| Entry |
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| Symbol |
bard1
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| Name |
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
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| KO |
| K10683 | BRCA1-associated RING domain protein 1 |
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| Organism |
ctul Cyprinodon tularosa (White Sands pupfish)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:ctul00001]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119794881 (bard1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:ctul03019]
119794881 (bard1)
04121 Ubiquitin system [BR:ctul04121]
119794881 (bard1)
03036 Chromosome and associated proteins [BR:ctul03036]
119794881 (bard1)
03400 DNA repair and recombination proteins [BR:ctul03400]
119794881 (bard1)
Messenger RNA biogenesis [BR:ctul03019]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
119794881 (bard1)
Ubiquitin system [BR:ctul04121]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
119794881 (bard1)
Chromosome and associated proteins [BR:ctul03036]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
119794881 (bard1)
DNA repair and recombination proteins [BR:ctul03400]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
119794881 (bard1)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
Unknown
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| AA seq |
815 aa
MHHLSKLDKESKSSREISLVKMDNNAPLEEDSWKRTKEAVASFRQLLLCSKCSNLMEEPV
CLGICEHMLCRSCAGPRAGDGCAVCRSPAWVKDIQINRQLSSIIQLFSGLDSLLNPTELP
AESSCVEVKSQAEAVVLKQKKNFKIWFSPRSRKVRCKVEKPLEVPIPDNSSSGEQPAAQC
QDLSVFNFASSSQDSSSSQCENNVNRKGRKRSKKVATKKQVQGRTSTTRKQNKESMKRKR
LETINRQWGITEDQNPSSGLEPFCADGARRSSKRVSFLSPTVANDKPHPEVSQIDELSLT
NHTMKEGFSGGGVNVLSNQSQHELSISSEMVSTNDPNPNNNSSKNKSISPQENTSKRNKT
EEVNRTLDTTPKRPRASPGQRRKTPDRPSLPFTECLTLTSPMRERSKKHLRADEQRSPSV
VALRSAESHNKSLCSPRSSGSRSSPGSPAVMKRNHKGETPLHLAAIKGDVDSVEELLDQG
ADPNLKDNAGWTPLHEACNLGHLAAVEVLVSRGALLNTPGYENDSPLHDAVRNGHAAIVQ
LLLQLGASQNVLNLHGKRPADYAVSQEMLQIFQEAAEETQDAKSHTAQSPSATVSASNES
IRRDQTLLLLASKLSQPEQHQLASLGVLLGGRIADTFSSSVSHVVVPEGQMPTTYSTLLG
LLAGCWVVKYSWVEACLQAGKWLPEAEHEAGEGSRRSRINRCSLLPPLFDGCFFFLHGSF
KGLTKDELAKLLREGGGQLLSRQPKPDSDVTQTLNAAAYHAEPGSDQALCTQYIIYDPQG
NYKPAVVRRGKVWSAPSTWIIDCISSFSLLPVPQP |
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| NT seq |
2448 nt +upstreamnt +downstreamnt
atgcaccatttaagcaaactagataaagaaagcaaatcttccagggaaatatctcttgtg
aagatggataacaacgcaccgctagaggaagacagctggaagaggactaaagaggcggtg
gcaagcttccgtcaactgctgctttgctccaaatgctcaaatttgatggaggagccggtc
tgtctggggatatgtgagcatatgctgtgcaggtcttgtgctggcccccgggcaggagat
ggctgcgctgtgtgtcgcagccctgcgtgggtgaaggacatccaaatcaacaggcagctt
agcagcatcatacagctgtttagtggcttggactccctgcttaatcccactgaacttcca
gcagaatcatcttgtgttgaggtcaaatcacaggctgaggctgttgtcctaaagcagaaa
aagaactttaagatctggttcagtccccgcagtcgaaaggtgcgctgtaaggtagagaag
cctttagaggtcccgatcccagacaatagctcctccggagagcagcctgcagctcagtgc
caggacctttctgtgtttaattttgcttcatcctcccaagactcttcatcttcacaatgt
gaaaataatgtaaacagaaaaggaaggaagagatccaagaaagttgctactaaaaagcag
gttcaaggtcgcacaagtaccacacgtaaacagaacaaagagagcatgaaaaggaagagg
ctggagaccattaaccggcaatggggaattacagaggatcaaaatccttcatctggactg
gagccattttgtgctgatggggcaagaaggtccagtaaaagggtttctttcttaagccct
actgttgccaatgacaagcctcatcccgaagtatcgcagattgatgaactcagtttgacc
aaccatacgatgaaagagggtttctcaggaggaggggtgaatgtgctcagtaaccaaagc
cagcatgagctgagcatatccagtgagatggtgtccacaaatgaccccaatccgaataac
aattcttctaaaaacaaaagcatctctccccaagagaacacctccaaaagaaacaaaacc
gaggaggtaaaccggaccttggataccacaccaaaacgaccgagggcttctccagggcaa
aggaggaaaacaccagatagaccatctttgcctttcacagagtgtttaactttaacaagc
cccatgagggaaaggagcaagaaacacctgagagcagatgagcaacgtagtccctctgtg
gtagcacttagatctgcagaaagccacaacaaatccttatgcagtcctcgatcatctggc
agccgttcaagtcctggaagtcctgcagtaatgaagaggaaccacaagggagagacccct
ctgcatcttgcagccataaagggagatgtagattctgtcgaagaactgttggaccaggga
gcagaccccaacctgaaagataatgctggctggactcctttgcatgaggcgtgtaatctg
ggccacctggcagctgtggaggttttggtctctagaggagccctgttgaacacccctggc
tatgaaaatgattctccactccatgatgctgtgaggaacggacatgcagccattgttcag
ctgctgctgcagcttggtgcctcgcagaatgttcttaatctgcatggaaagcggcctgca
gattatgcggtgagccaggagatgctgcagattttccaggaagctgcagaagaaacccaa
gatgctaagtcacatacagctcaaagcccatcagccactgtctctgcgtcgaatgagagt
ataagaagggatcagaccttactgctattggccagcaagttgtcgcaaccagagcaacat
cagctggccagcctgggagtcctactgggaggaaggatcgctgataccttctctagctca
gtgagccatgtcgttgtgccagaaggacaaatgcccaccacctactcaaccctcctgggt
cttcttgccggctgctgggttgtcaaatacagctgggtggaagcatgtctgcaggcgggg
aagtggctgcctgaagcagagcacgaagcaggagaaggctctcgtcgcagtcgcatcaat
agatgtagtttgctccctccactcttcgacggctgtttcttcttcctccacggctccttc
aaggggctgaccaaagatgagctggccaagctgttgcgcgaaggaggcggacaacttctg
agccgacagccgaagccagacagtgacgtgacacagacactgaatgcagcagcctaccat
gccgagccaggctctgaccaggccctttgcacccagtacatcatctacgacccacaggga
aactacaagccagcagttgtcaggcgagggaaggtgtggtcggctccttctacctggatc
atcgactgcatctcatccttcagccttctccctgtacctcagccttaa |
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