Cyprinodon tularosa (White Sands pupfish): 119793755
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Entry
119793755 CDS
T07496
Symbol
tnrc6b
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctul03019
]
119793755 (tnrc6b)
03036 Chromosome and associated proteins [BR:
ctul03036
]
119793755 (tnrc6b)
Messenger RNA biogenesis [BR:
ctul03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119793755 (tnrc6b)
Chromosome and associated proteins [BR:
ctul03036
]
Eukaryotic type
Gene silencing
piRNA pathway
119793755 (tnrc6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
119793755
NCBI-ProteinID:
XP_038156929
LinkDB
All DBs
Position
Unknown
AA seq
2078 aa
AA seq
DB search
MEDKKRKKEEKRKREASQKVAEQKNKVTDVTKPAAAQSPATQSSSASPSPGPIPATASPS
PATSDPGGAATPSQGGNNAKRLAVANGQPASNTSSSSTAGGLGAAGNGSTGSGGGTQAPQ
QPSRYMPREVPPRFRCQQDHKVLLKRGQPPLSSMLLGGGGGGGDGPNPNMAAVSDSASSL
ALTSSIAASTSNYANSMWGTSSGGQASSQGKEKVIVDGNDLEEWPSIAGSDGGNGGNSGM
PVNSISASGNQPSLTSSFSLPNECMQLSNSAAWGTTASQGQLGGGAAVAAAGPLLQQPSS
LSKAPAVHGSHDASGPVDGSSGIPGANFSPNANPSAWPALVQQDSPAASGEGALTAFHHQ
VSEGSANNSASMGLGGGAVGVLGGHPSISVNPSSAHQHQLHQMQSRDREAGGGKWDSESA
GPKISGGEGIGGGMDHGVGGGRVGVGDPNVATSWRGQPSYSAAYSKTGVSRTDGWEGGES
GKLGAAEGDKGTSGWGYPSSTCGSAENGGNCGQTSGATQGGWGLSVVGADRGASGSGWGG
SSAGIGGSNPAPDEMGNCSSNSSSSGGSTVGNPPTASSSLTAAAANRAWDNQKGEGEVGE
WGDGARGRGGSSSSGGNSRSGSMTNSNRIRRQAPNAEAALQNLLSRSDLDPRVLSNSGWG
QTQIRQNTSWDVEEQEGPNKAVPPSASSKHPAALGGPTQYSSGPRTLSTDSKGPGVSPSL
IPPTGSSGESWESSSSNTSSSGASLSGRAPPPTSSNMRHLGVSQSGPVTSSAPGLASGIM
PGTQAKATGWVGGGNGAGDNLDSKEWGNEEWRSNSQAEKGGGWGDVGQKGDSSGGGWGDG
HHEKGAGSWKDMGGSDEGSGWGSKSKVGAGKNWLEQESKSSSGGGWGDERRNGGHSGGDS
GGGGWGNWDSSAPRRTWGTGGGGGGGGGMDGVGGIGPKPHQGWSGGNKMHQMPNSQSGSV
SGPQAQLQQQQSQPRNQNPQLQQALDQGVMQGGGGRKLASQAQTQNQSSGWTSGPLPCAP
GGGGGPEPSGWEEPSPQSISRKSEIDDGTSAWGDPTHYNYKPVNLWDKNSGSASQQPHGQ
SQAQQQQQQQGAPVQQQPSRQAAALTEPSGWSSTSPASPSVDNGTAAWGKPNEAPTGWGD
PDDTGGKTGSWGNASNSIRSASKSMQDGWGDKESSMAASRHSSWEDEEEGSSMWNSTGSQ
GSGSSWGQGSNGGWAQSNPVKKTSSKGPLKAGGDSWMSPINRQFSNMGILNDDSSGPNID
LPSGSIQEKKMEAEKRGIGLNDFNGDMRKGGRGGGPSGGGIYRPPGSKDPAQLDAGSYYD
KTLHLISQDGCLGEEAPYSLYSPPTAYKPHTLFNHSVPFRQGSHSIFGNAGGMSQSRHQP
SVPPMNQSPGMRAQVPHQFLSPQVPGSMLKPMPPPSGSVGGVGGMGGVAGVGGGVFAPQL
SPQHLAMLSSIYPPQIQLQLACQLLLQQQQQQPPQQQQILQNQRKFTPNVRQQNDPQQLA
RIMAVLQQQRQHQQIGGLGSGPKLSPSHHSGMGPKLPGSETLPHPGLGGSVAELQQKAFG
PYSGQSLFNEAGFGSAVNLPGLEHGASMMGGPGGMKDLGAQQSRFKWMMEGNCSPDTSSP
