Cyprinodon tularosa (White Sands pupfish): 119795145
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Entry
119795145 CDS
T07496
Symbol
chd9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ctul03036
]
119795145 (chd9)
Chromosome and associated proteins [BR:
ctul03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
119795145 (chd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
119795145
NCBI-ProteinID:
XP_038158912
LinkDB
All DBs
Position
Unknown
AA seq
2995 aa
AA seq
DB search
MDFFDDPNLFVGGLEGLDEDGFHSAPSLVDELNLSAGFEPLQVEALGPGKHQELMTPVSS
QQAVPSYNQSMVHYTSIKAQNPLGQVFSSSQNTGCDIGTQQHGQYHNATISQVAQPNGLF
CSTGSPMWGNQDQNGNVFHHMSQHQQLCHQPLHNQQLHGRQHTQQQHHSGHQRVEQQQRM
QPLQQHSHQQQLLNQHQQITTASSCLQQQQHHSFSFHQGGQASSQQQMHHCQHQAPARES
QFHSRTLPDKPYLDCQNTSLSATCLQPRQQQGNYQLVRGGPAFSGTDSRLSFPIHPSSAV
HSMPTCSVSSAHAYQAAEFPAYPGEPEIPSLSQQSPCRPITTAPITTTVPRLPGTACQFQ
STAHVSQLQSGTAVNQADECPFRALRCSGETQTVCKSEMFEESVSCYPGMMNHLPSEQHM
SCGVININGYQAFGDNILPSEAQDGDLEDLDPPDLLPDLLPQLEDAFRQQDESSCSWLES
GQQNGHENGKPPATECKDEKPRKNPNGSSCQVRVLSPTVKSSPSSSSSSSSSSSSSSSSS
SSSSEKRVPRRKHHQMESTVHEKQEKANRIISEAIAKARQRGEKNIPRVMSPESFPSSSA
QFKTHREREHKGNGKARTKEKASRKACIVPSSKPKQKTKIGKIVIKIGKRKKRKPESSEE
ESDDDPPLCYASKDDDSKRRSNRQVKRKKYAEELEARLSDEDVKVIVKAKKTNTAASKEP
AVQLFVENPTEEDAAVVDKIMSSRIVKKEVSPGVMVEVEEFFVKYKNYSYLHCEWATEQQ
LEKDKRIQQKIKRFKMKQAQRALFFTDMDEEPFNPDYVEVDRVLEVSYCEDKDTGEEVVY
YLVKWCSLPYEDSTWELKDDVDQSKIEEFERLQAAKPDSRRVERPPANLWKKREQSREYR
NSNTLRDYQLEGVNWLLFNWYNRRNCILADEMGLGKTIQSITFLEEIHRIGIKGPFLIIA
PLSTIANWEREFHTWTHLNVIVYHGSMISRQMLQQYEMYFRDAQGRPIRGAYKFQAVITT
FEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGFKLMNLEHKVLLTGTPLQNTVEE
LFSLLHFLEPGRFPSENNFMQEFGDLKTEEQVQKLQGILKPMMLRRLKEDVEKKLAPKEE
TIIEVELTNIQKKYYRAILEKNFSFLAKGAGQSNMPNLVNTMMELRKCCNHPYLIKGAEE
KILEDFREVHSPTAADFHLQAMVQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILE
DYLIQKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCII
FDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMS
GRDNSLGGGTGGGAAQQQLSKKEIEDLLRRGAYGAIMDEEDEGAKFCEEDIDQILQRRTK
TITIESEGRGSTFAKASFVASGNRTDISLDDPNFWDKWAKKADIDMDMVNGRNSLVIDTP
RVRKQTRPFSATKDELAELSEGESDSDETKPKLRRNDRPNSYGRTECFRVEKNLLVYGWG
RWKDILNHGRFKKQLTERDVESICRALLAYCLVHYRGDDKIKSFMWDLIAPTEDGRTKEL
QNHLGLSVPVPRGRKGKKMKTQTSSFDIHKAEWLRKHNPEHMLQDDGYKKHLKHHCNKVL
LRVRMLYYLKQEVIGSQAQKVLDGGDSSEVKIWVPDPDHSELPALWWDAVADKCLLLGVF
KHGYEKYNTIRADPTLCFLDRVGRPDEKAIAAEQRSNDFMDGDVDDPEYKPAPALLKDEM
EDDASSPGDLVVSDNAGDAPLLTEGQTAYWPSPSVLTARLRRLITASQRYTKSRQILHIH
QTQSHPQTQQAMMLSAPVCPLAPTLKDTLNPKMAAKIERQQRWTRREEADFYRVVSTFGV
VFDPNLGQFDWTKFRAMARLHKKTDESLQKYLCAFTAMCRRVCRLPPKDGDSAVDPSLTI
