Cyprinodon tularosa (White Sands pupfish): 119793336
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Entry
119793336 CDS
T07496
Symbol
acin1a
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03013
Nucleocytoplasmic transport
ctul03015
mRNA surveillance pathway
ctul03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119793336 (acin1a)
09122 Translation
03013 Nucleocytoplasmic transport
119793336 (acin1a)
03015 mRNA surveillance pathway
119793336 (acin1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctul03019
]
119793336 (acin1a)
03041 Spliceosome [BR:
ctul03041
]
119793336 (acin1a)
Messenger RNA biogenesis [BR:
ctul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119793336 (acin1a)
Spliceosome [BR:
ctul03041
]
Complex C
Other components
EJC/TREX
119793336 (acin1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
Motif
Other DBs
NCBI-GeneID:
119793336
NCBI-ProteinID:
XP_038156402
LinkDB
All DBs
Position
Unknown
AA seq
1817 aa
AA seq
DB search
MADLEDVTLDGRPLQSLRVADLKAALEERGLSKSGQKNALVKRLKGALMLENLQKTSTPH
VGLQPNSQIGEEMSQNSFIKQYLAKQQELLRQRLEREAREAHDTNEQEVHTQVNNSTPCP
PPAQEVTPAGQHRPPGSSDGEGFFGSVNSGQGNRSQEADVSSPPASGSKAMRAPASEQRS
ERGSASGEVAGESDDDDSEEDGDDDEDWGNRAPRRSLREPARVPAARSGAARSGPARSGP
ARSGAARHPQPQQQHIPSLLSPQLRQPTPPPSPPPELSFPLPDTPKQSPPSPPVARHSPS
SSSSGSSSSGSRSSSPEPQRSGHADRKPGPLTLLARKMESEGAFSGSWHGADGKGDGQDG
GSPSLMAFPGKGPPDGLGSASIIPGTHSAHIQKSGRARKTAAAQERERERVMELERQKAL
ELERQEQEMIEQQLALEREERERVLQRELALEKERQEREEALAKEREEQERAIEMERQRE
LERRRALEERLQREREEKEKREREEIEKALELERAKEKERIEKERALQQERLERERVLEA
KRKEKERLEREKALEQERLEKERIERQKALEQERLEKERIEREKALEQERMEKERIEREK
ALEKERLEKEKREREKALEQERLEKERIQREKALEQERLEKERIEREKALEKERLEKERI
EREKALEQERLEKERIEREKALEQERLEKERIEREKALEQERLEKERIEREKALEQERLE
KERIEREKVLEQERLEKERIEREKALEQERLEKERIEREKALEQERLEKERIEREKVLEQ
ERLEKERIEKEKALEQERLEKERIEREKVLEQERLEKERIEKEKALEQERVEKERIEREK
VLEHERLEKERIEREKALEQERLEKERIEREKALEQERFEKERIEREKALEQECLEKERV
EREKALKREREQALQKEKVEKERALEQEMQDKAMEQEKERGGSVSPPRSGSKLGVSTQAA
PEQQNVRTSLAQTEAQPAKSISTTVSPQSSFKKSRLFRDSPVRPQSGSTSIVIKRPRTFS
DTPQPRAPLATLPTSAGERQPGEHLPSTDQEDAQIHSNQDVSTAPVASTRTGSDSLNANP
TAAHSDPKEERPMMAREEATLPKTAEPVEAEDQSIDSSIPEGKQDREANKEGKKVRRRSL
SDDSSSSDSDSSSSRSSGSSSSSQDQPVSTSRSRPAEKDERGLSGLPVEATESQSENSEA
SPKACLNKKELPVDRMNTADGDVHTMKQAAEETRKEEANRKRKHSEKEEEKEPEGQETEA
PTTDPEKHSESSEEIPKAFSSRKISLSSSKPSPGSTEAEHESGAGAGRKRRWGSSTAVTA
KKPSISITTESLKSLIPDIRPPVGQDAVVDLHLEEAVLSGTEEEERERSDQDLQIRRTVT
QVVPAESQENGQKEAKRIRREDFEEDDSQVEGGSITAHEEQMDTSLPAAVETQSPTLPSQ
DTENNTVTPSDTLIRRSISQQKTGVSITIDDPVRTATQPSPPRGQASNIVHIWNLVRPFT
LGQLKELLSRTGTLVEDGFWINKIKSHCYVTYSTIEEAVATQAALHGVKWPQSNPKFLRV
DFCQQEELDHQRNPSMAVDRPGGEDTGPAPVRGRTSGPPPLLPERDQWAEREREMERRER
ARAEREWDRDKVNEFGKTEGEKEGGSRRSQSRERRRKERAKSKEKKMEKKAEDPPAKLLD
DLFRKTKAVPCIYWLPLTEEQFVQREAARAKETKEREERRKEREKRRKQEEEEEEKKREE
ERKERTKAAAASAENRSEGEKDKGRERDRDRGRDRERDRDRNRENDKRREGYRRPGGSGA
GSSRRSRSRSEPRERRR
