Cyprinodon tularosa (White Sands pupfish): 119792957
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Entry
119792957 CDS
T07496
Symbol
irx1b
Name
(RefSeq) iroquois-class homeodomain protein IRX-1b isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctul03000
]
119792957 (irx1b)
Transcription factors [BR:
ctul03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
119792957 (irx1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
119792957
NCBI-ProteinID:
XP_038155750
LinkDB
All DBs
Position
Unknown
AA seq
438 aa
AA seq
DB search
MSFPQLGFPQFLSASHEVYGGERPASATRDGGAEGGISASATAAAVGSMLGMYGSPWAAP
NYSAFLPYSGAADLALISQMGSQYELKDSPGSHPAASLPVHPAQGFYPYGQYPYGDPSRA
KTATRETTSTLKAWLQEHQKNPYPTKGEKIMLAIITRMTLTQVSTWFANARRRLKKENKV
TWGRSAEDRDGRIFSSDNEDEHGKNGSDDEEEEEEIDLETVDIERPEEQRSGEPGSGKGE
ADAGLPVREQASTESSRTLEPGDKLAAARSPSIHDCQRAPQSKPKIWSLAETATAPDSAH
KTTPPAAFAQQAALASAGHPALLPGHGIYTCQIGKLHNWANAALMNANSILNMRSLLGGA
PPGHLPLHGAVPAPAAAAGAATSGSEEDSDLESSGSFSPKRDDEERDRRPDSLKSPFQLI
TDRPHHGRTPQRVLTTTL
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccctcagctggggttcccccagttcctcagtgcctctcatgaggtgtacgga
ggcgagcggccggcctcggctacccgggatggaggcgcggagggcgggataagcgcctcc
gctacggccgcggctgtcggttctatgctggggatgtacggaagcccgtgggctgctccg
aactacagtgcctttctgccgtacagcggagccgcggacctcgccctcatatcccagatg
ggctcccagtatgagctgaaggacagcccgggctcccatcctgcggcctccctgcccgtc
cacccagctcagggcttctatccgtatggccagtacccatatggggacccctcaagggcc
aaaacggctaccagggagaccaccagcaccctgaaggcctggctgcaggaacaccagaag
aacccctaccccaccaagggggagaagatcatgctggcgatcattacaaggatgacgctc
acacaggtctccacgtggttcgcaaacgcccgcaggcgccttaagaaggagaacaaggtg
acctggggccgcagcgcagaggaccgggacggccgcatcttcagcagcgacaacgaggat
gagcacggcaagaatggcagcgatgacgaagaggaggaggaagagatcgacttggaaacg
gtcgacatcgagaggccggaggagcagagatccggggagccgggctctgggaagggagag
gcggatgcgggcctccccgtcagggagcaggcctccacggagagcagcaggacgctggag
cctggagataaacttgctgcggcgcgttcaccgagcatacacgactgccagagagcaccg
cagagcaaacccaaaatctggtctctggcggagacagccacggccccagacagcgcgcac
aaaaccactcctccggcggcctttgcgcaacaggcggcgttggcctccgccggccacccg
gccttgctgccgggtcacggaatatacacgtgccagatcggcaagctgcacaactgggcg
aacgcggctctaatgaacgccaactctattttgaacatgaggtctctgctgggcggcgcg
ccgcccggacacctgccgctgcacggagcggtgcctgcgcccgcggcggccgcaggcgca
gcgacgtccggctcagaggaggacagcgacttggagtcatcgggaagcttcagtccaaaa
agagatgatgaggaaagagatcgcagacctgattccctcaagtccccctttcagctcatc
actgacagacctcaccatggaaggacgccgcagcgagttctgacaacaacattatga
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