DNLYHKNGPVTPIKMPGSSPYSQFDIVGGDGPSDNWHRTPGNKMGAKTTNTPSWPPEFQP
GVPWKGIDRVDPESDPYMTPGSMMGNAVSPGLNDSEHQLLQDNTGIALNDSTPPLNTLLP
SPGAWPYSASDILNNAHNSAKYTEYKTSWPPEPPGHKSWKASRGSSQAQLSRPPPGLASQ
KQASPSPWSGGAPRSAGRGWGSGSSNTGSAWSDGSSRESCWLVLSNLTPQIDGSTLRTIC
MQHGPLLTFHLGLTQGTALIRYCSKQEAAKAQSALHMCVLGNTTILAEFVSEEEVGRYIA
HSQAGSEGNAAASAGLGPTAASAVGTGSNGGSCERGGAGGLSGGGVEGASPAGVATSSSS
GWQSLDSTGSSSDPSAAQGPALGIFTQWSSNGSGVGGAGAMEAGRQGLWGGIGGMSGAGY
PSGGSSLWGSPALEDRHQMGSLAALLPGDLLGGGADSI
NT seq
6237 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaagaaaaggaaaaaagaagaaaaacggaaaagggaagcctctcagaaggtt
gcagagcaaaaaaacaaagtgacagacgtgaccaagccggctgctgcccagtctcctgcc
acccaaagcagctcagcctcccccagccctggacccatccctgccactgcctctccatct
ccagcgacctcagaccctggcggcgctgccaccccgtctcagggcggcaacaatgccaag
cgcctggcagtggccaacggacaacccgcctccaacaccagttcttcctccaccgctggt
ggcctcggcgctgctggaaacggcagtacaggtagtggaggcggaacccaagcacctcag
cagccatcgcgctacatgccgagagaagtgccaccgcggtttcgctgccagcaggaccat
aaagtgctactgaagaggggtcagccgccgctgtcctccatgctgctgggaggaggggga
ggaggaggggatggcccaaacccaaatatggctgctgtctcagattctgcatcttcattg
gctctcacctcatcaattgctgcttctacttctaattatgcaaattccatgtgggggaca
agctcaggcggccaggcttcctctcagggcaaggagaaagtcattgtcgatggcaacgac
ttggaggagtggcctagtattgctggcagtgacggaggaaacggcggcaacagcggaatg
cctgtgaatagcatcagtgcctctggcaaccaaccctcactcacttcctcattctctttg
cccaatgaatgtatgcagttgtctaacagtgcggcatgggggacaactgcctcccagggt
cagctaggaggaggtgctgcagtagctgcagctgggcctctgctacagcagccctcctca
ctttccaaagcccccgctgtgcacgggtcccatgatgccagtggccccgtggatggtagc
agtggaattccaggtgccaatttcagtccaaatgccaacccttcagcctggcctgctctg
gtgcagcaggacagccccgctgcttcaggggaaggagctctgactgccttccatcaccag
gtctccgaagggtccgccaacaactctgcttccatggggctgggaggcggggcagtcggt
gttctggggggtcacccatctatatctgtgaatccgtcaagcgcccatcagcaccaactt
caccaaatgcaatccagagacagagaggctgggggagggaagtgggacagtgaatcagcc
ggaccaaaaatttcagggggggaagggattgggggaggaatggaccatggtgttggagga
ggcagggttggtgtgggagaccctaacgttgccacctcctggagaggccaaccttcttac
tctgcagcttactccaaaacgggtgtctcaagaactgacggatgggaaggtggggagagt
gggaagttaggagcagcagaaggggataaagggacatcgggttgggggtaccctagttct
acttgtggcagtgctgaaaatgggggtaattgtggtcaaacctccggggcaactcaggga
gggtgggggttatcagtagtcggagcggatcgaggggcttctggtagtggttggggaggc
agctctgctggcattggtggatccaatccagcacctgatgaaatgggaaactgcagtagt
aacagcagcagcagtggtggaagcactgtgggcaacccccctactgcttcttcatcatta