QPITEERASRTLYRVELLRQVREQVLRHPLLYERLSLCQMSSDLPVWWEAGTHDRDLLIG
AAKHGVSRTDYHILRDPDLCFMAAQRNYSQVKAAQQQQRTATPLLHTQYQAPSSLPPGSP
LPPPQHRDPDPCGLVPKVEPASEEEVKERQGEGWSPHQLPATPTGLEEKPVLGAKDSERQ
MVAARTKPLTPNSTEKKPKKASKRGRREARRGSESDSDRSSSSSSSRSSSSSSSSSSSSS
HSGSSSSSSSSSCSSGSSSSSSSSSSSDDSESEGEEAKKKVPVTASVKGFDEDSVASLST
TQDEMLDSHMSENGVANNSSHPFQGGGYMLAASYWPKDRVIINRLDSICQAVLKGKWPGH
RRVYEPGSTVASFYTTKLLDNANSLCEDPSASPQGSKVTKHVAENKEFSVKLNDQEGGLK
LTFQKQGLPVKRPLEAEEGPQAQQQYLARLHELQSASDTGLADITKPQSSFQTDVHSSHA
VSPSVIPGVSGQMRLNGAVDGQPMVKKRRGRRKNVEGMELLFMNKNKSPINPDPVAPGWG
GIGQVGIPGAAVPMNSSQIPADTDTRVPVINLKDGTRLAGDDAPMRKDLDQWLREHPGFV
ADTGAFIPGVNKMQMQFHFQDGRPKQKRHRCRNPNKIDVNSLTGEERVQIINRKNARKIG
GAFAPPLKDLCRFLQENPEYGVPPEWADVVKQSGYLPESMFDRILTGPIVPEEVSRRGRR
PKNPLAKAAAAAAMPSSAGSTLGLNPLLANGILSGMDLGSLQAFQQNLQSLQSLQLTAGL
MGLPPDASNLAASNLAAMFPMMLSGMAGLPNLLNMGGLLGKPTQEVAGGSEERAKGTDTS
GATDQSNAPPHSSETKGERTESSNVTPSSTSSSASSATVTQSASAASAATSHPLSLNPLL
LSSMLYPGMLLTPGLNLPVSATQPQSPNSDPSTLPPAAPSAPSASQSLPTEARQPSGKGE
EEGPEEALDEEEEDEESAEPRENSGPECSAKAESSSSESGSSSSSSDDSDSSDED
NT seq
8988 nt
NT seq
+upstream
nt +downstream
nt
atggacttctttgacgatcccaacctctttgttgggggtttggaagggctggatgaagat
ggattccattcagcaccttcgctcgtggatgagctcaaccttagtgctggtttcgaaccc
ctccaagtggaggcacttggtccagggaagcatcaagaattgatgacaccagtctcttcc
caacaagctgtgcccagttacaaccagtccatggttcattatactagcatcaaggcacag
aatccccttggtcaggtattttctagttcccagaatacaggttgcgacattggtactcag
caacatggccagtaccataatgccaccattagccaagtagctcaacccaatgggctgttt
tgcagcactgggagcccaatgtggggcaaccaagaccaaaatgggaatgtgtttcaccac
atgtctcagcatcaacaactttgtcatcagccactgcacaaccagcaacttcacggcaga
caacatactcaacagcagcaccattctggtcatcaacgggtggagcaacagcagagaatg
caacctctacagcagcacagtcatcagcagcagctgcttaaccagcaccaacaaattacc
acagcgagttcttgcctgcagcaacagcagcatcactctttctctttccaccagggaggt
caggctagcagccagcagcagatgcaccattgtcagcatcaagcacctgcaagagaatcc
cagttccattccaggactcttccagataaaccttatttggattgtcagaacacttctctg
agcgcgacttgcttgcaaccgcgtcaacagcaggggaactaccagttggtcaggggaggt
ccagccttctctggaacagactcccgcctgtcattccccatacatccatcgtctgcagtt
cactccatgcccacatgctctgtcagttcagctcatgcttaccaagcggctgagttccct
gcctatcctggagagccagaaatacccagtctcagtcagcagtctccatgtaggcccatc
actactgcaccaattactactacagtgcctaggctgcctggaactgcatgccagttccaa
tccacagcacatgtgagtcagctgcagtccggaacagcagtgaaccaagcagacgagtgt
cccttcagagccttacgctgttctggagaaacccagaccgtctgcaagtcagagatgttt
gaagagtcagtgagttgctatccaggcatgatgaaccacctgccctctgagcagcacatg
agctgcggggttattaacattaatgggtaccaagcttttggagacaatatcctgccatca
gaagcccaggatggagacttggaagacctggatcctcctgacctcctgcctgacctgctg
cctcagctggaggacgctttcaggcagcaggatgaatccagctgttcttggctggagtca
