| Entry |
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| Symbol |
polr1a
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| Name |
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
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| KO |
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| Organism |
ctul Cyprinodon tularosa (White Sands pupfish)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:ctul00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
119794099 (polr1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:ctul03021]
119794099 (polr1a)
Enzymes [BR:ctul01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
119794099 (polr1a)
Transcription machinery [BR:ctul03021]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
119794099 (polr1a)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
Unknown
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| AA seq |
1686 aa
MLFSKEVPWRRLEGMTFGLYSTEEIRKLSVKAISNSRFLDAVGNVAPNSLYDLALGPADI
KEVCSTCCQDFNNCPGHFGHVELPLPVYNPLFFDKLYLLIRGSCLACHMLTCPRAAIHLL
VNQLRLVEHGAMQEVYVIESVLNQHLEENPKATGDEIKRLLSEFTSSVVGANSKASQGSK
PIKHLVEKRSSLINDFWKVQMKTRKCPYCGGGRSTVRREHNSKLIVTMPTGMQTGENTGL
LAGTRVFLTASTAREHISKVWEKEGFFLKFLFPGLEESTGSEGQKGFYPDLFFLELLVVP
PCRYRPINRLGDQMFTNGQTVNMQAVMKDCGVIRKLLALLAGEKHAEAEEEPLEAEDQTF
LSGISGATLADKLYNTWIRLQSHVNIVFDSDMDKLMADKYPGIRQILEKKDGLFRKHMMG
KRVDYAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVKELRQAVLNGPNVHPGA
SMVINEDGRKTILSATDPSQREAVAKQLLTPSTGPHKMPMKIVNRHIKNGDVLLLNRQPT
LHRPSIQAHCARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQSELGRAEAYTLVSTN
HQYLVPKDGKPLAGLIQDHMVSGTKMTIRGCFFTKDQYTELVYRGLTDKVGRVKLLPPSI
VKPQQLWTGKQVVSTLLLNIIPEKAVPLNLVGKAKIPGKAWIQLPPRAAPGYKPESMCES
QVVIRQGELLVGVLDKAHYGSSAYGLVHCCYELYGGETSGKLLSCLARLFTAYLQLYRGF
TLGVEDILVKPGANRERKRIIEESLKIGTKALQAAFSLPANVDPAEARSRWQDAHLSPDQ
REFSLADHKFKEVANQVNNDINKVCMPVGLHTPFPHNNLQLMVQSGAKGSTVNTMQISCL
LGQIELEGRRPPLMPSGKFLPCFQPYDPSPGAGGFVSGRFLTGIKPQEFFFHCMAGREGL
VDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVIQFLYGEDGLDIPKTQFLQPR
QFPFIEDNYEVIRRSQDLDSVLARLDPQNASHHFAAVQRWRAKRELACARRGAFLLYSQK
KLAKLREALQVTEPVPNQDPAVLQLVKDWHSLDEASRAKYRKRSSRCPEPSLGLFRPDVC
FGSVSENFYDITEKYLQNRSSTAEGDVETQSLRRLLHYKWQRSLCDPGEAVGLLAAQSIG
EPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASSNIKTPMMSVPVLNTKRALKRAKT
LRKQLSRVCLTEVLQKVDVVETLLIDGYQKLRSFKVKFHFLPPERYRDDKLLTPHQILRY
MESRFFRLLLDAIKKRTAKLASIAVETRRVSPRDKDLDEPGTAGVEDGEAEEEPEIADDQ
GEEGDADASDAKRKSKQEEEVDYESEDEDEGGDAEEDQKEEEAEVNNQSNTVEESQPEVA
VARLERKKKKKQQVEMGEGDEHSVQMRVNSVLSSNSAIQNYSFDQQEELWCEVELTVPVN
NVHFDLTSVLSTLAQNAVIMETRGLTRCLLSETTTKSGEKQMLLNTEGINMHEIFKHSDI
LDINKLYSNEVHAMANTYGIEVALKVIEKEIKDVFAVYGIEVDPRHLSLVADYMCFEGVY