NT seq
5454 nt
NT seq
+upstream
nt +downstream
nt
atggcggatctcgaagacgttacgctggacgggagaccgctccagtcgctccgcgtagca
gaccttaaagcggctctggaggagcgggggctgtcgaaaagcggacaaaagaatgctctc
gtcaaaagacttaaaggggctctcatgctggagaatttgcagaaaacctctactccacat
gttggactgcagcctaactctcagattggtgaggaaatgagccagaacagttttatcaaa
cagtatctggccaagcagcaagagctcctgaggcagcgtcttgagagagaggcccgtgaa
gcacatgatacaaatgagcaagaggtccacacacaggttaacaacagtacgccatgccct
cctcctgcacaggaagtcacaccagcagggcagcacagaccacctgggtcctcagatgga
gagggattctttggttcagttaattcaggacagggaaacaggagtcaggaggcagatgtg
tccagtccccctgcttctggctctaaggccatgcgagctcctgcctcagagcagaggtca
gaacgaggttcggcttccggtgaagttgcaggcgaaagcgatgatgatgacagtgaggaa
gatggcgatgatgatgaagactggggaaacagggctccaagaagaagcctcagagaacca
gccagagtacccgcagcacggtctggtgcagcaaggtctggtccagcacgttccggtccg
gcacggtctggtgcagcacgtcatccacaacctcagcagcagcacattccttcccttttg
tcacctcagctccgccaaccaacaccacctccatccccacctccagaattatcatttccc
ttacctgacaccccaaagcagagcccacctagtccccctgttgccaggcactcgccaagc
tcttccagctctggctcctccagcagcggcagccgcagtagcagcccagagccacagaga
agtggccatgctgaccgtaagccaggtcctcttacccttctggcacgtaaaatggagtct
gagggtgccttttctggaagttggcacggtgcggatggtaaaggtgatgggcaagatggc
ggttcaccctcacttatggcgtttcctggcaaagggccaccagatggtctagggtctgcc
agtataattccaggcacacattcagcccacatccaaaaatctgggagagcacgcaaaaca
gctgcagcccaggaaagagagagggaaagggtgatggagctggaaagacaaaaggcactt
gagctggagaggcaagaacaggagatgattgagcaacagttggctttagagagagaagag
agagaaagggtcttgcagcgagagcttgctcttgaaaaagagagacaggagcgggaggag
gctttggctaaagagagggaggagcaagagagggcgatagagatggaaaggcagagagag
cttgagagacgtagagctttggaagaacgtctgcagagagagagggaggagaaggaaaag
cgtgaacgagaggagattgagaaggccttagagctagaaagagccaaggagaaagaacgg
atagagaaagaacgggctcttcagcaagagaggttggagagagagcgggtgttggaagcc
aagagaaaggagaaggaaaggcttgagagagagaaagctcttgagcaggaacgattggaa
aaggaaaggatagagaggcagaaggcactggagcaggaacgattggaaaaggaaaggata
gagagagagaaagctcttgagcaagaaagaatggaaaaggaacgtattgagagggagaaa
gctcttgagaaggaaagattagaaaaggaaaagagagagcgagagaaagcactggagcag
gaacgattggaaaaggaaaggatacagagagagaaagctcttgagcaggaacgattagaa
aaggaaaggattgagagagagaaagctcttgagaaggaaagattagaaaaggaaaggata
gagagagagaaagcccttgaacaggaaaggttggaaaaggaaaggatagagagagagaaa
gcactggagcaggaacgattagaaaaggaaaggatagagagagagaaagcactggagcag
gaacgattagaaaaggaaaggatagagagagagaaagctcttgaacaggagaggttggaa
aaggaaaggattgagagagagaaagttcttgagcaggaacgattagaaaaggaaaggata
gagagagagaaagcactggagcaggaacgattagaaaaggaaaggatagagagagagaaa
gctcttgaacaggaaaggttggaaaaggaaaggattgagagagagaaagttcttgagcag
gaacgattagaaaaggaaaggatagagaaagagaaagctcttgaacaggagaggttggaa
aaggaaaggattgagagagagaaagttcttgagcaggaacgattagaaaaggaaaggata
gagaaagagaaagctcttgaacaggagagggtggaaaaggaaaggattgagagagagaaa
gttcttgagcatgaacgattggaaaaggaaaggatagagagagagaaagctcttgagcag
gaacgtttggaaaaggaaaggatagaaagggagaaagctcttgagcaagaacgctttgaa
aaggaaaggatagagagagagaaagctcttgagcaagaatgcttggaaaaggaaagagtg