ggtcagcagaacggacatgagaacgggaaaccaccagctactgaatgcaaggatgagaag
cctcgaaaaaaccccaatggttccagttgtcaggtgcgggtcctcagccccacagtgaag
agcagcccttcatcctcctcctcctcttcgtcgtcttcttcctcatcttcatcctcctcc
agctcctcgtcggagaagagggtgccaaggaggaagcaccatcagatggagtcaactgtg
catgagaagcaggagaaggccaataggataatatcagaggcgatagccaaggcgcgacaa
agaggggagaagaacatcccacgggtcatgagcccggagagcttccccagctcctctgct
cagttcaagactcaccgtgagcgcgagcacaaaggaaatggcaaagcccggaccaaagag
aaggcctccaggaaggcctgcatcgtaccttcatcaaagcccaagcaaaagaccaagatt
gggaaaatagtaatcaagattggaaaaaggaaaaagcgaaagccagagtcttcagaggag
gagtctgatgatgatccccccctttgttacgcttctaaggatgacgactctaagaggcgg
tcgaatcgccaggtgaagaggaagaagtatgctgaggagctggaagccaggttgtcagat
gaggatgtcaaagtcatagtgaaggccaagaaaaccaacactgctgcatccaaggagcct
gctgttcagctctttgtggagaatccaacagaggaggatgctgctgttgtcgacaaaatc
atgtcttctcgtatcgtcaagaaggaggtctctccaggtgtgatggtagaagtggaggag
ttttttgtaaaatacaaaaactactcctaccttcactgtgaatgggccacagagcagcag
ctagaaaaggacaagaggattcagcagaagatcaaacgcttcaagatgaaacaagcacag
agggcgctcttcttcactgatatggatgaggaacctttcaaccctgactatgttgaagtc
gaccgagtgctggaggtatcgtactgcgaggacaaagacacaggcgaggaagtggtgtac
tacctggtgaagtggtgttctctgccttatgaggatagcacatgggagctgaaggacgac
gttgatcaaagcaagattgaagagtttgagcggctgcaggcagccaagccagactcacgc
agagtggagcgacctccagccaacctctggaagaagagggagcaatcgagggaatacagg
aatagcaacactctcagggattaccagctggagggggtcaactggcttcttttcaactgg
tacaacaggcggaactgtatcttggctgacgagatgggcctaggaaagaccatccagtcc
ataacattcctggaagagattcaccgtattggcatcaaagggcccttcctcatcatcgcc
cccctctctactattgcaaactgggagagagaatttcacacctggactcacctcaacgtc
atcgtttaccacggaagcatgattagcaggcagatgctgcagcagtatgagatgtatttc
agggatgcacagggtcgccccattcgaggtgcctacaagttccaggctgttatcaccacg
tttgagatgatcctgggaggctgccccgagctcaatgccatcgagtggcgatgtgtgatc
atcgacgaggcccatcgtctgaagaacaagaactgcaagctacttgaaggcttcaaactc
atgaacctggagcacaaggtcctattgactggaactcctctgcaaaacacagtggaggag
ctttttagtctgctgcacttcctggagccagggcgcttcccctctgagaacaacttcatg
caggagtttggtgacctcaagacagaggagcaggtgcagaagcttcagggcatcctgaag
cccatgatgctgcgtcgtttgaaagaagacgtggagaagaagctggcccctaaagaggaa
accatcattgaggtggagctcaccaacatccagaagaaatactatcgcgccatcctcgag
aagaacttctctttcctggctaaaggggcgggccagtcgaacatgcccaacctggtcaat
accatgatggaattaagaaagtgttgtaaccacccctacctcatcaaaggggctgaagag
aagatcctagaagatttcagggaagtgcacagtcccactgccgctgactttcaccttcag
gccatggttcagtctgctggaaagttggttcttattgataagctgctgcccaagatgaag
gcaggaggccacaaggtgctcatcttctcccagatggtgcgctgtctggatatcttggaa
gactacctcattcagaaaaggtacttgtatgagcgcattgatggccgcgttcgtggaaac
ctgcgtcaggctgccatagatcgcttcagtaagcccgactcggaccgcttcgttttcctg
ctgtgtacaagagccggtggcttgggcatcaacctgactgcagcagatacctgcatcatc
tttgactctgactggaaccctcagaacgacctgcaggctcaggctcgctgtcatcgaatc
