Cyprinodon tularosa (White Sands pupfish): 119793719
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Entry
119793719 CDS
T07496
Symbol
rnf40
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ctul04121
]
119793719 (rnf40)
Enzymes [BR:
ctul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119793719 (rnf40)
Ubiquitin system [BR:
ctul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
119793719 (rnf40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-RING_5
SpoIIE
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
119793719
NCBI-ProteinID:
XP_038156878
LinkDB
All DBs
Position
Unknown
AA seq
1001 aa
AA seq
DB search
MSGTGGGKRPPGGDSPPGPPEKKSKKEEKTTTTLIEPIRIAGVSSTEEMDMKVMQFKNKK
LCERLEQRQALEDELREKIEKLEKRQATDDTTLLIVNRYWSQLEESVNVLRKSIEPETPP
PSAPAPPAAPPPDTPMEDSGVCLSSPTSVVAPAPPPEAHSEDWQTDQQRQPEERQEDHQD
EPQPPPPAGAEELVTPTESPSDSKADPSPPPPLSENAKGFLTTLEQSGEEELSLHLQDRM
LFSKEAIAHLVRVFDRLHSRIDDMCKAIQAAAGEDGGQSEASLNPSLLEQNIRLRDLATL
LQGRHHKMSMEYNEWVDKVTSAETKVSEMETTVEDLQWDIEKLRNREQKLNKHLAEAMEQ
LKSGYSSTGSSGGLAGGQITLNIQKFESLNAELEHNQELANSRMAELEKLQLELQEAVRE
SEKLKMDLRNIPEEVVKETSEYKCLQSQFSLLYNESLGVKTQLDEARALLLTTKNAHLRQ
IEHMESDELSLQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGPINREMRHL
ISSLQNHNLQLKGDVQRYKRKLRETQMEINKLRCQSGDAGVLILEESTSDSIDVKKEEDE
DQEEEEERRKELERQRMREREREREREAERERERERERERQRSDDRKDSDSLKMLRVELK
KAQESQKEMKLLLDMYKSAPKEQRDKVQLMAAERKSKAEVEDLRMRVRELEERERKESKK
LADEDALRKIRVAEETIEHLQKKLAATKQEEEALLSEMDVTGQAFEDMQEQNSRLLQQLR
EKDDANFKLMSERIKSNQIYKLLKEEKEELADQVLTFKTQVDAQLLVVQKLEEKEGVLQT
TLAALEKELSVRTQALELNKRKAVEAAQLAEDLKVQLEHTQAKLKEIQVSVAENRTARER
ESSNLKRAQEDLSRLRRKLEKQKKVEVYSDADEILQEEINQYKAKLRCPCCNTRDKETVL
TKCFHVFCYECLKMRYDTRQRKCPKCNCAFGANDFHRIYIT
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtaccgggggagggaagcgccctccgggaggggacagtcctcctgggccacct
gagaaaaagagcaagaaagaggagaaaaccaccacgactctcattgaacctatccgcata
gctggagtctcctccacggaggaaatggacatgaaggtaatgcagtttaagaacaaaaag
ctctgtgagcgcttggagcagaggcaagcgttggaagatgagctacgagagaaaattgaa
aagctggagaaaagacaagccactgatgacaccacccttctgattgtcaatcggtactgg
tcccagttggaagaaagcgtgaatgttctgcgcaaatctatagagcctgaaacgccacca
ccgtctgctcctgccccgcccgcagcgccgcccccagacacaccgatggaggacagtgga
gtctgtctgtcttcaccaacctcggtggtcgctccagcaccgcccccagaggcccacagt
gaagattggcaaacagatcagcaacgtcagccagaggagcgtcaagaagatcaccaggat
gaaccgcagccccctcccccagctggagcagaggaactagtgacaccaactgagtcgcca
tcagattcaaaagcagatccatcacctcctcctcctctgagtgagaatgcaaaaggattt
ttgaccacgctggagcagagcggcgaggaggagctgtccttacacctccaggatcgcatg
