Cyprinodon tularosa (White Sands pupfish): 119793294
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Entry
119793294 CDS
T07496
Symbol
trim71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71 isoform X1
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctul03019
]
119793294 (trim71)
04121 Ubiquitin system [BR:
ctul04121
]
119793294 (trim71)
Enzymes [BR:
ctul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119793294 (trim71)
Messenger RNA biogenesis [BR:
ctul03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119793294 (trim71)
Ubiquitin system [BR:
ctul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119793294 (trim71)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF4934
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
zf-B_box_Trim66
zf-RING_5
zf-C3HC4
Ig_GEX2_N
Beta-prop_IFT122_1st
Invasin_D3
CRLF3_N
Motif
Other DBs
NCBI-GeneID:
119793294
NCBI-ProteinID:
XP_038156322
LinkDB
All DBs
Position
Unknown
AA seq
837 aa
AA seq
DB search
MFLLQMASFPDSDLQTCPVCKELCGSSAPISSSSSTSSSSSHTSNSSNHPTKRLHVLPCL
HAFCRQCLEGQRSPGDPLKLRCPTCDQKVSISEAGVDSLPSSNFLFSNLLDVVVSSEENI
QNKNGHHHLGGLLGGSSGFHPSHGGLLHTQNMGEPQCSSCDEENPATSHCLDCQEYLCDN
CVRAHQRVRLTKDHFIERLGESLHLSRVNSNNSSSGPPGVSVSLAQSLQNNFALLSLFQD
RMSYCQHHDNEVFLFFCETCSVPICRECSVGRHMGHTFVYLQDAVQDCRAITIQLLADAQ
QGRQAVQLSMEKVQAMAEQVEIKAKVVQTEVKALVLRHKKALEERECELLWKVEKIRQVK
AKSLYLQVEKLHQSLTKLDSTIAAVSQILDEGHHLDVLLARERMLTQIHELKTLRSLLQP
QEDDRFMFTPPDQQALYIAIQSMGLISSGAFAPVTKAHGEGLKNVLRGKPASFTVIGYDH
DGEPRLSGGDPVSAMVMSTADGSLSAMEVTDHQNGSYTVSYLPKIEGEHLVSVLVCNQHI
QGSPFKVTVKSGRSYGSLGSQVSSFGCEGEGDGQLCRPWGVSVDKEGYVVVADRSNNRIQ
IFKPCGAFHHKFGSLGSRPGQFDRPAGVACDSQRRIIVADKDNHRVQVFTFEGQFLLKFG
EKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRVQLFAPDGSFLNKYGFEGALWKHFDSPR
GVAFNHEDHLVVTDFNNHRLLVIRPDCQSARFLGSEGTGNGQFLRPQGVAVDQENRIIVA
DSRNHRIQVFEPNGNFLCKFGTQGSGYGQMDRPSGVAVMPDGVIVVVDFGNNRILKF
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgctacagatggcttcgttcccagattccgacctgcagacctgtccggtctgt
aaggagctgtgtggctcctctgctcccatctcctccagctcctctacctcatcgtcctcc
tctcacacctcaaactcctccaaccaccccaccaaaaggctccacgtcctgccttgcctg
catgccttctgcaggcagtgcctggaggggcagcgcagccccggtgaccccctgaagctg
cgatgccccacctgcgaccagaaggtctccatatccgaggccggggtggactccctgcct
tcctccaacttcctcttcagcaacctgttggacgtggtggtgagctctgaagagaacatc
cagaacaagaacggccaccatcaccttggggggttgcttgggggctcctctggcttccac
ccttcacatgggggcctgctgcacacacagaacatgggggagcctcagtgtagctcctgc
gatgaggagaacccagccacgtcccattgcctggactgccaggagtacctctgcgacaac
tgcgtccgagcgcaccagcgggtgcggctgaccaaagaccacttcatcgagcgcctgggc
gagagcctccacctgagccgggtcaactccaacaatagcagctctggcccaccgggggtg
tccgtgtccctcgcccagtccctgcagaacaactttgccctgctgtccctgttccaggac
aggatgagctactgccagcaccatgacaatgaggtgttcctgttcttctgtgaaacctgt
tcagtgcccatctgcagggagtgcagcgtgggccgccacatgggccacacttttgtctac
ctccaagatgccgtgcaggactgcagggccatcaccatccagctgctggccgacgctcag
caggggcgacaggccgtccagctaagtatggaaaaagtgcaagccatggcagagcaggtg
gagatcaaggccaaggtggtgcagactgaagtgaaggctctcgtcctgaggcacaagaaa
gcgctggaagagagagagtgtgagcttctgtggaaggtggagaagatccgtcaggtgaag
gccaagtctctgtacctgcaggtggagaagctccaccaaagtctgaccaaactggacagt
accatcgccgctgtgagccagatactggatgagggccaccacctggacgtgctgttggcc
agggagcggatgctcacccagatccatgaactcaagactctcaggagtctgctgcagccg
caagaggatgaccgcttcatgttcactcctccagaccagcaggctctgtacatcgccatc
cagtccatggggctgatcagcagcggcgcctttgcccctgtaaccaaagcccacggcgaa
ggtttgaaaaacgtactgcgagggaagccagcgtcctttactgttatcgggtacgatcac
gacggagagccgcgcttgtccggcggggatcctgtctcagcaatggtgatgtcgactgcg
gacggctctctgtcggcgatggaagtgacggaccaccagaacggctcctacacggtcagt
taccttcccaaaatagagggagagcacctggtgtcggtgttggtgtgcaaccagcacatc
cagggcagccccttcaaggtgacggtgaagtcaggacggagctacgggtccctgggatcc
caggtgtcgtccttcggatgcgagggggagggcgacggccagctgtgccgtccctggggc
gtcagcgtggataaggaaggatacgtggtggtggcggaccgcagcaacaaccgcatacag
atattcaagccgtgcggtgccttccaccataagttcggctctttgggctccaggccgggt
cagttcgatcgcccggccggggttgcctgtgacagtcagagacggatcatcgtggccgac
aaagacaatcaccgtgtgcaggtgtttacgtttgagggccagttcctgctgaagtttgga
gaaaaaggcaccaagaacgggcagttcaattatccctgggatgtggctgtcaactccgag
ggtaaaatcttggtgtcggacaccaggaaccaccgcgtgcagctcttcgcccccgacggc
tccttcctcaacaagtacggcttcgagggggccctgtggaaacactttgattctcccaga
ggagtagccttcaaccacgaagaccacctcgtcgtgaccgactttaacaaccaccgcctc
ctggtcatccggccggactgccagtctgcgcgcttcctgggctcagagggcacggggaac
ggccagttcctgcgtccccagggcgtcgccgtggaccaagagaaccgcatcatcgtggcc
gactcccgcaaccacagaatccaagtgttcgagcccaacggaaacttcttatgcaaattc
ggcactcaggggagcggctacggacagatggaccgcccatccggggtggcggtgatgccc
gacggagtcattgtggttgtagactttggaaataaccgcattctcaaattctaa
DBGET
integrated database retrieval system
