Cyprinodon tularosa (White Sands pupfish): 119794587
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Entry
119794587 CDS
T07496
Symbol
gabra6b
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04080
Neuroactive ligand-receptor interaction
ctul04082
Neuroactive ligand signaling
ctul04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119794587 (gabra6b)
04082 Neuroactive ligand signaling
119794587 (gabra6b)
04519 Cadherin signaling
119794587 (gabra6b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ctul04040
]
119794587 (gabra6b)
Ion channels [BR:
ctul04040
]
Ligand-gated channels
GABA-A
119794587 (gabra6b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
119794587
NCBI-ProteinID:
XP_038158126
LinkDB
All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MSIGSLRGMAFIWTSLFLFCARSVCETQHSDTSIYLDNITRILDRLLDGYDNRLRPGFGG
PVTEVKTDIFVTSFGPVSDVEMEYTMDVFFRQTWIDERLKFEGPIEILRLNNLMVSKIWT
PDTFFRNGKRSISHNMTTPNKLFRIMQNGTILYTMRLTINAECPMRLMNFPMDGHACPLK
FGSYAYPMSEIVYTWKKGPLSSVEVPQESSSLLQYDLIGQTVSSERLISNTGEYVIMTVH
FHLQRKMGFFLIQTYIPCIMTVILAQVSFWINKESVPARTVFGITTVLTMTTLSISARHS
LPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFSTLQANRELRKAAAIKAAAQEAAAAA
VAPAGSTGNEGDISSVSQVDASSVLKKRMNSAPVFERPAKTFPNPPVNAQAFLQQGSAVP
ANNVLTGTSIIDKYSRILFPLSFGAFNLVYWIVYLTKDTMEMSRDTV
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcgggtctttgcgaggcatggctttcatttggacgagcttatttctgttttgc
gcgagaagtgtttgtgagactcagcacagcgataccagtatctatttggataatatcacg
cgtatattggatagattactggatggttatgacaacaggctgcgacctggatttggaggt
cctgtcacagaggtcaaaactgacatatttgtcaccagctttggacctgtttcagatgta
gagatggagtacaccatggatgtgttctttcgtcagacatggattgatgaacggctaaaa
tttgaaggcccgattgagatcctgcggctaaacaaccttatggtcagcaaaatctggact
cctgacacatttttccggaatggcaagaggtcaatctctcacaacatgaccactccgaac
aagctgttccgcatcatgcaaaacggaactatcctctacaccatgagattaactataaat
gcagaatgccccatgcgtctcatgaacttcccgatggatggccatgcttgcccactcaaa
tttgggagctatgcttaccccatgagtgagattgtgtacacatggaagaaaggacctctg
tcttctgttgaagttccacaggaatcatctagcttgttgcaatatgaccttattggtcag
acagtatcaagcgaaaggctgatatctaacacaggtgaatatgtcataatgactgtccac
ttccatcttcaaaggaaaatgggtttcttcctgattcagacctacattccctgcataatg
actgtcattctggcgcaagtttccttctggatcaataaggaatctgttccagctaggacc
gtgttcggtatcaccactgtcctgaccatgacaactttaagtatcagtgcacgacactcc
ctcccaaaagtctcctatgccacagcaatggattggttcatagctgtttgctttgcattt
gtcttctctgccctcattgagtttgcggctgtcaactacttttcaacactccaggcaaac
agagagctgaggaaggcagcagccattaaggcagcagctcaagaggctgcagctgcagct
gtggctccagcaggaagcacagggaatgagggagacatttcatcagtaagtcaggtggat
gccagtagtgtattgaagaagaggatgaactctgcaccagtttttgagcgccctgcaaaa
acgttcccaaaccctcctgtgaatgcccaagcttttctacagcaaggctcagcagtaccg
gccaacaatgttctgacaggcaccagcatcattgacaaatactctcgcatcctctttccc
ctttcgtttggcgcctttaacttggtctactggatagtctatctcaccaaggacacaatg
gagatgtcaagggacactgtctaa
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