KPLNRHAIMSNSSPLQQMTFETSYKFLKQATMLGSHDQLVSPSACLVVGKVVRGGTGLFE
LKQPLQ |
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| NT seq |
5061 nt +upstreamnt +downstreamnt
atgctgttttctaaagaggtgccatggcggcggctagagggcatgacctttggtttgtac
tcgaccgaggaaataaggaagctgagcgtgaaagccatctcaaactccaggttcctggat
gctgtgggaaatgtggccccaaacagtttatatgatctggccctggggccagcagacatc
aaagaggtctgttcaacctgctgtcaggatttcaacaactgtccaggacactttggacac
gtagagctgcctctcccagtatacaaccctctgttctttgataaactctacctgttgatt
cgcggttcatgtctggcgtgccacatgctgacgtgtccccgggccgccatccacctgctg
gtgaaccagctgcggttagtggagcacggcgccatgcaggaggtctacgtcatcgagagc
gttctcaatcagcacctggaggaaaaccccaaagctacaggagatgagatcaagcggctg
ctgagtgagtttaccagcagcgtagttggagcgaactccaaagcttcgcagggatccaaa
cctattaaacacctggttgagaagaggagcagtctgataaacgacttctggaaggtccag
atgaaaaccaggaagtgtccttactgcggtggcggcaggtcaacggtgcgacgggaacac
aacagcaagctgatcgtcaccatgccaacgggaatgcaaactggagaaaacacaggtctg
ctggctggaaccagagtcttcctcactgccagtacggccagagagcacatcagtaaagtc
tgggagaaagaaggtttcttcctgaagtttctgtttcccgggctggaggagagcacaggc
tcagaggggcagaagggtttctatccagacctgttcttcctggagctgctggtggtccca
ccctgcaggtaccgtcccatcaaccggctgggcgaccagatgtttaccaacggtcagacc
gtcaacatgcaggctgtgatgaaggactgtggggtcatcagaaaacttctggctctacta
gcaggagagaaacacgcagaggcggaggaagagcctttggaggcagaagatcagacgttt
ctgtcaggaataagcggagcgacgttggcagataaactgtataacacgtggatccgcctg
cagagccatgttaacattgtctttgacagcgacatggacaagctgatggccgacaaatac
cccgggatcagacagatcctggagaagaaggatggattgttccggaaacacatgatgggc
aaacgagtggattacgctgcacggtccgtcatctgtcctgacatgtatattggaacaaac
gagatcgggatccccatggtgtttgccaccaagctgacgtacccacagcccgtcactcca
tggaacgtgaaagagctccggcaggccgtccttaacgggcccaacgtccaccccggcgcc
tccatggtgatcaacgaagacggcaggaagaccatcctgtcagccaccgacccctcacag
agggaggcggttgccaagcaactgctgacaccctctacaggtccacacaagatgcccatg
aagatcgtgaatcgccacatcaagaacggagacgtactgttactcaacagacaaccgact
ctgcatagaccttcgattcaagctcactgcgctcgcatcttaccaggagagaaggttctg
aggctccactacgccaactgcaaagcctacaacgctgactttgatggagacgagatgaac
gctcacttccctcagagcgagcttggcagagcagaggcctacactctagttagcaccaac
catcagtacctggtccccaaggacggtaaacctttagcaggtcttatccaggaccacatg
gtttcggggaccaagatgaccataagaggctgcttcttcaccaaagaccagtatacagag
ctggtgtacagaggactgacagacaaagtagggcgagtaaagctactacctccgagcatc
gtcaaaccacagcagctgtggacagggaagcaggtggtctccaccttgctgctgaacatc
atcccagagaaagccgtccctctaaacctcgtgggcaaagcaaaaatcccaggcaaggct
tggatccagctcccacctcgagctgctcctggctacaaaccagagagcatgtgtgagtca
caggtggtgatccgtcagggcgagctgttagtcggcgttctggacaaggctcactacggc
tcctctgcttacggtttggtccactgctgctacgagctctacggaggagagaccagtggg
aaactgctcagctgtctggctcgcctctttaccgcttacctccagctctacagaggcttc
actctgggagtggaagacattctggtgaaacctggagccaacagagagaggaaaagaatc
atcgaagaatctctgaaaattggcaccaaggccctccaggcagctttcagcctccctgcc