acagccgctgctgccaacagagcctgggacaatcagaaaggagaaggcgaagtgggggaa
tggggcgacggagccagaggaagagggggatcttcatctagcggtgggaattccagaagc
ggaagcatgactaacagtaatcgtattcgccgacaggcaccaaacgctgaagctgcctta
cagaacttgctaagtcggtctgatctggatcctcgggtcctgtccaactcgggctggggc
cagacacagatccggcaaaacacatcctgggatgttgaggaacaagaaggacccaacaag
gctgtaccgccttcagcttcatcgaaacacccggctgctcttggtggtcctacccaatat
tctagtggacccaggaccctaagcactgattcaaagggtccaggtgttagtccctccttg
attcctcccactgggtcatctggagagagttgggagagcagcagcagcaacaccagcagt
agtggagcatctttgtctgggagagcccccccacctacatcctccaacatgaggcatctt
ggcgtctcacaatctgggccagtgacctcatctgcacctggtctggcgtctgggataatg
ccgggaacccaggccaaagctacgggttgggttggtggaggaaatggtgccggggataat
cttgattccaaggaatgggggaacgaagaatggagaagtaacagtcaagcagaaaagggc
ggaggatggggggacgttgggcagaaaggtgactcatcgggtggaggatggggagatggt
caccatgaaaaaggagcagggagttggaaagacatgggcgggagtgatgagggaagtggg
tggggatcaaaatcgaaggttggggcaggaaaaaactggttggagcaagaatcaaaatcc
agcagtggaggaggttggggcgatgagaggagaaacggagggcactcagggggagattca
ggtggaggtggctgggggaactgggacagcagtgcaccccggaggacctggggcacaggg
ggagggggtggcggagggggagggatggatggggttggaggcatagggcctaaaccccat
cagggttggagtggaggaaacaaaatgcaccagatgccaaacagccagtcgggctccgtc
tcaggcccacaggcacaactgcaacagcaacaatcacagccccgcaatcagaatccacag
ctgcagcaagcattggaccaaggggttatgcaagggggcggggggaggaagctcgcctct
caagctcagacacagaaccaaagctcaggctggacctcgggacctcttccttgcgccccc
ggaggtggcggcggacctgaaccaagcggctgggaagaaccctccccgcagtctataagc
aggaagagcgagatagatgatggaacatcagcatggggagacccaacccattacaactat
aagccggtgaacctgtgggataaaaacagcggctctgctagccagcagccacatggacag
agtcaggctcagcagcagcagcagcagcagggagctcctgttcagcagcagcccagccgg
caggctgcagcgctcacagaaccttcaggctggagtagcacttctcctgctagtccttca
gtagacaacggtacagcagcctgggggaaacccaatgaagctcccactggctggggcgat
cctgatgataccggagggaagacgggatcctggggaaacgcttcaaactcaatcagatct
gcttcaaagtctatgcaagatggctggggggacaaggagagttcgatggcagcttcacgc
cactctagctgggaggatgaagaagaaggcagcagtatgtggaacagcacaggttcccaa
ggaagtggctcatcttggggacaaggaagcaatggaggctgggctcaaagtaacccagtg
aaaaagaccagcagcaagggtcctctaaaggctggaggggattcgtggatgagccccatc
aacaggcagttctccaatatgggaattctgaacgatgattccagtggcccaaacattgac
ctgccttcaggttctattcaggagaagaaaatggaggctgagaaacgaggcataggactg
aatgatttcaacggagacatgagaaaaggaggaagaggagggggtccgagtggaggaggg
atttatcgccctcctgggtccaaagacccagcacaattggatgcaggctcttattatgac
aagaccttgcatttgatcagtcaggatgggtgccttggggaggaggctccttactctctg
