Cyprinodon tularosa (White Sands pupfish): 119793404
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Entry
119793404 CDS
T07496
Symbol
prpf4bb
Name
(RefSeq) pre-mRNA processing factor 4Bb isoform X1
KO
K08827
serine/threonine-protein kinase PRP4 [EC:
2.7.11.1
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ctul01001
]
119793404 (prpf4bb)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ctul03041
]
119793404 (prpf4bb)
Enzymes [BR:
ctul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
119793404 (prpf4bb)
Protein kinases [BR:
ctul01001
]
Serine/threonine kinases: CMGC group
DYRK family [OT]
119793404 (prpf4bb)
Spliceosome [BR:
ctul03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
119793404 (prpf4bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Pox_ser-thr_kin
CoV_S1_C
CSTF_C
Motif
Other DBs
NCBI-GeneID:
119793404
NCBI-ProteinID:
XP_038156515
LinkDB
All DBs
Position
Unknown
AA seq
1014 aa
AA seq
DB search
MADVEMDIMSSRMNNGNEHVKQDLETHDRSGNEDSGDLSEEEGEEEQEQAGTNGEKTEEG
SKHHSSSSGKHKRKKHKHRSKHKKHKHASEEDKERKRKHRHKRRKHKRKETSSPTGDVSF
GSASNRKLESSPSSGNPSLDDRAVLEDLEKQRAMIKAELDSQLMEGKVQSGMGLILQGYN
SGSEEDGDARFRNGEQRPRGSSGKLVSPRGEKSVKSRKDSTDGSKASSKRRSRSKSAEKP
TKETKPEKGTKSSKEAAVKDRGRVRSRSKYRKQSGSTDRFKEKRRSNSPSVRNEQKVSRS
DKRSSPQREDRPNQERPSRRSRSPVRERPSRSEADRDKRPAKSPSKDTSLGKENRSPHRR
GPHSPTRKHSASPRHRDGHHTSASASDRTKHSPSRRSPPRRARSRSPEARRREAERQDSP
VRKRSRADGGLLRDRSREKSPRSASRRRISRSPLRRRSPSPPRRSRSSPRRRSRSPLRRR
SGERDRYGRLRQYRRSTSRDRERRRRRSRDEDKFKGSLSEGMKLDQESSDDEMLEDFEGE
EIDEEALIEQRRQQRMAIVQKYKTANEENNMVSEPNSPQSSTRSRSPSPDDILERVAADV
KEYERENLNTFEASIKAKHNLIAQEKDAANPKKPSAPDMFTESDDMFAAHFDSARMRAAG
VGKDFKENPNLRDNWTDAEGYYRVNIGETLDKRYDVYGYTGQGVFSNVIRARDTARAGQE
VAVKIIRNNELMQKTGLKELEFLRKLNDADPDDKFHCLRLFRHFYHKQHLCLVFEPLSMN
LREVLKKYGKDVGLHIKAVRSYSQQLFLALKLLKRCNILHADIKPDNILVNESKTILKLC
DFGSASHVADNDITPYLVSRFYRAPEIIIGKPYDYGIDMWSVGCTLYELYTGKILLPGSS
NNHMLKLAMDLKGKMPNKMIRKGLFKDQHFDQNLNFLYIEVDKVTEREKVTVMSTINPTK
DMLAELIGGQRLPEDQRKKVMQLKDLLESTLMLDPAKRISINQALQHPFIQEKI
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgttgagatggacatcatgtccagtagaatgaataatggaaacgagcacgta
aagcaagacctggaaacacatgacagaagtggaaatgaagacagcggagacttgtcggaa
gaagagggtgaagaggagcaggagcaggctggaaccaacggtgagaagactgaggaaggg
tccaaacatcacagcagcagcagcgggaaacacaagaggaaaaaacacaagcatcgcagc
aagcacaaaaaacacaagcatgcatccgaggaggacaaggagcgcaaacgcaagcatcgt
cacaaacgtcggaaacacaaacgcaaagagacatcctcgcccaccggggatgtctccttt
ggctctgctagcaacaggaagttggaatcttctccatcctcgggaaatcccagtctggat
gaccgagccgtgttggaggatctggagaaacagagggctatgatcaaagctgaacttgac
agccagctgatggagggaaaggttcagtctggcatgggtttgatccttcagggttataac