gagagggagaaagctcttaaacgagagagagaacaggctttacagaaagaaaaagtagaa
aaagagagggctctagagcaagaaatgcaggacaaggcaatggaacaagagaaagagaga
gggggtagtgtttctcctcctagaagtggctctaagctgggtgtcagtacccaggctgcc
ccagagcagcaaaatgtccgtacttctttggcacagactgaagctcaaccagctaagtct
atttccacaactgtctctccacaatcatcatttaagaagtctcgccttttcagggactct
ccagtacgacctcagtccggttcaacctcgattgttattaagcggcctcgtacattttct
gataccccccagcctcgagcccctcttgccaccttacctacaagcgctggggaacgtcag
ccaggagaacacttgccatcaactgaccaagaagacgcacaaattcattccaaccaagat
gttagcactgcacccgtagcatctacaaggactggttctgacagcctgaacgccaaccca
actgcagctcactcagatcctaaagaagaaaggcccatgatggcgagagaagaggctaca
ttgccaaagactgcagagcctgttgaggcagaagatcaaagcatagattcttcaatccct
gaaggaaagcaggacagagaagcaaataaagaaggaaaaaaagtacgacggagatcttta
tcggatgattcctcttcctcagattctgattcctcatcatcacggtcatctggttcatcg
tcatcttctcaagaccaaccagtctccacctcaaggagtagaccggcggagaaagatgaa
agaggtttatcaggactacctgtggaggctacagagtctcagtctgagaattcagaagca
agccccaaagcctgccttaataaaaaagaactgcctgttgacagaatgaatactgcagat
ggagatgttcacactatgaaacaagcggctgaggaaacaagaaaagaggaagcaaacagg
aagagaaaacacagcgagaaagaagaagaaaaagaacccgaggggcaggagacagaggct
cccactacagatccagagaagcattcagagtccagtgaggagataccaaaggctttctcc
tcacgaaagatctctcttagcagcagtaagccgtcaccaggcagcacggaggccgagcac
gagtctggggccggggcaggtcgcaagaggaggtggggctccagcacagccgtcactgcc
aaaaaaccctccattagtatcaccaccgagtcactcaagtccctgattcctgacatcagg
ccgcctgtcggccaggatgctgttgtagatcttcatcttgaggaagctgttctgtccggt
accgaggaggaagagcgggagcgctctgaccaggaccttcagatccgacgcaccgtcaca
caggtggtgcctgctgaaagccaagaaaatggccaaaaagaagcaaagagaataaggcgg
gaagactttgaggaagatgattctcaggtagaagggggaagtatcacagcccatgaggag
cagatggacacctctctcccagcagctgtagaaactcagtcaccaacactaccaagccaa
gataccgaaaacaacactgtgacacccagcgacaccctcattcgacgctccatcagccag
cagaaaacaggtgtctccatcactatcgatgaccctgtccgcacagcgacgcagccatca
ccaccgcgaggccaagcctccaacattgttcacatctggaacctggtaaggccgttcaca
ctgggacagctgaaggaactgctaagcagaactggcaccctggtggaggatggcttctgg
ataaataaaatcaaatcccactgctatgttacttactctactattgaagaggcagtcgct
acacaggcagctcttcacggagtgaaatggcctcagagcaacccaaagtttcttagagta
gacttctgccagcaggaggagttggaccaccagagaaacccctcgatggccgtggacaga
cctggaggagaggacacaggacctgccccagtgcgtggacgaacatcaggtccgccgcct
ctcctccccgagcgggaccagtgggccgagcgcgagcgtgagatggagcgcagggagcgc
gcccgagcagagcgggagtgggatcgagataaggttaacgagtttgggaaaaccgaaggt
gagaaggagggaggctcacgaaggtcacaatccagagagagacggcgaaaggagagggca
aagagcaaggagaagaagatggaaaagaaagccgaagatccccccgcaaagctgctggat
gacctgttccgcaaaactaaagccgttccctgcatttactggcttcctctcacagaggaa
cagtttgtgcagcgagaagctgcccgagcaaaagagacgaaagagcgcgaggagcggagg
aaagaacgcgagaagagaagaaaacaggaagaagaggaggaggagaagaaaagggaggag
gagcgcaaggagagaacgaaagcagccgccgcctcggcagaaaaccggagtgagggtgag
aaggacaagggccgggagagggacagagaccggggtagagacagggaaagggacagagac
aggaacagggagaacgacaaacgcagggaagggtaccgtaggccagggggcagcggagcg
ggatccagccggcgctcccgcagccggagcgaaccaagagaaaggaggcgctga
DBGET
integrated database retrieval system