tactcaccacccactgcctacaagccccataccctcttcaaccactctgtcccctttaga
caaggcagtcacagtatctttggcaatgctggaggaatgtcccagtcaaggcatcaacca
agtgtccccccaatgaaccagtccccagggatgcgagcacaagtgcctcatcagttcctg
tcacctcaggtgccagggtccatgctgaagccgatgccccctcccagtggcagtgtggga
ggtgttggtggcatgggaggggtagctggagttgggggaggagtttttgctccacagcta
tcccctcagcatctcgccatgctcagcagcatctacccacctcagatccagttgcagctg
gcttgtcagcttttactgcagcagcagcagcaacagccaccacagcaacaacagatactg
caaaaccagaggaagttcacaccaaatgtgcggcagcagaatgaccctcaacagctggcc
aggataatggcggtcctccagcagcagaggcagcaccagcagatcggaggcttaggcagc
ggccctaagctctccccctcccaccacagcggaatgggtccaaagcttcctggaagtgaa
acgttgcctcacccaggcctgggcggatcagtggccgagctgcagcagaaagcgtttgga
ccgtactctggtcagtctctgtttaatgaagcaggatttggttctgctgtgaaccttccg
ggtctggaacatggagcctccatgatgggggggcctggaggcatgaaggacctaggggct
cagcagtcccgttttaaatggatgatggagggaaactgctcccctgatacttcctcaccc
gacaacttgtatcacaaaaatggtcctgtcaccccgataaagatgccaggaagctcacct
tactcccagtttgacatagtgggtggtgatggaccgagtgacaactggcatcgcacccct
ggcaacaagatgggtgccaagactaccaacacaccaagctggcctcctgagttccagcct
ggggtgccatggaaaggaatcgatcgtgttgatccagagtctgatccatacatgacgcct
gggagcatgatgggaaatgcagtttcccccggtctcaacgacagcgagcaccagttgtta
caagacaataccggtatagctttgaatgattccacccctcccctgaacaccttgctgcct
tcacctggtgcctggccctacagtgcctcagacatccttaacaatgcacacaactcagca
aagtacacagagtacaagaccagctggcccccagaacctccaggacacaagtcttggaaa
gccagccgtggcagcagccaggcccagttatcccgtccacctcccggcctcgccagtcag
aagcaggcctctccctccccttggtcaggaggcgctcctcgctcggctggaagaggatgg
ggaagcggctcgagcaacactggctcagcctggagtgacggaagctctcgggaaagctgc
tggttggtgctcagtaacctcacaccccagatcgacggttccactctgaggaccatctgc
atgcagcacggacccctgctgacctttcacctcggcctgacccaaggcactgctctgatt
cgctactgctccaaacaggaggcagccaaggcccagagtgcactccacatgtgtgttctg
ggtaacaccaccatcctggcagagtttgtgagcgaggaggaggttgggcgttatattgca
cattcccaggctggaagcgaaggaaacgctgctgcctctgcaggcttggggcccacagca
gcctctgcagtcggaaccggcagcaatggaggaagctgcgaaaggggcggggccggaggc
ctcagcgggggaggagtagaaggcgcctccccggctggagtagcaacgtcttccagctca
gggtggcaaagtctggacagtacaggcagctcatcggacccgtccgccgcacaggggccc
gcgctcggcatcttcacgcagtggagcagcaacggatccggggtgggaggagctggagcc
atggaggcagggcggcagggtctgtggggcgggatcgggggaatgagcggggcaggttac
cccagcggcggcagcagtctctggggttctccagcacttgaggatcgtcaccagatgggc
agcctcgccgcgctgctgccaggggacctgctgggcgggggcgccgactcaatctga
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integrated database retrieval system
