Cyprinodon tularosa (White Sands pupfish): 119794385
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Entry
119794385 CDS
T07496
Symbol
lsm4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03018
RNA degradation
ctul03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119794385 (lsm4)
09123 Folding, sorting and degradation
03018 RNA degradation
119794385 (lsm4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctul03019
]
119794385 (lsm4)
03041 Spliceosome [BR:
ctul03041
]
119794385 (lsm4)
Messenger RNA biogenesis [BR:
ctul03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119794385 (lsm4)
mRNA degradation factors
5'-3' decay
Lsm complex
119794385 (lsm4)
Spliceosome [BR:
ctul03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
119794385 (lsm4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
119794385
NCBI-ProteinID:
XP_038157848
LinkDB
All DBs
Position
Unknown
AA seq
143 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVMSKGRGRGGSQQNKQQGKGRGGPGRGVFGGRGRGMSG
PGRGQQQPSDKKPGKPQGMKNQH
NT seq
432 nt
NT seq
+upstream
nt +downstream
nt
atgcttccgttgtctctgttgaaaactgctcagaatcatcccatgttggtagagcttaag
aatggggaaacctacaacggtcacctggtgagctgtgacaactggatgaatataaacctg
agagaagtcatctgcacgtccagggatggagacaagttctggaggatgcctgagtgctac
atcagaggcagcactatcaagtacctccgaatccctgatgagatcatcgatatggtgaag
gaggaggtgatgtcaaaggggcgcgggcgtggagggtcccagcagaataaacagcagggc
aaaggaagaggaggacctggccgaggtgtgtttggaggccgtggcagagggatgtctggg
cctggacggggtcaacagcagccatctgataagaaaccaggaaaaccacagggaatgaag
aaccaacactga
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integrated database retrieval system
