Cyprinodon tularosa (White Sands pupfish): 119793009
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Entry
119793009 CDS
T07496
Symbol
si:dkey-30c15.12
Name
(RefSeq) B-cadherin isoform X1
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04371
Apelin signaling pathway
ctul04514
Cell adhesion molecules
ctul04520
Adherens junction
ctul05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
119793009 (si:dkey-30c15.12)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
119793009 (si:dkey-30c15.12)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
119793009 (si:dkey-30c15.12)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
119793009 (si:dkey-30c15.12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ctul03036
]
119793009 (si:dkey-30c15.12)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ctul04515
]
119793009 (si:dkey-30c15.12)
04090 CD molecules [BR:
ctul04090
]
119793009 (si:dkey-30c15.12)
Chromosome and associated proteins [BR:
ctul03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
119793009 (si:dkey-30c15.12)
Cell adhesion molecules [BR:
ctul04515
]
Cadherins
Major cadherins
119793009 (si:dkey-30c15.12)
CD molecules [BR:
ctul04090
]
Proteins
119793009 (si:dkey-30c15.12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Motif
Other DBs
NCBI-GeneID:
119793009
NCBI-ProteinID:
XP_038155856
LinkDB
All DBs
Position
Unknown
AA seq
831 aa
AA seq
DB search
MQFDSTVTAQQPGEEMKDLTKRRIFRGILTLCVLQSLDSLVTAKTLLGSLGKIHNHTNPG
IPDGSYLEEDAVPFLQLPWRPPIAGGLNRMKREWVIPHINFAENDRGPYPKYMVEIKSSK
ARKVAINYKITGPGADEPPEGIFTIDERSGAMYVTQALDREKKARYKLWAHALLEKENAE
QPMELIINVIDQNDNSPEFNTSVLTGRVSESADVDEPVLKVTAEDKDDPTTKNAIIRYRI
KSQTPAMPKEEMFAINAVSGVVRLKERGLDRETHPEYKLIIQAADMEGEGRTATCTAVII
ITDSNDNAPKFTESSMTTSVYENTVGVEVARLKVTDMDEAGSPNSNTKYSIIKGNEGGAF
NITVGPNKMEGIITTAKELDFEGLSVYKLLVVVTNEAPFSLPVPTATATVTVNVIDRNEA
PVFGPAEVQVTLSEDMKTDTSVVELKAKDPDTARKQQVRYKLLNDTARWLSNNSSTGLVQ
IARSMDRESRYVTDNKYTVLILAYDDDIIPATGTGTLVVSLLDVNDHFPVIKQRKAILCN
TDPLPALLDIVDLDGPGHAGPFTVELIAGHKTNWTVKINHTSHVVSLYPKRDLPPGDYNV
LMRVYDVEIHFQDSRVAVEVCHCQGVVDACFMPLDDRRSSIPSFATPLLGTVFGVLLLLL
ILLLLLRKRRDGGKKEPLLELERDDIFCYSEEGGGEDDKEYDLSQLQRGLDHRPEVFSTD
VFPTIQTRPQYRLQIQANEEIGKFIEYNLQAANGDPTAPPYDSLLVFDYEGGGSEADSLS
SIHSSDSDEEQDFQSLAQWGPRFSRLTDLYTGGIEEEDDDDQTLPGKTEWV
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttgattctacagtaacagcacaacagcctggtgaagaaatgaaagacttaact
aaaagaaggatttttagagggatccttacactctgtgtacttcagagtttggattctcta
gtgactgcaaagacactactggggtccttgggcaagattcacaatcatactaatccaggg
attccagatgggagctaccttgaggaggatgctgtcccctttctccagctgccctggcgt
ccaccgattgcaggcggtctgaaccggatgaagagggagtgggttattcctcacatcaac
tttgcagaaaacgaccggggtccataccccaaatatatggtggagatcaagtccagcaaa
gccagaaaagtagccataaattataagatcaccggcccgggagcagatgagccccctgag
ggtatctttaccattgatgaacggtctggtgcgatgtatgtgacccaggcactcgacagg
gagaaaaaagccagatacaaactctgggctcatgccttgttagagaaagagaatgcagag
cagcccatggagctcatcatcaatgttattgaccaaaatgacaactccccagaattcaac
acaagcgtcctcactggcagagtgagcgaaagtgcagacgttgatgaacctgtcttaaag
gtaacagcagaagataaggatgatccaacaacaaaaaatgccataattagatatcgaata
aaatctcaaacgcctgcaatgcccaaagaggaaatgtttgccataaatgcagtgagtgga
gtggtccgtctgaaggagcgaggactagacagagagactcacccagaatacaagctgatc
atacaagctgcagatatggagggggaagggcggactgcaacctgcactgctgtcattatc
atcactgacagcaacgataatgctccaaaatttaccgaatcatctatgaccacatcagtc
tatgaaaacacagtaggagtggaggtagcaaggctgaaggtcactgacatggatgaggca
ggatctccaaattccaacaccaaatactccatcatcaaaggcaatgaaggtggagccttt
aacatcactgttggcccaaataagatggagggaataatcactactgccaaggagctggat
tttgagggactatctgtttacaagctgttggtggtggtgacaaatgaggcaccattttct
ctccctgtccccactgcaacagccaccgtcacagtgaatgtcattgacaggaacgaggct
cctgttttcggcccagctgaggtgcaggtaacactctcggaggacatgaaaactgacact
tctgtggtcgaactcaaagctaaggacccagatacggccagaaaacagcaagtaagatac
aaactcttaaatgacactgccaggtggctgagcaacaactccagcactggattggtccaa
attgcaagaagcatggacagagagtcgcgatacgtcacagacaacaaatatacagtttta
attttagcatatgatgatgatataattccagctacaggaactggtactctggtggtgagc
ttgttggatgtgaatgaccatttccctgtcatcaagcagaggaaagcaattctgtgcaac
actgaccctttgcctgcactcctggatatagtggacctggatggaccgggtcatgctgga
ccgtttaccgtggagcttatagcagggcataaaacgaactggactgttaaaatcaatcac
acaagccatgttgtatctctttaccccaaacgagacctacctcctggagactataacgtt
ctcatgagggtttatgatgttgaaatacacttccaagacagtagggtggccgtagaggtg
tgccactgtcaaggagtggtggatgcctgcttcatgccactcgatgacagacgttcaagc
attccctcttttgcaactcctcttctagggactgtttttggtgttctattgctgctcctg
atacttctgttgctgttgagaaaaaggagggatggaggaaagaaggagcctcttcttgag
ttggaacgtgatgacatcttctgctacagcgaggagggaggaggtgaagacgacaaggag
tatgatctgtcccagttgcagagaggcctggaccatcgacctgaggtcttcagtacggat
gtttttcctactatccagactcgaccgcaatatcgtttacagatccaagccaatgaggaa
atcggaaaatttattgaatacaacctgcaagctgccaacggtgatcccacagctcctccc
tatgactctctccttgtgtttgactatgagggtggaggctctgaggcggattctctcagc
tccattcactcctcagactcagatgaggagcaggacttccagagcttggctcagtggggg
ccacgcttcagcagactgacagacctgtacactgggggcatagaggaggaagatgatgat
gaccaaacactgccaggaaaaacagaatgggtttga
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integrated database retrieval system
