaaagagtactggagcttgtt
tcgatcacagccaataagaacacatgcccaggagacaagagtgccctgacccccggaggc
ctaaggctaggagctccagctctgacttccagacagtttaaagaagacgactttgtgcag
gttgtggagtttatggatgagggattcaagatcgctttggatgtcaagaaaaagacagca
aagctccaggacttcaagaacttcctcctccaggacccggagacggtggctcgtattgcg
gatctgcggcaccgggtggaggcatttgccaggccgttccccatgcctggcttctgcgac
cattag
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