tctgggtctgaggaggacggggatgcaaggtttagaaatggagaacagcgtccaagaggc
agctcaggtaaacttgtatcccccagaggggaaaaaagcgtgaaatctagaaaagactca
acggatggcagcaaagctagttctaagcgtcgcagtcggagtaagtctgcagaaaaaccc
accaaggagactaagcctgaaaagggtaccaaaagcagcaaagaagctgctgttaaagac
cgagggcgcgtgaggagcagatcaaagtacagaaaacagtcaggcagcacagatcgcttt
aaggagaaaaggaggtctaattctcccagcgtaaggaatgaacaaaaagtcagtcgctct
gacaaacgttcttctccgcagcgagaagacagaccaaaccaagagagaccgagcagacgg
tctagatcacctgtacgagaacggccgagtcgatcagaagcggaccgggacaagcggcct
gcgaaatccccatctaaggacacctcactgggaaaagagaaccgatctcctcatagacga
gggccccacagcccgacaaggaaacacagcgcttccccccgccacagagatggccaccac
acctctgctagtgcctcagacaggactaaacattctccatccagaaggtccccgcctagg
agagcacgcagccgctcgccagaagccaggaggagggaggcagagaggcaggactcacct
gtgagaaagcgatctcgagctgacggcggactactcagagacagatcgagggagaagagt
cccaggtctgcttcccgtcgcagaattagccgctcccctctaagaaggaggtctccttca
ccaccacgacgctctcgctcctcaccccgaaggcgaagcaggtctccacttagacgcagg
tctggtgagagagacaggtatggaagactccgtcagtatcggcgctcaacttcgagggat
cgagagaggagaagacggcgtagccgagatgaagataagtttaaaggaagcctttcagag
gggatgaaacttgaccaagagtcctcagacgatgaaatgttggaagactttgaaggtgag
gagatcgatgaagaagctcttattgagcagcgtcgtcagcagcgcatggccattgtccag
aaatacaagactgcaaacgaggagaacaacatggtgtctgagccaaacagcccccagagc
agcacacgtagccgatcgccctcacccgatgacatcttggagcgagtcgctgcagatgtc
aaggagtacgaaagggagaatctcaacacgttcgaggccagcatcaaagcaaagcacaac
ctcatcgcccaggagaaagacgcagccaacccaaagaaaccgtcagcccccgatatgttt
acagagtctgatgacatgtttgctgctcatttcgatagtgccagaatgagagcagcaggt
gttggaaaagacttcaaggagaatcctaacctcagggacaactggaccgatgctgaggga
tactacagggtgaacatcggtgagaccctggacaaacgttatgatgtgtacggctacaca
ggccaaggtgtgtttagtaatgtgatcagagccagggacactgccagggctggccaggag
gtggcagtcaagatcatccgaaacaacgagctcatgcagaagacgggtttgaaagagtta
gagttcctcaggaagctgaacgacgctgaccctgatgacaagttccactgccttcgcctt
ttccgccacttctaccacaagcaacatctttgtcttgttttcgagcccctaagcatgaat
ttgcgagaggtgttgaagaaatacggcaaagacgtggggctccacatcaaagctgtgcgt
tcgtacagccaacagctcttcttggctctcaagttgctcaaacgatgcaacatcctccat
gctgacatcaagccagacaacatcctggtgaacgaatccaaaaccatcctgaagctctgc
gactttggatctgcatcacatgttgctgacaatgacatcacaccatatctggtcagccgg
ttttacagggctccggaaattatcataggaaagccttacgactacggcatcgacatgtgg
tccgtcggctgcactttatacgagctgtacaccggcaaaatcctgcttcccggttcttct
aacaatcacatgctcaaactggccatggacctcaagggcaagatgcccaacaagatgatc
cgtaaaggcttgttcaaagaccagcacttcgatcagaacttgaacttcctgtacattgaa
gtagacaaagtgactgagagggagaaagtgactgtgatgagcaccatcaaccccaccaaa
gacatgctggcagaactgataggcggtcagcgactgcctgaggaccagaggaagaaggtc
atgcagctgaaggacctgttggagagcacgctgatgctggacccggctaaacgcatcagc
attaaccaggctctgcagcacccctttatccaggagaaaatctaa
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