Cyprinodon tularosa (White Sands pupfish): 119795944
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Entry
119795944 CDS
T07496
Symbol
stxbp5a
Name
(RefSeq) syntaxin-binding protein 5a isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ctul04131
]
119795944 (stxbp5a)
Membrane trafficking [BR:
ctul04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
119795944 (stxbp5a)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
119795944 (stxbp5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
ANAPC4_WD40
WD40
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Lgl_C
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
CFAP43_N
Synaptobrevin
VPS8_N
Beta-prop_VPS8
WD40_like
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_2nd
Motif
Other DBs
NCBI-GeneID:
119795944
NCBI-ProteinID:
XP_038160126
LinkDB
All DBs
Position
Unknown
AA seq
1147 aa
AA seq
DB search
MKKFNIRKVLDGLKEASSSSSSSSSTPSVQVGPQENNLIQETLQSEHFQLCKTVRHGFPY
QPSSMAFDPVQKILAIGTQSGALRLFGRPGVECYCQHEGGAAVIQLQFLINEGALVSALA
DDSIHLWNLRQKRPAVLHSLKFNRERITFCHLPFQSKWLYIGTERGNIHIVNVESFMLSG
YVIMWNKAIELSSKTHPGPVVHISDNPMDEGKLIIGYESGIVVLWDLKSKKADYRYTYDE
AIHSVAWHHEGKQFICSHSDGTLTIWNIRGQGKPIQTITPHGKQPKDGKKPEPCKPILKV
EYKTTRNGDPFIIFSGGLSYDTVGRRPCLTVMHGKSIAVLEMDYPIVDFLTLCETPYPND
FQEPYAVVVLLEKDLVVIDLSQNGYPIFDNPYPLTIHESPVTCCEYFADCPVDLIPALYS
VGSRQKRQGYSKKEWPISGGNWGQGTQSFSEIIITGHADGTVKFWDASAIMLQVLYKLKT
AKIFDRNRSKEDKGSSEVSDEDPFAIQIMAWCPESRMLCVAGVSANVIIYRFSKLEVTTE
VVQLLEVRMQYELNEMESPDGGGGEQTSAHPTPGASPQTSGPPSHPSTSSNNSDGGNIPC
LKVRSSPLKQSPGYQVDLVVQSVWVSGEPPQQITSLVLNSSYGLVVFGNSNGLAVVDYIQ
KTVVLNLGTVELYGSNDPYQRQPRSPRKTRQPSGGLCDINEYSATSEDRCKSPTSVLMSH
SNLQQFYNGGGRGAKMSRKLSLPTELKPDLVLLSVCPPRGANPLDHRDNSFSRSRSSSVT
SIDKEAREAISSFLFCETFARKGDCTLTPCLYVGTSLGTVLVLAITLPSAGEQRQLQPVI
ISPTGMLVRLKGSIMRISFLDSTGLLLAPAFEPWYEPNITADGEEREKIRKRRPVSVSPS
TSQELNESQFAVVCSEKQAKVMSLPSQTCIYKHSITENSFILRADIVQMNQGVCLACFCA
NGHIMTLSVPGLRPLMDVNYLPLTDMRIARTFCFTNLGQAMYLCSPTEIQRITYSQETCE
NLQEMLGELFTPVETPEAPNRGFFKGLFGGGAQSLDREELFGEVAAGKASRSLAQHIPGP
GGIEGMKGAASGVVGDLARARIALDERGQKLGELDERTAAMMASADSFSKHAHDMMLKCK
DKKWYQF
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttcaacatcaggaaggtgctggacggtttgaaagaggcgtcttcctcctcc
tcctcttcctcctccacgccgtctgtccaagtagggccccaggagaacaacctgatccag
gagactcttcaatccgagcatttccagctctgcaagactgttcgtcatggcttcccctat
cagccgtcatccatggctttcgatcccgtgcaaaagatcctggccatcggtacccagagt
ggagctctcagattatttggtcgccctggtgttgagtgctactgtcagcatgaaggtgga
gcagctgttatccagctgcagtttctcattaatgagggagcattggtgagcgctttggca
gatgacagcatccacttgtggaacctgaggcagaagagaccagctgtcctccattccctc
aagttcaacagagagagaataactttctgccacctgccgttccagagtaaatggctgtac
attggtacagaacgagggaacatccacattgtgaacgtggagtccttcatgctctcaggc
tacgtcatcatgtggaacaaagccattgaactttcctccaagacccaccctgggccagtt
gtccacataagtgataaccctatggatgagggaaagcttataattggatatgagtctgga
atcgtggtcctgtgggatttgaaatccaagaaggcagactaccgctacacttatgacgag
