Cyprinodon tularosa (White Sands pupfish): 119793959
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Entry
119793959 CDS
T07496
Symbol
snx1a
Name
(RefSeq) sorting nexin-1a
KO
K17917
sorting nexin-1/2
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119793959 (snx1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ctul04131
]
119793959 (snx1a)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ctul04990
]
119793959 (snx1a)
Membrane trafficking [BR:
ctul04131
]
Endocytosis
Macropinocytosis
Sorting nexins
119793959 (snx1a)
Domain-containing proteins not elsewhere classified [BR:
ctul04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
119793959 (snx1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps5
PX
Sorting_nexin
Phage_T7_Gp13
NAD_binding_1
Motif
Other DBs
NCBI-GeneID:
119793959
NCBI-ProteinID:
XP_038157204
LinkDB
All DBs
Position
Unknown
AA seq
736 aa
AA seq
DB search
MATSSERSPPPFPDTEDQDAQDPEEVRGRDSDEDDGEELFLSATNTPMATKENTSAPASQ
PIDLMSDPLMEPLSSHTENKSPSEMFEDLTKDVSAASAATAESPLDQASDDFVDVLGSKA
AAEREEVDVTAEGSDGATDLLGDGKSNAKQETPAAPIMDLGGSSDISTQQPAVCDPLVDL
LGDSTAASASSAIKPSGAVIDLFDDEGSDFFTGPPPTQTAKQPQKSLFGDGDEDLFGEPL
GAVSKKATSMEQKEKSAPAPPAAAAPPADLFTEEAVGSAPNSRAVNSKTNGVHSEEDSDL
FAEATVELSLDSPRTERRKEAATKPSTSVSATAGLAKSQPAPPEEIEEEEEELQDKFDIN
VFVKDPEKIGDGMNAYMAYKVSTQTTLPMFRSKTFTVKRRFSDFLGLYEKLSEKHGPNGL
IVPPPPEKSLLGMTKVKVGKEDSSSADFHERRRGALERYLQRVVNHPMLLQDPDVREFLE
KEELPRAHSTQALSGAGFLKMITKATDAVSKMTIKMNESDVWFEEKLQEVESADQQFRKL
HALVESLVVHRKELSLNTASFAKSAAMLGSAEDNTALSRALSQLAEVEDKMEQLHQDQAS
NDTFSFAELIADFTRLLGAVRGSFDQRMKAWQRWQDAQAMLQKKRETEAKLLWANKPDKL
QLAKEEIVEWEAKVTQYEQEFERVSATVRKEVVRFEKEKTKNFKRQIITYLESLLQSQHQ
LIKYWEAFLPEAKAIA
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccagctcagagcgcagccctcctccgttcccagacaccgaggaccaggatgct
caggatcctgaagaagtccgaggccgagacagcgacgaggacgacggtgaagaacttttc
ctgagtgcgaccaacactcccatggccacgaaggagaacacgtctgcacccgccagtcag
cccatcgacctcatgagcgatcctttgatggagcccctcagcagccacacggaaaacaaa
tctccctctgaaatgttcgaggacctgactaaggatgtgtcagcggcgtctgctgccaca
gcagagagccctttggatcaggcctcggatgatttcgttgatgtccttggaagtaaagcg
gcagctgaaagagaagaagtggatgttacagctgaaggcagcgatggggcaacagattta
ctcggtgatggaaaaagcaatgccaaacaggaaacccctgctgctccgataatggacctg
ggtggctcgtcagacatcagcacacagcaaccagccgtctgcgacccgctggtggacctt
ctgggggactcaacagctgcctctgcgtccagtgccataaaacccagcggggcagtgatc
gacctcttcgacgacgagggaagtgactttttcaccggaccgcctccgactcaaactgcc
aagcagcctcagaaaagcctgtttggtgacggcgatgaggatctgttcggcgagccgctg
ggggccgtgtcgaagaaagccaccagtatggagcagaaggagaaatccgccccggcccct
ccagctgccgcagcaccacctgcagacctcttcaccgaggaagcagtcggctcggcacca
aacagcagagcggtgaactccaagaccaacggagtccattctgaggaggattcagattta
tttgctgaagccacggtggagctttctctggatagtccaaggaccgagaggaggaaagag
gcagcaaccaaaccctccacctccgtctcagcaaccgcaggcctcgccaaatcccagcct
gctcccccagaagagattgaagaagaggaagaggagcttcaggataaatttgacattaat
gtctttgtgaaagaccctgaaaaaataggtgacggtatgaatgcctacatggcctataaa
gtatcaacacagaccaccctgcccatgttccgcagcaaaaccttcacggtgaagcggcgc
ttcagcgacttcctcggcctctacgagaagctctcagaaaaacatggtcccaacggtcta
atcgtgcctccgcctccagagaaaagcctcctagggatgacaaaagtaaaggtgggaaag
gaagattcctcatccgcagactttcatgaaaggaggaggggtgctttggaaagatatctc
cagagggtggtgaatcacccgatgctcctgcaagaccctgatgtcagagagtttctggag
aaagaggaactgcccagagctcacagcacccaggcactgagcggagcgggattcctgaaa
atgatcaccaaggcaacagatgctgtcagtaaaatgaccatcaagatgaatgagtcggat
gtgtggtttgaggagaaactgcaggaggtggaatcagcagatcagcagtttaggaagctc
catgctctggttgagtccctggttgttcacagaaaagagctgtccctgaacacagccagc
tttgccaagagtgctgccatgctgggcagcgcagaggacaacaccgccctgtcccgagcc
ctctctcagctggccgaggtggaggacaagatggagcagctccaccaggaccaagcttcc
aacgacacattcagcttcgctgaactgatcgcagatttcacccgcctgctgggagcagtc
cgggggtcgtttgaccagcggatgaaggcgtggcagcgctggcaggacgctcaggctatg
ctgcagaagaagagggagacggaggccaaactgttgtgggccaacaagcccgacaagctg
cagctagccaaggaggagattgttgagtgggaggccaaagtgactcagtatgagcaagaa
tttgagagagtttctgcaaccgtgcgcaaggaagtcgtccgcttcgagaaagaaaagacc
aagaattttaagaggcagataatcacatacctggagtctctccttcagtctcagcatcag
ctgatcaagtattgggaggcgttcctacctgaggccaaagccatcgcctag
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integrated database retrieval system
