Cyprinodon tularosa (White Sands pupfish): 119796281
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Entry
119796281 CDS
T07496
Symbol
toporsa
Name
(RefSeq) topoisomerase I binding, arginine/serine-rich a
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ctul04121
]
119796281 (toporsa)
03036 Chromosome and associated proteins [BR:
ctul03036
]
119796281 (toporsa)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ctul03037
]
119796281 (toporsa)
Enzymes [BR:
ctul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119796281 (toporsa)
Ubiquitin system [BR:
ctul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119796281 (toporsa)
UBL E3 ligases
119796281 (toporsa)
Chromosome and associated proteins [BR:
ctul03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
119796281 (toporsa)
Cilium and associated proteins [BR:
ctul03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
119796281 (toporsa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-C3HC4_4
RING_XB3-XBAT31
zf-RING_5
zf-ANAPC11
Baculo_IE-1
Motif
Other DBs
NCBI-GeneID:
119796281
NCBI-ProteinID:
XP_038160701
LinkDB
All DBs
Position
Unknown
AA seq
781 aa
AA seq
DB search
MSAIKVALQQSPKGRRSKTAKTMSAEVSPDSKCPICLDAFHNMSYLDRCLHKFCFRCILE
WSKNKPECPLCKQPFSSIYHSIKSDQDFQKYELKQQVDNSSFGYFEGVRFRYRTTLTGVH
RQMRRTSPPPDNGVMFEASANFQQQRQDRYIRRMMSRLAAKRRAASEGRAVNNVREQEMI
NFRRELYRRGVRVQNVRDGGRSRDTSAEFYRRNPACLHRLVPWLKRELMVLYGAHGSLVN
IVQHIIMSRITRYDMEDGAIQGELRPFLQGRTEHFLHEFINFARSPFNMEAYDQHAVYDC
PAPSSNEHSSSNSSVIAISEEEESSADVEPPGIAASALGQSLWDDETPGPSYSTAAETSR
PQLGSVLELDSESSSEEEPLELNVSPQEITSHSPVNVACAERTDNGCASPDSDDCVIVGY
IKPAAERTPELVHLSSDSDDSSIEETKDAPIQSQHIRFTSCSPAASHRSDSSRAKNVQTD
HQHRSSSKDRPKSKVHKHSRTDKRFEERERSTERRKSKEREHKRKKSNSKSRGSKHSRSP
VISHGSFGSHSSSGHFSNSDRVHAERDSYQSYTHYRHERNGSVTHYTQRRSYYYSSRTYS
PSESRSRSRDSSQRRRRRRPRSGSQSSRSPSPDRRSHHDKPVGKRKCKAKHLEEPPKKDQ
NLSNESNSVSVTKHKKKSKERHHKKPKDRSRKRSGSRELDSERHRHHHKKKKKHKKKSKK
SKSTERKSKSSTNVITIESDSDSIANQGVSPVSRTTENPSDCAAADDRVNLTPADHSLQS
H
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaatcaaggttgccctgcagcaaagcccgaagggtagacgaagtaaaaccgca
aagacgatgtctgccgaagtgtctccagactccaagtgccccatctgtttggatgcattt
cataacatgtcgtacttggaccgctgcctgcacaaattctgcttccgctgtattctggag
tggtcgaagaacaaacccgagtgtccactttgtaaacagccatttagttcaatctatcac
agcataaaatcggaccaggacttccagaagtatgagctgaaacagcaagtggataattcc
tcctttggttatttcgagggagtgcggtttaggtaccgaacgactctcactggagttcat
cgacagatgaggagaacctctccgcctccagacaacggtgtaatgtttgaagcctctgca
aatttccaacagcagcggcaggatcgttacattcgacgcatgatgagtaggttggcggct
aagaggagagctgcgagcgaaggcagggctgtgaacaacgttagggagcaggaaatgatc
aacttcaggagggagctgtaccgacggggggtgagggttcaaaacgtgagagacggggga
cgctcccgagacacctctgctgaattttaccgaagaaatcccgcctgtctacatagactg
gtcccgtggttgaaaagggaactcatggtgctttatggggcccacggctctctggtcaac
atagttcagcatatcatcatgtcacgcatcacacgctacgacatggaggacggggccatc
cagggagaactcagaccctttctgcagggccggacggagcattttctccatgaatttatc
aattttgcaaggtctcccttcaatatggaggcctatgaccagcatgctgtttatgactgc
ccagcaccctcttcaaatgagcacagcagctccaactcatctgtaatcgccatctcagag
gaggaggaaagctctgccgatgtggaacctcctgggatcgccgcttctgctttgggtcag
tctttatgggacgatgagacaccagggccgtcatattcaactgcagcagagaccagcaga
ccacaacttggttcagtcctggaattggactcagagagcagctcagaggaggaaccacta
gagcttaatgtttctccacaagagattacatcgcatagcccagtcaatgttgcttgtgct
gagcgcaccgataacggctgcgcgtctcctgacagtgacgactgtgttatagtgggatac
attaagccagcagcagagcggactccagagctggtccatctctcctctgactctgacgac
tcttccattgaggagaccaaggacgctcccatccagtcccaacacatccgtttcaccagc
tgtagccctgctgcttcacacagaagcgattctagtagggctaaaaatgtccaaacagac
caccaacatcggtcgtcttcaaaagacagacctaaatcaaaagtacacaaacactccaga
acggataaacggtttgaagaaagagaaagatcaacggagagacgcaagtcgaaggagaga
gagcacaagagaaagaagagcaactcgaagagcagagggagcaagcactccagaagtccg
gtaatttctcacggcagtttcggctctcattccagcagtggacacttctcaaatagtgac
agagtccacgcggagagggacagctaccagtcatacacccattacaggcatgagaggaac
ggcagcgtgactcactacacacagaggcggtcctactattacagcagccgcacgtactcg
ccctctgagtccaggagtcgcagcagggactcctctcagagaagacgcaggaggcggccc
cgatccgggtctcagtccagccgatccccttcgcctgataggaggtctcatcatgacaag
cctgtaggcaaaaggaaatgcaaagcaaaacatctggaggagccacccaaaaaagaccaa
aacctctccaacgaaagcaactcggtgtctgtaacgaaacacaagaagaaaagcaaagag
aggcaccataaaaaacctaaagacaggtcgaggaagaggagcgggagcagagaacttgac
agtgaacgacacagacaccaccataagaagaagaagaaacacaaaaagaaaagtaaaaaa
agcaagagcactgagcgcaaatcgaagtcctcaacaaatgtgatcaccatcgaaagcgac
agcgattctattgccaatcagggtgtcagtcctgtcagcaggaccactgaaaatccctct
gactgcgctgctgctgatgacagagtaaacctcacgcctgcggaccacagtttacaatca
cattga
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integrated database retrieval system
