Cyprinodon tularosa (White Sands pupfish): 119795471
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Entry
119795471 CDS
T07496
Symbol
trim23
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM23
KO
K07963
tripartite motif-containing protein 23 [EC:
2.3.2.27
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ctul04121
]
119795471 (trim23)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
ctul04031
]
119795471 (trim23)
Enzymes [BR:
ctul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119795471 (trim23)
Ubiquitin system [BR:
ctul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119795471 (trim23)
GTP-binding proteins [BR:
ctul04031
]
Small (monomeric) G-proteins
Arf/Sar Family
Others
119795471 (trim23)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arf
Roc
Ras
SRPRB
G-alpha
zf-RING_UBOX
zf-B_box
zf-RING_5
Gtr1_RagA
zf-RING_2
MMR_HSR1
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
119795471
NCBI-ProteinID:
XP_038159427
LinkDB
All DBs
Position
Unknown
AA seq
580 aa
AA seq
DB search
MAAAAAGINKQGAGATMEPCLRHGRGAHGGSVKVLECGVCEDVFSLQGDKVPRLLLCGHT
VCHDCLTRLPLHGRAVRCPFDRQVTELGDSGVWGLKKNFALLELLERLQNGASNQSGMAE
DVLKGMGECIIRCDEDESHTASVYCTVCATHLCAECSQLTHSTRTLAKHRRVPLADKPHE
KMLCPQHQVHAIEFVCLEEACQTGPLMCCVCKEYGKHQGHKHALLESEANQIRASILDMA
HCIRTFTDEVSEYSRKLVGIVQQIEGGEQIVEDGVGMAHTEHVPGTAESARSCVRAYFAD
LHETLCRQEEMALSVVDAHVRERLIWLRQQQEDMTILLSQVSTACLHCEKTLQQDDCRVV
LAKQEINCLLETLQKQQHQFTELADHVQLDAGIPVTFTKDNRVHIGPKMEIRVVTLGLDG
AGKTTILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGGKHKLRPLWKHYYLNTQA
VVYVIDSCHRDRLMEAHSELAKLLTEKELRDALLLIFANKQDVPGALSVEEMTELLSLHK
LCCGRSWHIQGCDARSGMGLHEGLDWLSRQLVAAGVLDVA
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgctgcagcagggataaacaagcagggcgctggagcgacgatggagccttgt
ctccggcatggaaggggagcccatggaggcagcgtcaaggtgttggagtgcggtgtgtgt
gaggacgtgttctccctgcagggggataaggtccctcgccttctgctctgcggtcacacg
gtgtgtcatgattgtctcacccggctgcctctgcacggcagagcggtccgctgccccttc
gacagacaggtcacagagctgggggactctggagtttggggtctaaagaagaactttgct
ctgctagaactcctggagcgactccagaacggagcgagcaaccagtcaggaatggcggag
gatgttttgaaagggatgggagaatgtataatccgctgcgacgaggacgagagccacacg
gcgtccgtgtactgcacggtgtgcgccacgcacctgtgcgccgagtgctcccagctcacc
cactccacccgcacgctggccaaacaccggcgagtgccgctggctgataaaccgcacgag
aagatgctctgcccgcagcaccaggttcacgccatcgagtttgtctgtctggaggaggcc
tgccaaacggggcctctcatgtgctgcgtgtgtaaggaatacggcaagcaccagggacat
aagcacgccctcctggagtcagaagccaatcagatccgtgcgtccatcctggacatggcc
cactgcatccgtacgttcaccgacgaggtgtcggagtactccaggaagctggtgggcatc
gtgcagcagatcgagggcggcgagcagatcgtagaggatggagtcggaatggcgcacacg
gagcatgttcccggcacagcagagagcgctcgctcctgtgtccgcgcttacttcgccgac
ctccatgagaccctgtgtcggcaggaggagatggccctgagcgtggtggacgctcacgtc
agggagcggctgatctggctgaggcagcagcaggaggacatgaccatcctgctgtctcag
gtctccactgcctgcctgcactgcgagaaaacgctgcaacaggacgactgcagagtggtg
ctggcaaagcaggagatcaactgtttgttggagacgcttcagaagcagcagcaccagttc
actgagctggcagatcacgttcagctggacgccggcatccctgtcaccttcaccaaggac
aacagagtccacatcggcccaaagatggagatccgagtcgtgactctgggactcgacggg
gcgggaaagaccaccatcctttttaagctgaagcaggatgagttcatgcagcccatcccg
accatcggtttcaatgtggagacggttgaatataaaaacctgaagttcacaatctgggac
gttggcgggaagcataagctgaggcctctgtggaagcactattatctaaacactcaggct
gtggtgtacgtgatcgacagctgccacagagaccgactgatggaggcgcacagcgagctg
gccaaactactgacggagaaggagctgcgcgacgctttgctgctcatctttgcaaacaag
caggacgttcccggcgcgctgtctgtggaggagatgacggagctgctgagcctccacaag
ctgtgctgcgggaggagctggcatatccagggctgcgacgcccgcagcgggatgggactc
cacgaggggctggactggctctccagacagctggtggcagcaggggtcctggatgtagcc
taa
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