KEGG   Cyprinodon tularosa (White Sands pupfish): 119793436
Entry
119793436         CDS       T07496                                 
Symbol
nedd1
Name
(RefSeq) protein NEDD1 isoform X1
  KO
K16547  protein NEDD1
Organism
ctul  Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:ctul00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ctul03036]
    119793436 (nedd1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ctul04812]
    119793436 (nedd1)
Chromosome and associated proteins [BR:ctul03036]
 Eukaryotic type
  Centrosome formation proteins
   Pericentriolar materials (PCM)
    Other PCM proteins
     119793436 (nedd1)
   Microtubules and associated factors
    gamma-tubulin ring complex
     119793436 (nedd1)
Cytoskeleton proteins [BR:ctul04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Gamma-tubulin complex components
     119793436 (nedd1)
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 WD40 WD40_WDHD1_1st WDR55 Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 EIF3I WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_WDR19_1st WD40_MABP1-WDR62_2nd Beta-prop_HPS5 WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_LRRK2 NBCH_WD40 Beta-prop_Vps41 PEP5_VPS11_N Beta-prop_NWD2_C Beta-prop_NUP159_NUP214 WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_VPS8
Other DBs
NCBI-GeneID: 119793436
NCBI-ProteinID: XP_038156583
LinkDB
Position
Unknown
AA seq 666 aa
MEEVTRLVSTGDCVKVWDAVSMAPLEQFNPHSSSHPVAQACWSSNNQYLVSASSSGDKLV
LSSLKSAPVPVVELAEGKKQTRVCLSSSSQFLVSGGLDHCVHIWDLKTKRLHRSLKDHKE
EVTCVSFNANDSCIASGSTSGDLVLYSLTTNLSSRAFGHGSNQPIHDLRLSMVKRSLLGS
VSDSGTVVLWDSNTQRELHVFDGAHKAPGSGLAFSPTSDLLVVSVGLDKKIICYDTASRI
ILRAIRVDSPLTSVDFTLDGTGLVVGSTQGKIYQYDLRNSSAPTKITAAHRTSVTCLRFQ
SNTSRQKSSKLASAKISSTKRSSSKLSSSQTDSAPSSGPAPHRQVASTAGGAAPEVMCRE
AEGQPGVEQLVEKFGVVGRNSLDIFSPPREGPESRTQATSGDTPFGRSHVSGSEMLSRDG
EGQPLVGRASLDIFSPVREDSHSGGGQQRKTPLGTQLGATAGRCYSPLSVFQSPLPIKEE
EPMAASAAEPCDRKSDKNSSSSLEVEPQTPPTTSQETNQSQPGAPFYTPELGLRKASGVP
AQLSYDSPVCRTPPTAAAGRASGSAALAAVSSSLSQNIADMVGQDGAAPLTSLQIHFIQN
MIHETLDEFRTACHQDIINLQVEMIRQFYIQLTEIHGLIEKYSVNESLVEEIEKLREENR
RLRANY
NT seq 2001 nt   +upstreamnt  +downstreamnt
atggaggaggtgacgcgtctggtgtcgactggagactgcgtgaaagtctgggatgcggtt
tccatggcaccactggagcagtttaacccccacagcagcagccatcctgtggctcaggcc
tgctggagttccaacaaccagtacctggtgagcgccagcagcagtggggacaaactggtg
ctttccagtctgaagtcggctccggttccagtggtggaactggctgaagggaaaaaacag
acccgtgtttgtctgagttcttcgtctcagtttctggtgagcggcggtctggaccactgc
gtccacatctgggacctgaagaccaagaggctgcaccgctccctcaaagaccacaaagag
gaagtaacctgtgtgtccttcaacgctaacgacagctgcatcgcctccggctccaccagc
ggggacctggtcctctacagcctgaccaccaacctgtccagcagagccttcggccacggc
agcaaccagcccatccatgacctcaggctgtccatggtgaagcgctccctcctgggaagc
gtctctgatagcggcacagtggttctctgggactccaacactcagagggagctgcacgtc
ttcgacggcgcccacaaggcccccggctcgggtttggccttctccccgaccagcgacctg
ctggtcgtcagcgtcggcctcgacaagaagatcatctgctacgacacggcaagcaggata
atcctgagggcgatccgcgtggacagtcctctgacctcggtggacttcacgctggacggt
accggcctggtggtcgggtccactcaggggaagatctaccagtacgacctgaggaactct
agcgccccgaccaaaatcacagcggctcacagaacctcggtgacatgtctgcgcttccag
agtaacaccagcagacagaagtccagtaaactggcttctgccaagatttcaagcaccaag
agatccagctccaaactgtccagcagccagactgactccgcccccagttcaggccccgcc
ccccacagacaggttgccagcacagcaggaggcgctgctccagaggtgatgtgtcgtgag
gcggaaggccagccaggggtggagcagttggtggagaagttcggagtcgttggaagaaac
agtctggacatcttttctccgcctcgtgaaggtccagaatccaggacccaggcgacgagt
ggagacactccctttggaagatcacatgtttcgggttccgagatgctgtccagagacggg
gagggtcagccgctggtggggcgcgccagcctggacatcttctctccggtcagagaagac
tcccactcaggtggcggccaacaacggaagacgcctctggggacccagctgggggcgact
gcaggacggtgctactcgccgctgtccgtgtttcagtccccgctgccaatcaaggaggag
gagccaatggctgcgtccgctgcggagccatgtgacaggaagtctgataagaacagcagc
tccagcctggaggtggagcctcagactccgcccaccacctcccaggagaccaatcagagc
cagccgggtgcgcctttttacaccccggaactgggcctccgcaaagccagtggtgttcca
gctcagctcagttatgactcgcctgtctgcagaactccgcccaccgcagcagcaggtagg
gcttcaggctctgctgcactggcggcggtgtcgtcctcgctgtcccagaacattgcagat
atggttggacaagacggcgccgctccgctcacctccctgcagatccacttcatccagaac
atgatccacgagacgctggacgagttcaggaccgcctgccaccaggacatcatcaacctg
caggtggaaatgatccggcagttctacattcagctgacagagatccacggtctgattgag
aaatactccgtcaacgagtccctggtggaggagatcgagaagctgcgagaggaaaaccgc
cggctcagagcaaactactga

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