Cyprinodon tularosa (White Sands pupfish): 119793968
Help
Entry
119793968 CDS
T07496
Symbol
acanb
Name
(RefSeq) aggrecan core protein
KO
K06792
aggrecan 1
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ctul00535
]
119793968 (acanb)
00536 Glycosaminoglycan binding proteins [BR:
ctul00536
]
119793968 (acanb)
04091 Lectins [BR:
ctul04091
]
119793968 (acanb)
Proteoglycans [BR:
ctul00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
119793968 (acanb)
Glycosaminoglycan binding proteins [BR:
ctul00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
119793968 (acanb)
Lectins [BR:
ctul04091
]
C-Type lectins
Lecticans
119793968 (acanb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
V-set
UL45
Ig_2
I-set
Ig_CD22
Ig_3
PGDH_inter
Motif
Other DBs
NCBI-GeneID:
119793968
NCBI-ProteinID:
XP_038157230
LinkDB
All DBs
Position
Unknown
AA seq
1235 aa
AA seq
DB search
MTTLLLLCISLPIILATTALEEPDAIHVSIPVESPLRPLLGSKVQVPCYFHQNTVDDPGA
PTSAPLAHRIKWTYITKEKTAQILVATKGKISVATEYLDRVTLVSYPQVPSDATIEITEL
SSKDSGTYRCEVTMGIEGSSDNVDIQVQGIVFHYRAISTRYTLTFDRAKEACVMNGATIA
TPAQLQAAYDDGYHQCDAGWLSDQTVRYPIHEPREPCFGDKHNFPGVRTYGIRDVNETYD
VYCFAEKMSGRVFYSMSIDKFSFHEAKDQCVKLGARLATTGELYLAWKDGMDVCNAGWLA
DRSVRYPINIPRPQCGGGLVGVRTVYLYPNQTGYPYPDSRYDAICFQESDDEGAVPGRTT
PLPDISFIPTDQAYLTTTSPVIPEIKSGGVVTLPPVTLPGEDVEMGPKGVVFHYRPITGR
YTLTFLEAQQACQSIGAIIASPQQLFAAFERGLHQCDAGWLRDQTVRYPIVSPRENCAGN
LPNLPGVRSYGQRPASERYDVYCYVGSLEGEVFFTTDYDSFAYDEAVEHCQKLNSTLATP
GQLYAAWKRGLDKCRPGWLKDRSVRYPITTPKSYCGGGQAGVHTIYTFPNQTGFPDEHSR
YDAYCFKAHIPVVDSVKDRIEKKIIITIDSAPPDQTDMDGYNETALNTTGDVFDNETIST
SQVFPLDKSPPPRVPVDGSGSGSAEPSGSGGPSGESSTSTTNGDTSGSGQDITFSGHFDS
SSGEPSASGSPEEGRGSTNFFTSGDFGSTSGTESGSGSFTPGSGSSSGSGDISGSGSGDE
TVVTFVNGKMVDLSKTIKNDTKQEVNQGGIDTSGESSTSGSGDMSASGSGGFSGISLIDY
SGIDLTPQPSGDQEVSRSGSGYYSGFSSGFPSGFPSGFPIDFSSGFSSGFPSGVSGSGSS
SGDPLLKYKVDILIEQKLVFTEEGRGKVEISGEGSGSTILPEISGGSTPMSGSGAAPTKA
YIEYVPTFDQSGSGDSDEETDIPVYSVIPDSVFARPTTPPEVSLVTPMGLKNPIVNQEGC
PDGWIEFAGSCYLHSTDRLTWSEAEQYCKDFRGHLVSIGSQEEQQFVNSNGENYQWIGLN
DKDVQNVFQWTDGSPLTFENWRPNQPDNYFGSGEDCVVMIWHEGGEWNDVPCNYHLPYTC
KIGPVTCGEPPEVEHGSPMGSSRESYPINSITRYQCDPGFTQRHLSVIHCLANGQWEEPL
VQCIEAGANSNRLHKRFLRRRSKDVSSQQEQRAQL
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccctacttctgttgtgcatttctctgcccatcatcttggccacaacagcactg
gaagagcctgacgctatacatgtcagcatccctgttgagtcgcctctccgtcccctgctg
ggaagcaaggtacaggtgccatgctacttccaccaaaacacagtggatgacccaggagca
cccacctctgcccctttagcccaccgaatcaaatggacctatatcaccaaggagaaaact
gctcaaattctggtagcaacaaagggaaagatctctgtggctacagaatatctggacagg
gtgactctggtcagctacccgcaggttcctagtgatgctaccattgaaataacagaactg
agttctaaagactctggaacctaccgctgtgaggtgaccatgggcatcgagggtagctct
gacaatgtggacatccaggttcagggcattgtatttcactatcgtgccatctccacccgg
tacaccctaacgttcgatagagccaaagaagcctgtgtcatgaatggagccaccattgct
actcctgcgcaacttcaagctgcttatgacgatggataccaccagtgtgatgctggatgg
ctttcagatcaaaccgtgaggtaccccattcacgagcctcgagaaccttgctttggagat
aagcataactttcctggagtgaggacctatggcattagagacgttaacgaaacttatgac
gtgtactgctttgctgagaagatgtcaggcagagttttctactccatgtccattgacaag
