Cyprinodon tularosa (White Sands pupfish): 119794216
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Entry
119794216 CDS
T07496
Symbol
zcchc7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119794216 (zcchc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctul03019
]
119794216 (zcchc7)
03016 Transfer RNA biogenesis [BR:
ctul03016
]
119794216 (zcchc7)
Messenger RNA biogenesis [BR:
ctul03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
119794216 (zcchc7)
Transfer RNA biogenesis [BR:
ctul03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
119794216 (zcchc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_2
zf-CCHC_3
Zn_ribbon_2
Motif
Other DBs
NCBI-GeneID:
119794216
NCBI-ProteinID:
XP_038157593
LinkDB
All DBs
Position
Unknown
AA seq
645 aa
AA seq
DB search
MYSAYQDREELEDELYQEDSGLSEADSELEFHLYSQLHYSSNAGEIEELEAGAEKQYESQ
ENRQGDLLEKTRDGDQELKYKKGSRPTPSSNDHLKVKKKAALKKKGKIKSRGQKLSSSRF
EEVIVIDSSPDVISISDEDNDSDDDGVCAFKGQGSHQLQTSTPAQKALQKGRSPLVPVAV
LSSSTESSESQSESDSSDSTDADDLENWMILGQGKQDGDRSISLNVEGGSYSSGTDAEEE
EEEEEGGSWIVSEKDKEAQIFNKGRGPRTFLQRPSSRYYTGKSVHCRNCNKTGHLSKNCP
DPKKLTPCFLCGTTDHLASQCPNKHCNNCGQPGHLFNSCSERAYWHKQCHRCSMRGHFID
ACPEIWRQYHITTKRGPPVKQQEDGGAKSPAYCYNCSKKGHLGHECKQQRMFSGVFPTYP
FINHYDTLKDINRRQHRIEMKVKDIGRNGAPSAASPAPPTPGPPKKKQKLNHYKDSPNSK
RTPHQTPNRANPNHIIFNDDDFDSTPRRKPDKSPKSGSSAKPWKPKRPLPATRDPLPLSK
LVVDEASDFPRGGGPQGDKEGKMKKKSKFRKKQGNLFMSEEQKDWKPGHVYRTGEERSRG
SKPKNQMGEKKKQRKFPNKTPKKQAGKPMYEEDNLFLIKQRKRSR
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcgcgtaccaggaccgcgaggagttggaggatgagctctatcaagaggactct
ggcctgtcggaggccgacagtgagctggagttccacctctacagccagctccactactcc
tcaaacgctggagagatcgaggagctggaggcaggagcagagaagcagtatgagagtcag
gaaaaccggcagggagatctgctcgaaaaaaccagagatggagaccaagaactgaaatac
aaaaaagggagcagacctacaccatctagcaatgaccatttaaaggtgaagaagaaggcc
gcattaaagaagaaagggaaaattaaatcaagaggtcagaagttatcatcatcacgcttt
gaggaggtcattgtcatcgactccagccctgatgtcatctccatctctgatgaggacaac
gacagtgatgatgatggtgtctgtgctttcaagggtcaaggttcgcaccagctgcagact
tccacccctgcacaaaaggcgttgcagaaaggaaggagtcccttggttccggtcgctgtg
ctttccagcagcacagaatcctctgaatcccagtcagaatcggattcatcagattccact
gatgcagatgatctggagaactggatgatcctgggtcaagggaagcaggatggagaccgg
tccatctcactgaatgtagagggaggatcttacagcagtggcacagatgctgaggaagaa
gaagaagaagaagaaggaggaagttggattgtttcagagaaagataaagaggctcagatc
tttaacaaaggccgtggtcccaggactttcctgcagcgtccgtccagcagatactacact
gggaagagtgtccactgtagaaactgcaacaagacaggacatctctccaagaactgccct
gaccctaaaaagttgacgccttgctttctttgtgggacaacggatcacctggccagtcag
tgtcctaataagcactgcaataactgtggccagcctggacacctcttcaactcctgcagc
gagagagcttattggcacaaacagtgccatcgctgcagcatgaggggacacttcattgat
gcttgtccagagatatggagacagtaccacatcacaactaagagaggtcctcctgtgaag
caacaggaagacggcggcgctaagtctcccgcatattgctacaactgttccaagaaagga
cacttgggtcatgaatgtaaacaacagaggatgttcagtggggtttttcccacctacccc
ttcatcaatcactacgacacgttgaaggacatcaaccgcagacaacacagaatagagatg
aaggttaaagatataggaagaaatggagctccatctgctgcgtctcccgcccctccaact
cctggaccaccaaaaaagaaacaaaaactcaaccattacaaagacagccccaactctaag
cgtacgccccaccaaaccccaaacagagcaaatcctaaccacatcatcttcaacgatgat
gactttgattctacacccagaagaaagccggataaatcacccaaaagtgggagcagtgca
aaaccatggaagcctaaaaggcctcttcctgctacaagagacccattgccattaagtaaa
ctagttgttgatgaagcaagtgactttcccagagggggaggccctcaaggagacaaggag
gggaaaatgaaaaagaagagcaagttcagaaaaaaacaggggaacttatttatgtcagag
gagcaaaaagactggaaaccagggcacgtttacaggactggagaggagaggagtaggggc
tcgaaaccaaagaatcagatgggagagaagaaaaaacagagaaaatttcccaacaagact
cctaaaaaacaagcgggcaaaccgatgtatgaagaagataatctgtttctcattaagcag
cggaaacgcagcagatag
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