ggtcagaacaaggcggtgaaggtgtatcgtctcatcaccaggaactcgtatgagcgagag
atgtttgaccgggccagcctcaagctgggcctggacaaagccgtgctgcagagcatgagt
ggccgtgataacagccttggaggaggcacaggaggaggggctgctcagcagcagttgtcc
aagaaagaaatcgaggatcttttgcgacgtggtgcctacggagccatcatggatgaggaa
gatgaaggggccaaattctgtgaggaagacattgatcagatcctccaacgcaggacaaag
accatcaccatcgagtctgagggacgaggatccacttttgctaaggcaagttttgtggca
tccgggaaccgcaccgacatctctctggatgatcctaatttctgggacaagtgggccaaa
aaagctgacatcgatatggatatggtcaacggcagaaacagcttggtgatcgacactcca
cgtgtgagaaagcagaccagaccgttcagcgccaccaaagatgagctggcagagctgtcg
gagggggagagtgacagcgatgagaccaagcctaagctcagaagaaacgaccgtcccaac
agttacggacgcacagagtgcttcagggtggaaaagaacttgcttgtttatggatggggt
cgttggaaagatatccttaaccacggtcgtttcaagaagcagttgaccgagcgggatgtg
gagtccatctgcagagccctgctcgcctactgcctggtccattaccgtggcgatgacaaa
ataaagagcttcatgtgggacctgatagctcccactgaagacgggcgcaccaaggagctg
cagaatcacctcggcctgtcagtcccagtacctcggggcagaaagggcaagaagatgaag
acccagactagttcttttgatatccacaaagctgagtggctccggaagcacaaccctgag
cacatgctgcaggacgacggctacaagaagcatctgaaacaccactgcaacaaggtgctg
ctccgggtcagaatgctctactacctgaaacaagaggtgatcggaagtcaggcccagaag
gtgctggacggcggcgactccagtgaggttaagatctgggtgccggacccggaccactcg
gagctcccggccctttggtgggatgcagtcgccgataaatgtcttctacttggagtcttc
aagcatggatatgagaagtacaacacaattcgagcagacccaactctgtgcttcttagac
cgcgttggtcggccggatgagaaggccatcgctgctgagcagaggagcaatgacttcatg
gatggggatgtggatgatccagagtataaacctgctccagcccttctgaaagatgagatg
gaggatgacgcctcctcccctggagatttggtggtctctgataatgctggagatgcacct
ctgttgacggaaggccagactgcttactggccctccccctcagtgctcacagccagactg
aggcgactgatcacagcctcccagcgctacacaaagagtcggcagatcctccacatccat
cagactcagtcccaccctcagacccagcaggccatgatgctctctgcccccgtctgccca
ctggcccccacacttaaagacacgcttaaccctaaaatggctgcaaagattgaacgccag
cagagatggaccaggagagaagaggctgatttctatcgggtcgtctccacctttggcgtc
gtttttgacccaaacctcgggcagtttgactggacaaagtttagggccatggctcggttg
cacaagaaaacagacgagagccttcagaaatacctctgcgccttcaccgccatgtgcagg
agggtgtgccgcctgccacccaaagatggagattcggcagtggatccttccctgaccatc
cagccaatcacagaggagcgagcatcccgtaccctgtacagagtagagctgcttcgacag
gtcagggaacaagtcctcagacacccgttactgtatgaacgcctgtccctgtgccagatg
agctctgatcttcctgtgtggtgggaggctgggactcacgaccgtgacctgctgattggt
gctgcaaagcacggcgtcagtcggacggattatcacattcttagagaccccgatctctgc
ttcatggcagcccaacgcaactacagccaggtgaaggctgcccagcagcagcagcgcaca
gcgaccccgctgctgcatacccagtatcaggctcccagctccttaccgccaggttcccca
ctgcctccacctcaacacagagaccctgatccctgcggacttgttccaaaagtggaacca
gcctcggaggaggaggtaaaagaaaggcagggggagggatggagtccccatcagctgcca
gcgactcccactggcctggaggaaaagccggttttaggggcgaaggacagcgagaggcaa
atggtggcggcgcgaaccaaaccgctaacgcccaactccacagaaaagaaacccaagaag
