Cyprinodon tularosa (White Sands pupfish): 119794742
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Entry
119794742 CDS
T07496
Symbol
lmo7a
Name
(RefSeq) LIM domain only protein 7 isoform X1
KO
K06084
F-box protein 20
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04517
IgSF CAM signaling
ctul04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
119794742 (lmo7a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
119794742 (lmo7a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ctul04121
]
119794742 (lmo7a)
Ubiquitin system [BR:
ctul04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
119794742 (lmo7a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
CH
LIM
PDZ
PDZ_6
PDZ_4
PDZ_2
Motif
Other DBs
NCBI-GeneID:
119794742
NCBI-ProteinID:
XP_038158354
LinkDB
All DBs
Position
Unknown
AA seq
1444 aa
AA seq
DB search
MEWRQQSSVSSEEAYLEAQRWMEAVTKKKFGNGDFRSALENGVLLCDLINKIKPGIIKRV
NRLPTPIAGLDNLNVFLKACGKLGLKEAQLFHPGDLQDLSTRVTVKHQETNRRLKNVLIT
IYWLGRRAQSDRFYDGPYLNFKAFEGLLGTALYKALQESNNPKGSNVRDSGFGDSWYSER
EEIYSLREGGGGGKHRRDDSFDSLDSLGSRPHSVSSDANLKGSSEGCSSDTEADSSFRMA
DKNSLSYRRSLVITPKVTAQFNQFLPTKDKQSGYVPAPLRKKRAERNEDSRRSWASSSFG
DDEGTLTRQQQTPESSEGSKSTSDIQVDPSVTRQNRLEELQKYREQIKDSEDKWQDDLNK
WKNRRRSVNSDIVKKKEEREKIEQITYGGEKRSKTFKEMQEERDNKGKSSIGSRLSSLSH
LDDDEDVFDRPAVRTPTRTLAARSYTIDTPSYSSESYKPSVKTEEPPAASPPTRRSPSPP
SSPETVDSPAVRNSITSSTITPANHSSHSQPAAPLQKSPAETSAGGTSREKAARDGAPAS
STSTQKEPESRPSLLGAKTEVAVPSFSSINRQRPQFSSMEPNPPGGSRVSASLPRSYQRS
DSARLSSVVAPRPFGTQSSRISSLSRAFTTDDSHKGVNGNVDLSKKASVPGRYHQYMNSG
DEDQSSSSPTSDEEEEEEEEKDTTVKGLSSTQSIKADLPPVKSEVPVSPTPKKETSKEAF
CEMRISLNQKPNSSRDFGFQAAWDSTGARVTSIQPGSSAEMCQLQVGDEVLKVNGLPVAQ
MSYDQWKSSLHEALQKGSLVMDVRRHGQNNWDRDQPSLPFKSHKTVNLTSTDHPILLGSP
EIKTVSSSLDFTSRTVTETVLAKEPPTLPLVDVASDKVNGDFHHEPVTMRNKESEPISLK
NFKRRSEFFEQGDSESSVSALAFLCGGSESSVPDIPVPPITPTSSSRWSWDPEEERKRQE
KWQKEQERLLQEKYKRDQEKLQEEWLKAQQEIVTSGGDQQQPRSLQVNHGVSPQSPPSSV
QQPTPTLWEEEEKQRKMEQERQRQAAERRRREIQEEEEERKRREEREEELRMQRMKDEEL
RRKGEAREQERRQLEAAEQQRRQKAFEQQRWAAVSHDFDSAQPSLSFTDRAKSQSSPQLD
EDDKPQRRGVLLQPEGTSLRLLEDLKILRAKETQRQRTASLMEKINNFRAMRYGEAERDA
VTGSGASEEKKSQQSLSQAELERQQILNEMKKKTPLLTDNSWIRQRAASTAINRESEVPP
MRRGESLDNLDSYNTRHSSWTARSNSFAPNYSRPYSGYSGNSSFYSGVSGGRRAVSSTLP
SSYSTDSLRGGAGTHPAPWSRTPLSPSTPSPTVSPDLTSEAYQQRNRSVSGRKICTFCDT
PLGKGAAMIIESLGLCYHLNCFKCIDCKSDLGGTEAGAEVRIRNKQLYCNTCYMRFKTGQ
PSAM
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atggagtggcgtcagcagtcatctgtcagcagcgaggaagcttatttagaggcgcagaga
tggatggaggctgtaactaagaaaaaatttgggaacggcgacttccgatcagccctggag
aacggagttctgctgtgtgatctgataaacaagatcaaacctggcatcatcaaaagggtc
aacaggctcccaacccccatcgcaggtctggacaaccttaacgtcttcctgaaggcctgt
gggaagctcggactaaaggaggcacagctctttcaccctggggatcttcaagacttgtct
acaagagtgacagtaaagcatcaggagacaaacaggaggctgaaaaatgttttaatcacc
atctactggctgggtagaagagctcagagtgatcgtttctatgatggaccttacctaaat
ttcaaagcctttgagggattgttgggcacagcgttatacaaggctctgcaggaatcaaac
aacccgaagggctccaacgttagagacagtggctttggagacagttggtactcggagcga
gaggaaatctactccctgagagaaggtggaggaggaggtaaacacaggagggacgactcg
tttgatagtttggactcgttgggctccagaccccacagcgtttcatctgacgccaatctt
aaaggcagcagcgaaggttgtagcagcgacaccgaggcagactccagcttcaggatggct
gacaagaacagcctcagctaccgcaggtcgctagtcatcacacccaaagtcaccgcccag
tttaaccagttcctacctaccaaagacaagcagtcaggttatgtgccggctccactgagg
aagaagagggctgagcgcaacgaggacagccgacgcagctgggccagctccagctttgga
gatgatgaaggaacgctcaccagacagcagcaaacaccagagagttctgaggggagcaaa
tcaacaagcgacatccaggtggacccctcagtcacccggcagaaccgcctcgaagagctc
