Cyprinodon tularosa (White Sands pupfish): 119794902
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Entry
119794902 CDS
T07496
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctul03019
]
119794902
Messenger RNA biogenesis [BR:
ctul03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
119794902
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_4
zf-CCCH_2
Omega-toxin
Motif
Other DBs
NCBI-GeneID:
119794902
NCBI-ProteinID:
XP_038158595
LinkDB
All DBs
Position
Unknown
AA seq
893 aa
AA seq
DB search
MGLRDHLDDGTGHMLSLGLDLDYLSVDGAKKQTQNNLKASEILQVRGAAQSSSSYNSDGS
TNSTNLSYSSSCSTFSEESALSDNDEEQHQTGFDSGPEISNQDPLHFHQNSSLQCKQVRL
DLAPNLSTGEPPQSDALAPDEFISDCRTKVDFALKLGYSEELVLLVLRKLGPDALINDIL
GELVKLGTKTEMEQQKGLTASHSSSSSLSSLTSNSSLESCQLQSPSPLLEDKHNFRPVVI
DGSNVAMSHGNKEVFSCQGIQLAVEWFLERGHRDITVFVPAWRKEQSRPDALITDQEILR
RLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAYESDGIIVSNDNYRDLANEKPEWKKFI
DERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKKPVAEPRKQPCPYGKKCTYGHKCKFY
HPERGCQPQRSVADELRASARVSSVASRGLLEHALMGKSQSSSQPEEIPEAESGHDSKLT
KQRLQSLPSSLMEDKLQMYSKPEGFKERSIIGGHTSFGVSRSSGHLDRWAQPEESSGAYG
SNLVKSFNRCSSPEVDCRSLVKAYSGLQLVVPQTPKTVLPAALQANSLPSDCSSDGNISS
DSFSPDPMSDNSPKCQHHVPHYHHHYGGLYGHTAGQVSSEMCQHSPYGYSGKQRSQRTQG
SVSEEHPCLVSSQASPCHRKTASANMLRQHQHPQLSSYQGEQPHHVPQTSTGQPDSQHSP
IHPNVLTSWKGELDDSAIYKGSPLSSRKNYSRLSQHPQLKTHCDFDHEPSTWPSYDLFSY
RSFPPLYGKVWQYSWEQQPLSSTHGFSNSSVPTPPQQSFRPISTHKAPLVNERHFSGHLS
SGQYQDLRERVFVNLCAIFPPDLVRKVMTKNPHVMDAQELAASILMEKLQHVS
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgggcctaagggaccatctggacgatggaactggccacatgctcagcctggggctggat
ctggactatctcagtgtcgatggtgctaagaagcagacccaaaataatctgaaggcttct
gaaatcctccaggtcagaggtgctgcccaaagcagcagcagttacaatagtgatgggagc
acaaatagtacaaatttgagttacagcagcagttgcagtactttttctgaggagagtgct
ctttccgacaacgatgaagaacagcatcagacaggcttcgattctggacctgaaatctcc
aaccaagatccgcttcactttcaccaaaactcctccttacaatgtaaacaggtcaggctg
gacctggcaccaaacctttccacaggagaaccaccacagtcggacgcattagctcctgat
gagttcatttcagactgtcgcaccaaggtcgactttgctcttaagcttggctactcagaa
gagctggtgctgttagtcctaaggaaactgggaccagacgcacttattaatgacatccta
ggagagctggtcaaactgggaaccaagacagagatggaacaacagaaaggtctaacagcg
tcccattcttcatcctcctctttgtcctccctaacgtctaactcttccctggagtcttgt
cagctccagtccccatccccactgctggaagacaagcacaactttcgacctgttgtcata
gatggcagcaatgtagcaatgagtcatggaaataaagaagtgttctcctgccaagggatt
cagctggctgttgagtggttcttggaacgaggtcaccgtgacatcacagtttttgtcccg
gcatggagaaaggagcagtcacgacctgatgcccttatcactgatcaagagatcctgagg
cgactagagaaggaaaagatactagttttcactccatctcggcgtgtgcagggacggcgt
gtggtttgttatgatgaccgattcattgtcaaactggcctacgaatcagatggcataatt
gtttccaatgacaactaccgagacttagccaatgaaaagccagagtggaagaagtttatt
gatgagcgcctgctgatgtactcctttgtcaatgacaaattcatgcctccagatgatcca
cttggacgccatggaccaagcctggaaaatttcctgaggaagaagcctgttgccgaacca
aggaagcaaccctgtccttatgggaagaaatgcacatacggccacaagtgtaaattctac
cacccagaaagaggttgtcagccccagcggtcagtggctgacgagctccgtgccagtgcc
agagtttcatcggtagcttccagaggcctgctggagcatgccctgatggggaagagccaa
agtagcagtcaacctgaagagatccctgaagctgaatcaggacatgacagtaaattaaca
aagcagagacttcagagtttgccctccagtctcatggaagacaaactccaaatgtattcc
aaaccagaagggtttaaagaaagaagcattattggaggacatacttcatttggggtgtcc
cgttcgtcaggacatctagacaggtgggcgcaaccagaggaaagtagtggagcatacggt
tcaaatttggtcaaaagtttcaacagatgcagttctccagaagtggactgcaggtctctg
gtgaaggcctattcaggtctccaacttgttgtgccacagacccccaaaactgtcttacca
gctgctctgcaagcaaattcactgccatctgattgtagcagtgatggcaacattagctct
gattctttttcccctgacccgatgtcagacaacagccccaaatgtcagcatcacgtccca
cactaccatcatcactatggtggattatatggacacacagcaggccaggtttcgtctgaa
atgtgccagcattccccatatggttattctggtaaacaaaggtcacaaagaacgcaaggg
tctgtcagtgaggaacacccttgtttggtcagttctcaagcatctccatgccaccgcaag
actgcatcagcaaacatgctaagacagcatcaacatccacagctaagcagctatcaaggg
gaacaaccgcatcatgtacctcaaacatctactggtcaacctgattcccaacactcaccc
atccatccaaatgtgttgacttcatggaaaggtgagcttgatgactccgcaatatacaaa
ggatcaccacttagttctagaaagaactactcaaggttatcccaacaccctcagcttaag
acacactgtgattttgaccatgagccatcgacgtggccttcctatgatctgttttcctac
aggagtttccccccactttatggtaaggtttggcaatactcttgggagcagcaacccctg
tcttccacccatggattttcaaattctagtgtcccaacacccccacagcagtccttcaga
cccatcagtactcacaaggcccctctggtgaatgagcgccacttctcagggcatctctct
tcaggtcaataccaggacctcagggagagggtttttgtcaacttatgtgccatcttccct
ccagatctggtgaggaaggtaatgaccaaaaacccccatgtgatggatgcacaggagctt
gcagcatcaattttgatggagaaattgcaacacgtgtcttaa
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