gcgagcaagaggggccgcagggaggcccggcgaggctccgagtccgactcggatcgctcc
tcctccagctcttcctcacgctcatcttcatcgtcttcatcctcctcttcttcctcctcg
cactctggctcaagctcttcctcctcctcatcatcttgctcctccggctcttcttcgtca
tcgtcgtcctcttcctcttctgatgacagtgaaagcgagggagaggaagccaagaagaaa
gtgcctgtaaccgcgagtgttaaaggtttcgacgaggacagcgtggcgtctctgagcacc
acccaggacgaaatgctagactctcacatgtctgagaacggagtcgcaaacaactcctcc
catcctttccagggaggaggctacatgttggctgcatcgtactggcccaaggaccgtgtg
ataatcaaccgcctggacagcatctgccaggctgtgcttaagggcaagtggcctggccac
cgccgggtctatgagcccggcagcacggtcgcctccttctacaccaccaagctgctggac
aacgccaacagcctgtgcgaggacccctctgcctctccacaagggtcaaaggtgaccaag
catgttgcagaaaacaaggagttctcagtaaaactcaatgatcaggagggcggactaaag
ctgacctttcagaaacagggcttaccggtaaagaggccccttgaggccgaagagggccca
caggcccagcagcagtatctggcccggctccatgagctgcagagcgcttcagacacaggc
ctggctgacataaccaagccccaaagcagtttccagactgacgttcacagcagccatgct
gtctctccttcagttattccgggtgttagtggtcagatgaggctgaatggagcagtggac
ggtcagcccatggttaagaagagaaggggaagaaggaagaatgttgaaggaatggagctg
ctcttcatgaataagaataaatcacctattaatccagatccggtggctccaggatggggt
ggaattggtcaggtgggaatcccaggagctgctgtaccaatgaactccagtcagatccct
gcagacacagacaccagggtccctgttatcaaccttaaagatggcacccgactagcaggg
gacgacgctcctatgaggaaagatctagaccagtggcttagggagcatcctggttttgtg
gcggatacaggagcttttatcccaggggtgaataagatgcagatgcagttccacttccag
gatggacgaccgaagcagaagaggcaccgctgcaggaatcccaacaagatcgacgtgaac
agtctaacaggggaggaaagggtgcagatcataaacaggaaaaatgctcgaaagatcggt
ggagcttttgctcctcctctgaaggatctgtgccggttccttcaggaaaatccagagtat
ggggtcccaccagaatgggctgacgtggttaaacagtcgggttatctccctgagagcatg
tttgaccggatcctgacgggacccatcgttcctgaggaggtcagccgacgaggacgccga
cccaaaaaccctctggccaaggctgcggcagccgcagcgatgcccagctcagcaggctcc
accctgggtttgaaccctttgctggccaacggcatcctctctggaatggacctcggcagt
ctgcaggccttccagcaaaacctccaaagtttacagtccctgcagctgaccgcaggcctc
atggggctgccgcccgatgcaagcaacctggctgctagtaaccttgctgccatgtttccc
atgatgctttctggcatggcaggattgccaaacctgctcaacatgggcggcctgcttgga
aaaccgactcaggaagttgcaggaggttctgaagagagggcgaagggaaccgacacgagt
ggagctacggatcagtcgaatgccccgcctcatagttcagaaaccaaaggagaaaggaca
gagagctccaacgtgactccttcctccacttccagctctgcttcctctgccaccgtcaca
caaagtgcttcagctgcctctgcagctaccagtcacccactttctcttaaccccttatta
ctctccagtatgctttacccagggatgcttctcactccaggccttaaccttcctgtgtct
gccacacagccacagagcccaaacagcgacccttcaacccttccacccgctgctccttcc
gctccttcagcctcccagtcgttaccgactgaggcaaggcagccatccggaaagggtgaa
gaggaggggccagaggaggctttggatgaagaggaggaggacgaggaatctgcagaaccg
agagaaaacagtggtcccgaatgttcagcgaaagcggagtcctcttcatcagagtctggg
agctcctcctcatcctccgatgattcagactccagtgacgaggactga
DBGET
integrated database retrieval system