gctatccattcagttgcatggcatcatgagggcaagcagtttatttgcagtcactcagat
ggaactctgaccatatggaacatcagaggccaaggaaaacccatacagacaatcacacca
catggaaaacagcccaaggatggaaagaagccagagccgtgtaaacccattcttaaagtg
gaatataaaacaacaagaaacggggacccttttatcatattctctggaggtctgtcctat
gacacggtaggacggaggccatgtctgacagttatgcatggaaaaagtattgctgtgctg
gagatggattatcccatagtagactttctaacactatgtgagacaccatatcctaatgat
tttcaggagccttatgctgtggtggtccttttagaaaaagatttagtggtgattgacctt
tcacaaaatggttaccccatatttgataacccatatcctctaacaatccatgagtctcct
gtaacctgctgtgagtactttgccgactgccctgtggacctcattcctgcactttactct
gttggctcgcggcaaaaacgacagggttacagcaaaaaggagtggcccataagtggtgga
aactggggacagggcacacaaagcttctctgagatcatcatcaccgggcatgctgacgga
acggtgaagttctgggatgcctctgcaataatgctccaggtcctctataagctaaaaaca
gccaagatttttgacaggaaccgatccaaggaagacaagggtagcagtgaggtttcagac
gaagatccttttgccattcagattatggcctggtgccccgagagcaggatgctttgtgtg
gctggggtgtcagccaatgttatcatctaccgcttcagcaagctggaagtaaccactgag
gtggttcagttactagaggtgcgaatgcagtacgagctgaacgaaatggagtctccagat
ggtggaggtggtgagcaaacatcggcacatcccacccctggtgcctcccctcagacgagc
ggcccaccttcccatccttccaccagcagcaacaactctgacggaggcaacataccctgc
cttaaagtgcgaagtagtcctctgaagcaatctccaggctaccaggtggatttggtggtc
cagtctgtgtgggtgagtggagagcctcctcagcagatcacaagtctggtgctgaattca
tcctatggcctagtggtgtttggcaatagcaatggcctagcagtggtggactacatccag
aaaactgtggtccttaacctgggaacggtggagctttacggatccaatgatccctaccag
agacagcctcggtcgccaagaaaaacacggcagccttctggaggtttgtgtgacattaac
gagtactcggccacatctgaggaccgctgcaagtctccaacttcagtgttgatgtcacac
agcaatcttcaacagttctacaatggaggtggtagaggagcaaagatgtcacggaaatta
agcttgcctactgagctaaagccagacttggtccttctttctgtgtgcccgccgcggggt
gccaacccgttagaccaccgggacaactccttcagccgctcacgctcctccagcgtcacc
agcatcgacaaagaagcccgggaagctataagttcctttctattctgcgagacttttgcc
cgtaagggggactgcactttgacaccttgcctctatgtgggcacttcacttgggactgtg
ttggttctggctatcactttgccatctgctggggagcagcggcaactgcaaccagttata
atttcccctacgggtatgttggtgcggcttaagggaagcatcatgcggatctcttttctg
gactccactggtttattgcttgctcctgcatttgaaccctggtatgagcccaacatcaca
gcagatggtgaagaaagagagaagatccgaaagcggcggcctgtctctgtttcaccttcc
acctcgcaggagctaaatgagagccagtttgctgtggtgtgctccgagaagcaggccaaa
gtcatgtcccttccttcccagacttgcatctacaaacacagtatcacagaaaattctttt
atcttacgggcagacattgtgcagatgaaccagggagtgtgcttggcttgtttttgtgcc
aatggtcacataatgacactcagtgtgccaggactgagaccgctcatggatgtaaactac
ctacctttgacagacatgcggatagctaggacgttctgcttcacaaacctaggccaagcc
atgtacctctgctcacctactgagattcagaggataacttacagtcaagaaacttgtgaa
aatctacaggagatgttgggtgaactttttacaccagtggaaacaccagaggcaccaaat
agaggtttttttaaaggcctctttggaggaggagcacagtcacttgacagggaagaacta
tttggcgaggtggcagctgggaaggcatctcgaagtctggctcagcacatccccggccca
ggtggcattgaggggatgaagggggctgcctcgggtgtggttggagacctagcacgtgcc
cggatagcgctggatgagagaggccagaaactgggtgaactggatgagaggacagctgcc
atgatggccagcgcagattctttttccaaacatgcccatgatatgatgctgaaatgcaaa
gacaaaaaatggtaccaattctga
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integrated database retrieval system