tttagtttccatgaagctaaagaccagtgtgtcaaactgggtgccaggctagccactact
ggagagctttacctcgcctggaaggatggcatggatgtgtgtaacgctggatggctagca
gacagaagtgtacgctacccaatcaacatccccagacctcaatgtggagggggacttgta
ggagtgagaactgtctacttgtaccccaaccaaactggatacccctacccagactcacgc
tatgatgcaatctgcttccaagagagtgacgatgaaggtgctgtgcctgggaggaccaca
cccttacctgacatcagttttatacccactgatcaggcctacctaaccacaacatcacct
gtgatcccagagatcaagtccggaggggtagtaactctccccccagtgacactgccaggt
gaagatgtggagatgggtcccaaaggtgtggttttccactacagaccaatcactggtcgt
tatactctaacttttttggaagctcagcaggcttgccagagcattggagccatcattgcc
agcccccagcagctgtttgcagcctttgaaagaggccttcaccaatgtgacgctggatgg
ttacgtgaccaaactgtgcggtatccaatcgtgtcccccagagagaactgtgctggtaac
ctgccaaaccttccaggagtgagatcctacggccagagaccagccagcgaacgctacgat
gtctattgttatgtgggcagtttggaaggtgaggtcttcttcaccaccgactatgacagc
ttcgcttacgatgaagctgtggagcattgtcagaagctgaacagcaccctggccacgccg
gggcagctgtacgccgcctggaaacgaggactggacaaatgccgcccaggctggctcaag
gatcgtagcgtccgttaccccatcacaacccccaaatcttactgtggaggtggccaggcc
ggggtgcacaccatctacaccttccccaaccagacgggatttcctgatgagcactcacgc
tacgatgcctactgcttcaaagctcacattcctgttgtggattcagttaaagataggatc
gagaagaaaatcatcataacaattgattctgctccacccgaccaaacggatatggatgga
tacaatgaaactgctttgaataccaccggagatgtgtttgacaacgagacgataagtaca
agtcaagtttttcctttagacaaatcccctcccccacgagttccagttgatgggtcaggt
tctggttcagctgagccttcgggcagcggagggccctctggagaatcttctacatccacc
accaacggtgacacatctgggtcaggacaggacatcaccttcagcgggcactttgattca
tcttctggcgagccgtctgcatctggaagcccagaggaggggaggggcagtacaaatttc
ttcacctctggagattttggtagcacatctggaactgaatctggatctggcagctttaca
ccaggatcaggttccagcagtggaagtggggacatcagtggtagtggaagtggtgatgag
accgtggtgacctttgtgaatggaaagatggtcgatttgtccaaaaccataaaaaatgac
acaaagcaggaggttaaccagggaggaatcgatactagtggggaatcaagtacttctgga
tcaggagatatgtctgcttctggttctggtgggttctctggtatttcactcattgattac
agtggaattgacctgacacctcagccatctggagaccaagaggtgtccagatctggatcg
gggtactacagtggtttttccagtggttttcccagtggttttcctagtggttttcccatt
gacttttccagtggcttttccagcggttttccatccggtgtttcaggaagcggctcttct
tctggagaccctcttctaaagtataaagtagacatcttgattgaacaaaaacttgtcttt
actgaagagggccggggtaaggtggagataagcggggaaggcagcgggtcaacaatcctt
cctgaaatcagtggaggatcaacaccaatgtccggaagcggagcggctcctacaaaggct
tatatagaatatgttcccacttttgaccaatcgggatctggagattctgatgaagagact
gacattccggtttattcagtcatccctgactcagtctttgctaggccaaccacacctcct
gaagtttcattagtgactccgatgggtttgaagaatcctatagtcaatcaagagggctgt
cctgacggctggatagagtttgctggcagctgttatctccactccactgacagactcacc
tggtctgaagccgagcagtactgtaaggacttcagaggccacctggtcagcattggttca
caggaggagcagcagtttgtcaactccaatggtgagaactaccagtggatcggacttaat
gacaaagatgtgcagaatgttttccagtggacagacgggagtcctctgacttttgagaac
tggaggcccaaccagccagataactactttggttctggtgaggattgtgtggtgatgatc
tggcatgaaggcggcgagtggaatgatgtgccctgcaattaccaccttccttacacctgc
aagattggaccagtcacgtgtggagaaccaccagaggttgaacatggcagcccgatgggc
agcagcagagagagctaccccattaactctataacccgctatcagtgtgacccaggcttc
acacagcgccacctgtcagtcatacactgtctggcaaacggacagtgggaagagccactg
gtgcagtgcatagaagccggagccaacagcaacaggctacacaaaaggttcctgaggaga
cggagtaaagatgtcagcagccaacaggaacagagggcgcagctctga
DBGET
integrated database retrieval system
