Cyprinodon tularosa (White Sands pupfish): 119794304
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Entry
119794304 CDS
T07496
Name
(RefSeq) RNA-binding protein 39-like
KO
K13091
RNA-binding protein 23/39
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ctul03041
]
119794304
Spliceosome [BR:
ctul03041
]
Common components
Common spliceosomal components
General mRNP proteins
119794304
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RBD_DEAH11
RRM_7
Motif
Other DBs
NCBI-GeneID:
119794304
NCBI-ProteinID:
XP_038157720
LinkDB
All DBs
Position
Unknown
AA seq
505 aa
AA seq
DB search
MMADDLDIEAMLEAPYRKEDSKNQSPDGPEEHSKRKKRSQSRSRDRKRSRSREKKRSRSR
DRKRSRSRDRRRSRSRERRRSRSRERGGRYKDHHKHRRRSRSKSPIRKEKTPPRLPLDNL
TPEERDARTVFCMQLAARIRPRDLEEFFSAVGKVRDVRMISDRNSRRSKGIAYIEFVEAS
SVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAAAAANNLQKATFGPMRLYVGSLHFNIT
EEMLRGIFEPFGRIEHIQLIMDSETGRSKGYGFITFADAECAKKALEQLNGFELAGRPMK
LGHVSERTDISTASSFLDNDELDRSGVELGTTGRLQLMARLAEGTGMQIPPAAQQALQMS
GAIAIGALAAVSAAMNPTLNMNMNTPALNLPSQPLATHCFQLSNMFNPNSENAPGWELDI
QHDVIEECNKHGGVVHIYVDKNSSEGNVYVKCPSIPSAMAAVNALHGRYFGGKIITAAYV
PLPTYHNLFPESVTATQLLVPPPRR
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggatgacttggacatcgaggcgatgctggaggctccatacagaaaggaggac
agcaagaaccagagccctgatggaccggaggagcacagcaagaggaagaaacgtagccag
agtcgcagcagagacaggaagcgcagccgcagtcgggaaaagaaaaggagccggagtcga
gatcgcaaacgcagccgtagccgagacagacgcaggagtcgcagccgggagcgcagacgc
agtcgcagccgagagcggggtgggcgctacaaagaccaccacaagcaccgcagacgatcg
aggagtaagagtccaatcaggaaggagaagacaccacccaggctgcctttagacaatctg
accccagaggagcgggatgctcgcaccgttttctgcatgcagcttgcagccaggatacgc
ccacgggacctggaagagttcttctctgctgttggaaaggtgcgggacgtaaggatgatc
tctgacaggaactctcgcaggtcaaagggcatcgcctacatcgagtttgtggaggccagt
tcagtgcctctggccattggcctgacggggcaaaggctgctgggtgttcccatcatcgta
caggcctcccaggcagagaaaaaccgagctgctgctgctgcggctgcagccaacaacctt
cagaaggcgacgtttggacccatgaggctctacgtcggctctctgcactttaacatcact
gaggagatgttgcgagggatctttgaaccatttgggcggatcgaacacatccagctgata
atggacagtgaaacggggcgatctaaaggctacggcttcataacatttgcagatgcagag
tgtgctaagaaagctctggagcagctgaacggctttgagctggcaggacggcccatgaag
ttgggtcacgtgagcgagcggaccgacatatccacggcttcatcattcctggacaacgat
gagctagaccgatcaggggtggagctgggaaccacagggagactgcagctaatggcgcgg
ctggctgaaggtacaggaatgcagatccctcctgctgctcagcaagctctacagatgagc
ggagcgattgctattggagctctggctgctgtgtcagctgccatgaatccaaccctcaac
atgaacatgaacactccagccctgaatcttccatctcaaccactcgctactcactgcttc
cagctgtccaacatgttcaaccccaacagtgagaacgctccaggctgggagctcgacatc
cagcacgacgtcatcgaagagtgcaacaaacacggaggggttgtccacatctacgtcgac
aagaactcatctgagggaaacgtttatgtgaagtgtccctccatcccgtctgccatggct
gctgttaacgccctgcatgggaggtactttggaggtaaaataatcacggcggcgtatgta
cccctgcccacttaccacaacctgttcccagagtcggtcactgccacccagctgctggtt
ccacctccgagacggtga
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