cagaagtaccgtgagcagataaaagacagcgaggataagtggcaggatgacctgaacaaa
tggaaaaaccggcgccggagtgtgaactctgatatagtgaaaaagaaggaggagcgggag
aagatagagcagatcacgtacggcggcgagaaaaggtccaagaccttcaaggagatgcaa
gaggagagggataataaaggaaaaagcagcataggcagccgtttgtcatctctctctcac
ttggatgacgacgaggacgtatttgacagacctgctgttcgcacgcctacccgaacactt
gcagccagaagctacaccatcgacactccatcatattcctctgagtcctacaagccctct
gtgaaaactgaggagccccccgctgcttccccacccactcgtagatcaccttcacctccc
tcttcgccagaaactgtggacagtcctgcagtcagaaactccatcaccagctccaccatc
actcctgccaaccacagctcccactctcaaccagctgctccactacagaagagtccagca
gaaacaagcgcaggtggaacaagcagagagaaggctgcgagggacggcgcccccgcctcc
tccacctccacacagaaggagcctgaatcgaggccctcattgttgggagcgaaaactgag
gtggcggtcccctcttttagttcaatcaacaggcaacgaccacagttcagctcaatggaa
cccaaccctccaggggggtctcgagtttccgcctctctccccaggagctaccaaagatcg
gatagcgcaaggctaagctcagttgttgctccgaggccctttgggacccagtcctcacgc
atctcctctctttccagagcctttacaacggacgactctcacaagggcgtcaacggcaat
gttgatctttctaaaaaggcgtcagtccccggccgctatcatcagtacatgaactcaggg
gatgaggatcagtccagctcttcacccaccagtgatgaggaggaagaggaggaggaagag
aaggataccacagtgaaaggcctgtcctctactcagagcatcaaagctgatctgcctccc
gttaagagtgaagtcccagtcagtcctactccaaagaaagaaactagcaaggaggccttc
tgcgagatgcgaatcagcctgaaccagaagcccaacagcagccgggactttggttttcag
gctgcctgggactcaacaggagctcgggtcacctccatccaaccaggtagctcagctgag
atgtgccagctgcaggtcggagatgaagtgctgaaggtaaacgggctcccagtggcacag
atgagttatgaccagtggaagtccagcttgcatgaggccctgcagaagggcagtctggtc
atggatgtgcgccgtcacggccagaacaactgggacagagatcaaccttccctgccattt
aaaagccataagaccgtcaatctgaccagtacggatcatccgatacttctaggttcccct
gagataaagactgtcagttccagcctggattttacttcacgtacagtcacagaaacggtg
ctggctaaagaaccgcccactcttcctcttgtggacgtggcttcagacaaagttaatggg
gacttccatcatgaaccagtgaccatgaggaacaaagagtcagaaccaatatctttgaaa
aactttaaacggaggtcagagttttttgaacaaggagactcagagtctagtgtcagtgcg
ctggccttcctctgtggaggatcagagtcttccgtcccagatatccctgttcctccgatc
actccaacctcctctagccgctggtcgtgggaccctgaagaggagcgcaagagacaagag
aaatggcaaaaggagcaagagcgcctcttacaggaaaaatataagcgtgatcaggagaag
ctgcaggaggagtggctgaaggcccagcaggagattgtgacaagcggaggcgaccaacag
cagcctaggagtctccaggtgaaccacggtgtgagtccacaatcgcccccatcttctgtc
cagcagcccacacctactctgtgggaggaggaagagaagcagaggaagatggagcaggag
cgacagcggcaggcagcggagaggagaaggagggaaattcaggaggaggaggaggagcgg
aaaagaagggaagagagggaggaggagttgagaatgcagaggatgaaagatgaagagctg
aggaggaaaggggaggccagggagcaggagagaaggcagctggaggcggcagagcagcag
cgcaggcagaaagcctttgagcagcagaggtgggctgctgtctcccacgactttgacagt
gctcagccttcgctgtccttcactgacagggcaaaatctcagtcgtccccccagcttgat
gaggacgacaagcctcagaggagaggtgttttattgcagccagagggcacgtctctcagg
ttgctggaagatttgaagattttacgtgccaaagaaacccaaaggcagaggactgcatca
ttgatggaaaagataaacaacttcagagccatgagatacggagaggcagaaagagatgcg
gtgacaggaagcggagcttctgaggagaagaagagtcaacagtctctatcccaggctgag
ttggagcggcagcagatcctcaatgagatgaagaagaagaccccgctcttaacggacaac
agttggatccgtcagcgcgccgccagcacggccatcaacagggagagcgaggtgccaccc
atgcgcagaggggaatctcttgacaacttggactcctacaatactcggcactcgtcatgg
accgccaggagcaactcttttgctccaaactactctcggccttattctggctactctgga
aactcttctttttattccggagtgtcggggggccgtcgggccgtttcctccactctaccc
tcctcctactctactgactccctccgaggtggggcaggaacgcacccagcaccttggtcc
cgtacacccctctccccttctactccatcgccaaccgtctctccagacctcacatctgag
gcttatcagcagcggaacaggtcagtgagtggcaggaaaatctgcacgttctgcgacacc
ccgctgggaaagggagcagccatgatcatcgagtcccttgggctctgttatcatttgaac
tgttttaagtgcatcgactgtaaatcagacctcggtggaactgaggccggagctgaagtc
agaatacgaaacaaacagctctactgtaacacttgctacatgcgattcaaaaccggccag
ccatcagctatgtga
DBGET
integrated database retrieval system