ctgttcagcaaggaggccatagcgcacttggtccgtgtttttgacaggctacacagtcgc
attgatgacatgtgcaaggccatccaggctgcagcaggggaggatggtggccaatctgag
gctagtctgaaccccagcctgttggagcagaacattagactgagagatctggccaccctt
ctgcaggggcgacaccacaagatgtccatggagtacaatgagtgggtggacaaagtgacg
agtgcagaaactaaagtctctgagatggagacaacagtggaggatcttcagtgggacatt
gagaagcttcgaaacagggagcagaagctcaataaacacttggccgaggccatggagcag
cttaagtctggatacagcagcaccggcagctctggcggcttagctggaggacagataaca
ctgaacattcagaagtttgagagtctaaatgcagagctagagcataaccaggagttggct
aatagtcgcatggcagagctggaaaagctgcagctggagctccaggaggctgtgagagag
agtgagaagctcaagatggacctgcgtaatattccagaagaagttgtgaaagaaacctca
gaatataaatgtttgcagtctcagttctcgctgctctacaatgaatctcttggagttaag
actcagctggatgaagcgcgggctctcctgctcactaccaaaaatgctcatctcagacag
atcgagcacatggagagtgacgagttgtccctgcagaagaagctgcgaacagaggtcatc
cagctagaggacactttggcccaagttcgcaaagaatatgagatgcttcgcatagagttt
gagcagaatctcgcggcaaatgaacaagcaggaccaataaacagggagatgcgacacttg
atcagcagccttcaaaaccacaacctgcagctgaaaggtgacgtgcagcgatacaagaga
aaactacgggaaacacagatggagatcaataagctacgctgtcagagtggcgatgcaggg
gttctgattctagaggagtcaacaagcgacagcattgatgttaaaaaggaagaggacgaa
gaccaggaggaagaggaagagaggaggaaggaactggagagacagcggatgcgggagagg
gagagggagagagagagagaagcagaacgggaacgagagagggagcgcgagagagagcga
cagcgcagcgacgacaggaaggactctgattctctgaagatgctccgagttgaactcaag
aaagctcaggagtcccagaaggagatgaagctcctgttggacatgtataaatcagctcca
aaggagcaaagagacaaagtgcagctaatggcagctgagcgcaaatcgaaggcagaggtg
gaagacctgaggatgcgagtgcgagaactggaggagagggagaggaaagagagcaagaag
ctggctgatgaggatgccctgaggaagatccgtgtggcagaagagaccatcgagcatctg
caaaaaaaacttgcagccaccaagcaggaggaggaggccctactgagcgagatggatgta
accggacaggcttttgaggacatgcaggagcagaacagcaggctgttgcagcagttacgg
gagaaagacgatgccaactttaagctgatgagtgaaaggatcaaatccaaccagatctac
aagctgctgaaggaggagaaagaggagctggctgaccaagttctcacgttcaaaacccag
gtggatgcccagctgcttgttgtgcagaagcttgaagagaaagagggagtcctgcaaacc
acactggccgctttggagaaggagctgtctgtcagaacacaagcgctagaactcaacaag
aggaaggcagtggaggcagcacagttggcagaagacctgaaggtgcagctggaacacacg
caggccaagctgaaagagatccaggtctctgtggctgagaaccgcaccgctcgggagagg
gagagcagcaaccttaaacgagctcaggaggatctgtcccggctgaggaggaagctggag
aagcagaagaaggtagaggtttactctgatgcagatgagatcctacaggaggagatcaat
cagtacaaggccaagctgcgttgcccctgctgcaacacaagggacaaggagaccgtcctc
accaagtgtttccatgtcttctgctacgagtgcctgaagatgcgctacgacacccgacag
aggaagtgccccaagtgtaactgtgccttcggagcaaacgacttccaccgcatctacatc
acctga
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integrated database retrieval system
