Entry |
|
Symbol |
si:ch211-79m20.1
|
Name |
(RefSeq) putative mediator of RNA polymerase II transcription subunit 12 isoform X1
|
KO |
K17386 | platelet-derived growth factor subunit B |
|
Organism |
ctul Cyprinodon tularosa (White Sands pupfish)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:ctul00001]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119796318 (si:ch211-79m20.1)
04020 Calcium signaling pathway
119796318 (si:ch211-79m20.1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119796318 (si:ch211-79m20.1)
04540 Gap junction
119796318 (si:ch211-79m20.1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
119796318 (si:ch211-79m20.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:ctul04052]
119796318 (si:ch211-79m20.1)
00536 Glycosaminoglycan binding proteins [BR:ctul00536]
119796318 (si:ch211-79m20.1)
Cytokines and neuropeptides [BR:ctul04052]
Cytokines
Growth factors (RTK binding)
119796318 (si:ch211-79m20.1)
Glycosaminoglycan binding proteins [BR:ctul00536]
Heparan sulfate / Heparin
Growth factors/receptors
119796318 (si:ch211-79m20.1)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
551 aa
MKSWVLLLAALLSARLRLGNAEGDPLPQSLVNLVWNSPISSVEDLKLLLQQEASAIEDKE
DEHHDLLNPTHGRYIRSVVEPQVAEPAVCKVRTEVMEITRSMLDRNNAHFMLWPPCVEVQ
RCSGCCNSDQLQCVATVTSRRYLKVLKIQFKNKKPQYDNVVIPVEDDVSCSCQRSAPSSS
SSSSSAAFVSQPNPLAPPPQKPPASSNLPLSPPRTPHALPPKTQTSKADLHRLDDLKHNQ
HHHLPHERDPLARQWQQGSYTQLVRWTQPRVHQAPTHVHTGVHHTTAGFQSLVGTRPSEA
MAKHTIMESPQQVGHGSGLDKSQEETGEEIPHHDHEQRQQQLLKHQQRQEHQYHPHPPYP
QQYTPGDEDQELRAQYLLHAPQSDSSLSKVSITQAPKTVQDPTFFTSVTQKDSITNQKYT
KEIPHELIETKGDGQKEGTEMLAKSRTSSQTETTNHKQEKDSNLNEETGHLTEQERRQRL
LEIVQREPEKTPVLHAHQRPKPTTFNSAVLSTVAPMSTAGRQVPFRPAFPRRRKRKHRKR
ISKAAMRAMIM |
NT seq |
1656 nt +upstreamnt +downstreamnt
atgaagtcctgggtcctgctgctggctgcgctcttatcggcccgtctgaggctcggtaac
gctgagggcgatccactccctcagtcactggtcaaccttgtgtggaactctcccatctcc
tcagtggaagacctaaagctgctgctgcagcaggaggccagtgcaatagaagataaagag
gacgagcaccacgatcttctaaacccaacccatggtcgatatattagaagtgttgtggaa
ccacaggttgctgagccggcagtatgtaaagtcagaacagaggtgatggaaataacaaga
tccatgctggatcgtaacaacgctcactttatgctgtggcctccatgtgtggaagtgcag
cgatgttcaggctgctgcaactcagatcagctgcagtgtgttgccactgtcacctccaga
agatacctaaaggtgttaaagatccagtttaaaaacaagaaacctcagtatgataatgtc
gtcatcccagtggaagatgatgttagttgttcttgccagcgatctgctccatcatcatcg
tcttcttcctcatcagctgcctttgtctctcaaccaaaccctcttgcacctccaccacaa
aaaccacctgcatcctccaacctacccctgtccccaccccgcacccctcatgcacttcca
ccaaagactcaaacttccaaggcggacctgcatcgcctcgatgatctaaagcacaatcag
catcaccaccttccacatgagcgtgatccgttggcgagacaatggcagcagggcagttac
actcaactggtgcgctggacgcagcctagagtgcatcaagcccccacacatgtgcacact
ggagtgcaccacacaacggcagggtttcaaagcttggtgggtaccaggccgtctgaggca
atggcaaagcacaccattatggaaagcccacaacaagtcggacatggaagcggcttagat
aagagccaggaggagactggtgaggaaatcccccatcatgatcatgaacagcggcaacag
caattgttaaagcaccagcaaaggcaggagcatcaatatcatccacacccaccctaccca
caacaatacacccctggagatgaggaccaggagctaagggcgcagtatctgcttcatgct
ccccagtcagacagttctctttcaaaggtcagcataacacaggcccccaagacagtacaa
gatcctacatttttcacatctgtcactcaaaaagactcaataaccaaccaaaaatataca
aaggaaattcctcacgaactcatagagaccaaaggagatggtcaaaaagaggggactgag
atgttagctaaaagcaggacctcatctcagacagagacaaccaatcacaagcaagagaaa
gactctaatctgaatgaggagactggccatttaacagagcaggagagaagacagaggctg
ctggagatagtacagagggagccggaaaagacgcctgttctgcatgctcaccaaagacca
aaaccaacaacatttaattcagcagttctttccacggtagcgccgatgtcaacagcaggt
cgtcaggtaccgttccgacctgcctttccccgtcgccgaaaaagaaaacaccgcaaacgt
atcagcaaagctgctatgagggctatgatcatgtag |