Cyprinodon tularosa (White Sands pupfish): 119793749
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Entry
119793749 CDS
T07496
Symbol
ift140
Name
(RefSeq) intraflagellar transport protein 140 homolog
KO
K19672
intraflagellar transport protein 140
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ctul03037
]
119793749 (ift140)
Cilium and associated proteins [BR:
ctul03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
119793749 (ift140)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR19_1st
ANAPC4_WD40
WD40_Prp19
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_HPS5
TPR_IFT80_172
TPR_GEMI5
Beta-prop_EML
Beta-prop_CAF1B_HIR1
TPR_COPA_B
Beta-prop_WDR35_TULP_N
PPR_2
Beta-prop_WDR75_1st
UBA_2
Motif
Other DBs
NCBI-GeneID:
119793749
NCBI-ProteinID:
XP_038156918
LinkDB
All DBs
Position
Unknown
AA seq
1445 aa
AA seq
DB search
MSVYFDHRIKAPENSNHPSYLTWHSTLPILAVASSSPGSGGSVDLYLQQGDCVEDCHVER
AHQATVLRWHPLKPVLALGWENGEVMLLTHPSGDQTLLTSAHTGSIALLEWSGSGSRLVT
GDQNGALAVWKLDARGRLIGNSLAKYDFSKPLTCCIFKPASPGDDVAMLARASVSGDESA
LEKFSWKGAPLKMGPQEGLGFYVSTSDGNVYAMDEQCKPSQLFRAESPIKKLLYIENKDA
LVVITDTLTLSQYTVLREGGAHEFMKVKLSSKAGQNVDIVCTENSLLIAATGEPTVRIWD
LERDDNYALSLNENMGFERGEIISCISYCAPKEILAAGTSHGRIAMWKMVMQHSSIGSYR
ADIKALWKLQTPTEVDGNVIQLQWGSNQNLLAANNSKTVLILCEHVMSAHFSQQVAAVQL
TPTQLSITQFTTGVTLPLQSIMQIKGVCVSKDSVTVWDGKKVSVYELSPTGLHMTGSFAC
DSQVVVVHDQNIYTVETNKVQIHTPQGTVKQLLTFSKAEGNPVLLSVCQSYLVVGTDAAN
IRVFNLSRRNAKPLCDAKNLAEHITNLGALRSVKCNANGSQVSILISQVNGRPDHKVYFY
HIEMHTVTHFDFFTGRPSSGFSQRDESDKQKFQEHEFSGRFPVSHFWDESEPRLFVCETA
PVGSEKSANGHSDLENLSVVTLFCTQEHGIMLLDCFSEPSGVQALLALDVPYYYFSCKPG
EGITEASLPSVQSEPKAGAPTPSPQMVSRRPLRDFVGLENCEKRTHDAMLNFSFYLTVGD
MDEAFKSIKLIKSKAVWENMARMCVKTHRLDVARVCLGNMGNARAAKAVKDAEAEPEPEA
QVAMLAIQLGMLEDAEKLYKSCQRFDLLNAFYQASNKWNQALETAETHDRINMHTTFYEY
AKYLEFRGKKDLALDFYEKSDTHRAEVPRMLQEDPASLEIYVNKAKDKKIYKWWAQYLES
QSDMERALQYYEHAEDYLSLVRVHCYMGNIQEASQIANSTGDRAASYHLARHYESHDDIM
QAVHFYTQAQAYNNAIRLCKENNLDFQLMNLALLSNPEDMMEAACYYEEKGKHMDRAVTL
YHKAGYVSRALELAIATEQFDALQLIAEELNENSDPALFSRCSEFFIQHSQYDKAVQMLA
ASRKYSQAVELCLSQNLNITEDLLERIHLTESKDLSKEACNKLLEKIADCCMSQGSYHLA
SKLYTQAGNKHRAMKALLKSGDREKIAFYANLSRKKELFIMAANYFQSLDWQKNPENLKY
IIEFYTKGDAPHLLGGFYEACAQVEIDDYQNYEKALDALADAIKCLSKAKQLPRGQQEGR
LAELQQKINLIKKFVHIRRLYPEDPAEAVKLCEALLEEPELDPPVRIGDAFGFLIDHYCQ
QGHFQMAYKKLEELQKLLPSQSIRYYISQDSLNTLQKEMGVHLDSDEYKHVLEGNDDEVE
EDLTV
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgtatttcgatcaccgtattaaggcccctgaaaacagcaatcatccctcttat
ctgacatggcactcaactcttcccatcctggctgtggcctcaagcagtcctggttccggt
ggcagcgttgacctttacctacaacagggtgactgtgtggaggactgccacgtagagcga
gctcaccaggccactgtgctgcgctggcatcccttaaagccagtcctggcattgggatgg
gagaatggagaggtgatgctcctcacacacccatctggagatcaaactttgctaaccagt
gcacatacaggcagcattgcacttctggaatggagtggttctggaagccgcctggtaacc
ggagaccagaatggagctctagcagtctggaaattagatgccagagggcgactaatagga
aattccctagccaagtatgatttcagcaaacctttaacatgctgcattttcaagcctgcc
tctcctggagatgatgtggcaatgttggctcgagcatcagtgagtggagatgaatctgct
ctggagaagttcagctggaagggagcgcctctgaagatgggtcctcaggagggacttgga
ttctatgttagtacttcagatggaaatgtctatgctatggatgaacagtgtaaaccaagc
caactttttagggcagaaagccccatcaagaaacttctctacattgaaaacaaagatgca
ctggtagtcatcacagacaccctgacgttgtcgcagtacacagtgttacgtgaaggtggc
gcacatgagtttatgaaggttaagttaagcagcaaagccgggcagaacgttgacatcgtt
tgcacagagaacagcctcctaattgcagcaacaggggaaccaactgttagaatatgggac
ctagagagagatgacaactatgctttgtctcttaatgagaatatgggatttgagagaggg
gagataatcagctgtatttcttactgtgcacccaaagaaatcctggcggctggaacctcc