aacgtggatccagctgaagctcggagccgatggcaggacgcccacctcagccccgaccag
agagagttcagcttggccgaccacaaattcaaagaagtggccaaccaagtcaacaatgac
atcaacaaggtgtgtatgcctgtaggactgcacaccccgttcccacacaacaacctgcag
ctcatggtccagtcaggagcaaagggatccacagtgaacaccatgcagatctcctgtctg
ctgggtcagatcgagctggagggccgcaggcctccgctgatgccttcagggaagtttcta
ccttgtttccagccgtacgacccttcgcccggagcaggaggcttcgtttctggacggttc
ctcacgggcatcaaacctcaggagtttttcttccactgcatggccggcagagaaggattg
gtagacacagctgtgaaaacatccagatcaggatacctgcagagatgcatcatcaagcat
ctggagggtttggtagtgcagtacgacctgaccgtcagagacagcgacggatctgtcatc
cagttcctgtacggtgaggacgggctagacatccctaagacccagttcctgcagccgagg
cagttccccttcatcgaggacaactatgaggtcatcaggaggtcccaggacctggacagt
gttctggctcgtttggaccctcagaatgcatctcaccactttgcagccgttcagcgctgg
agagcaaagagagagctggcgtgtgctcgcagaggagcctttttactatattctcagaag
aagttagcaaagttaagagaggctctccaggtaacggagccagtgcccaaccaggatcct
gcagtgctccagctggtgaaggattggcactctctggatgaagccagcagagccaaatac
agaaagaggtcgtcccggtgccctgaaccgtccctgggcttgtttaggccagacgtctgc
ttcggatctgtttctgaaaacttctacgatatcacagagaaataccttcaaaacagaagc
agcacagcagagggcgacgtggagacccagagcctgcgccggctgcttcattataagtgg
cagcgatccctgtgtgaccctggtgaggcagtggggctgctggcggctcagtccatagga
gagccctccacccagatgaccctcaacaccttccactttgcaggcagaggagagatgaac
gtcactttgggaatccctcgactcagagagatcctgatggtggccagttccaacattaaa
acccccatgatgagtgttccagtgctcaacaccaagagagctttgaagagagcaaagacg
ctgaggaagcagctcagcagagtctgcctcactgaggtgctgcagaaggtagacgtggtc
gagacccttttgatcgatggttatcaaaaactgcgctccttcaaggtcaagttccacttc
ctgcctcctgagcgttaccgtgacgacaagctgcttaccccccaccagatcctgcgctac
atggaatcgaggttcttccgtctcctcctggatgccatcaaaaagcgcaccgccaagtta
gcctccatcgccgtggagaccaggagggtctcccccagagataaagacctggacgagcct
ggcacagcgggggtagaagatggagaagcagaggaggagccagagatcgccgatgatcag
ggggaagaaggagacgccgacgcatcagatgccaagaggaagagcaaacaggaggaggag
gtagactatgaaagcgaagacgaggacgaaggtggcgatgctgaggaggatcagaaggag
gaggaggccgaggtgaacaaccaatctaacactgtggaggagtcccagccggaggtggca
gtagctagattagagcgcaagaagaagaagaagcagcaagtggaaatgggggaaggagac
gaacattcggtccagatgagggttaactcggttctctcatcaaactcggccatccagaat
tattccttcgatcagcaggaagaactgtggtgtgaggtggagctgaccgtccccgtcaac
aacgtgcacttcgacctgacctcggtcctgtccaccctggcccagaacgcagtcatcatg
gagaccaggggcctgacgcggtgcctgctcagcgaaaccacgaccaagtctggcgaaaag
cagatgcttctcaacacagagggcatcaacatgcacgagatcttcaagcacagcgacatc
ctggacatcaacaagctgtactccaatgaggtccacgccatggccaacacctatgggatc
gaagtggctctgaaggtcatcgagaaggagatcaaggacgtctttgcggtctatggtatc
gaggtggaccccaggcacctgtccctggtggctgattacatgtgttttgaaggcgtctac
aagcctttaaaccgacacgccataatgtccaactcctcgccgctgcagcagatgaccttt
gagaccagctacaagttcctgaagcaggccaccatgctggggtcacatgatcagctggtg
tctccttcagcctgcttggtcgttgggaaggtggtcagaggtggaactggcctgtttgaa
ctgaagcagcctctacagtag |
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