catggccgcatagcaatgtggaagatggtgatgcagcacagcagcatcggcagctacaga
gcagacattaaagccctgtggaaattacagacgcctacggaagtagatgggaatgtcatc
cagctgcagtggggctccaatcagaacctgttggctgcgaacaactcaaaaacggttctg
atcctatgtgagcatgtgatgtcggcccacttcagtcagcaggtggcagcagtgcagctt
actccaactcagctgagcatcactcagttcaccacaggagtgacgctacctcttcagtct
ataatgcaaatcaaaggagtgtgtgttagcaaggactcagtgaccgtctgggacgggaaa
aaggtctctgtgtatgagctctcacccacgggtctgcacatgacaggatcctttgcttgt
gactctcaagttgttgttgtacacgatcagaacatttacactgtcgaaacgaacaaagtt
caaattcacacccctcagggcacagtgaagcagcttttaactttctccaaagcagagggc
aaccctgtcctactcagtgtgtgccagtcataccttgttgtcggtaccgacgcagcaaac
attagagttttcaacctctccagaagaaatgccaaacctctctgcgatgctaaaaatttg
gcagaacacatcaccaatttaggagccctgaggtctgtcaagtgcaatgccaatggcagc
caagttagcatcctaatctctcaggtaaacgggcgaccagatcacaaagtgtatttctat
cacattgagatgcacactgtgacacactttgacttcttcactggcagaccttcctctggt
ttctctcagcgagatgaaagtgataagcagaagtttcaagaacatgaattcagtggtcgc
tttcctgtgtctcacttctgggatgaaagtgaacctcgtctctttgtttgtgagaccgcg
ccagtcggttctgaaaaatccgcaaatggtcattcagatttggagaacttgtccgtggtg
acgctcttctgtacacaggagcatgggatcatgctgctggactgcttctccgaaccttca
ggcgttcaagccctcctcgccctcgatgtgccgtactattactttagctgcaagcctggt
gaggggatcaccgaggcttcgttaccctcagttcagagtgagccaaaagcaggggcccct
actccatcccctcaaatggtgtccagacgacctctaagagactttgtgggcctggagaat
tgtgagaagcgtacccatgatgccatgctgaacttcagcttctacctgacggtgggggac
atggatgaagccttcaagtcgatcaagctcatcaaaagtaaagcggtgtgggaaaacatg
gcacggatgtgtgtgaagactcaccggcttgacgttgcccgagtgtgccttgggaatatg
ggaaatgccagggcagcaaaagccgtgaaggatgccgaggccgagcctgaaccagaagcc
caggtggccatgttggccattcagcttggcatgctggaagatgcggaaaagctttacaag
agctgtcaacgctttgacctgctgaacgccttctaccaggcttccaacaaatggaatcaa
gctttggagacggccgagacgcatgatcgcatcaatatgcacaccaccttctacgaatat
gccaaatacctggagttcaggggcaagaaggatttggctcttgatttctatgagaaatca
gacacacaccgagccgaggtgcccagaatgctccaggaggacccggcgtctctggagatt
tatgttaacaaagccaaagataagaaaatctataagtggtgggcccagtacctggagagc
caatcagacatggagagagcgctgcagtactatgagcatgctgaggactacctgtccctg
gttcgagttcactgctacatggggaacattcaggaggcctcccagatagccaacagcaca
ggtgacagagcagcatcgtaccacctggcaaggcactacgagagtcacgatgatattatg
caagcagtccacttctacacccaagcccaggcctacaacaatgctatacgactttgtaag
gagaacaacctagatttccagctgatgaatctggctctacttagtaacccagaggacatg
atggaggctgcatgttactatgaggagaagggcaaacacatggatcgagcagtcacactc
taccacaaggctggttacgtctccagagctttagagttggcaatcgccactgagcagttt
gatgcccttcagctcatcgcagaggagctgaacgaaaactctgaccctgctctcttctct
cgctgctctgaatttttcatccaacattcccagtatgacaaggcggtgcagatgctggcg
gcaagcaggaagtactctcaagccgtggagctttgtttgagccagaacctgaatatcaca
gaggacctcctggagagaatacatctcactgaatcaaaggatctgtctaaagaggcctgc
aataaactgctggagaagatagcggactgctgcatgagtcagggcagctaccatctggca
tccaagttgtacacacaagcaggcaacaaacacagggccatgaaggcactcctgaaatcg
ggcgacagagaaaaaatagccttctatgccaacctctcccgaaagaaagagcttttcata
atggctgccaactatttccagtccctggactggcagaagaacccggaaaacctgaagtat
attattgaattctacactaagggcgatgctccgcacctgcttggtggcttctatgaagct
tgtgctcaggtggaaattgatgattaccagaactatgaaaaggctctggatgctttagcc
gatgctatcaagtgtctgtccaaagcaaagcaacttccaagaggacagcaggaagggagg
ttggctgaactgcagcaaaagatcaacctcatcaagaagtttgtccacatacggaggtta
tatcctgaggatccagctgaggcagtgaagttatgcgaagccttgctggaggaaccagag
ttagacccacctgtcaggattggagatgcattcggtttcttgattgaccattactgccag
caaggccactttcaaatggcctacaagaagttagaggagctccaaaagttgctgccatcc
cagagcatcagatattacatcagccaggacagcctaaacaccttgcagaaggagatgggt
gttcacttagacagtgacgaatataaacatgtactggagggaaacgacgacgaggtggag
gaggatcttactgtttaa
DBGET
integrated database retrieval system
