KEGG   Cyprinodon tularosa (White Sands pupfish): 119796318
Entry
119796318         CDS       T07496                                 
Symbol
si:ch211-79m20.1
Name
(RefSeq) putative mediator of RNA polymerase II transcription subunit 12 isoform X1
  KO
K17386  platelet-derived growth factor subunit B
Organism
ctul  Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04010  MAPK signaling pathway
ctul04020  Calcium signaling pathway
ctul04510  Focal adhesion
ctul04540  Gap junction
ctul04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:ctul00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    119796318 (si:ch211-79m20.1)
   04020 Calcium signaling pathway
    119796318 (si:ch211-79m20.1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    119796318 (si:ch211-79m20.1)
   04540 Gap junction
    119796318 (si:ch211-79m20.1)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    119796318 (si:ch211-79m20.1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:ctul04052]
    119796318 (si:ch211-79m20.1)
   00536 Glycosaminoglycan binding proteins [BR:ctul00536]
    119796318 (si:ch211-79m20.1)
Cytokines and neuropeptides [BR:ctul04052]
 Cytokines
  Growth factors (RTK binding)
   119796318 (si:ch211-79m20.1)
Glycosaminoglycan binding proteins [BR:ctul00536]
 Heparan sulfate / Heparin
  Growth factors/receptors
   119796318 (si:ch211-79m20.1)
SSDB
Motif
Pfam: PDGF PDGF_N Gemini_AL1 INPP5B_PH
Other DBs
NCBI-GeneID: 119796318
NCBI-ProteinID: XP_038160746
LinkDB
Position
Unknown
AA seq 551 aa
MKSWVLLLAALLSARLRLGNAEGDPLPQSLVNLVWNSPISSVEDLKLLLQQEASAIEDKE
DEHHDLLNPTHGRYIRSVVEPQVAEPAVCKVRTEVMEITRSMLDRNNAHFMLWPPCVEVQ
RCSGCCNSDQLQCVATVTSRRYLKVLKIQFKNKKPQYDNVVIPVEDDVSCSCQRSAPSSS
SSSSSAAFVSQPNPLAPPPQKPPASSNLPLSPPRTPHALPPKTQTSKADLHRLDDLKHNQ
HHHLPHERDPLARQWQQGSYTQLVRWTQPRVHQAPTHVHTGVHHTTAGFQSLVGTRPSEA
MAKHTIMESPQQVGHGSGLDKSQEETGEEIPHHDHEQRQQQLLKHQQRQEHQYHPHPPYP
QQYTPGDEDQELRAQYLLHAPQSDSSLSKVSITQAPKTVQDPTFFTSVTQKDSITNQKYT
KEIPHELIETKGDGQKEGTEMLAKSRTSSQTETTNHKQEKDSNLNEETGHLTEQERRQRL
LEIVQREPEKTPVLHAHQRPKPTTFNSAVLSTVAPMSTAGRQVPFRPAFPRRRKRKHRKR
ISKAAMRAMIM
NT seq 1656 nt   +upstreamnt  +downstreamnt
atgaagtcctgggtcctgctgctggctgcgctcttatcggcccgtctgaggctcggtaac
gctgagggcgatccactccctcagtcactggtcaaccttgtgtggaactctcccatctcc
tcagtggaagacctaaagctgctgctgcagcaggaggccagtgcaatagaagataaagag
gacgagcaccacgatcttctaaacccaacccatggtcgatatattagaagtgttgtggaa
ccacaggttgctgagccggcagtatgtaaagtcagaacagaggtgatggaaataacaaga
tccatgctggatcgtaacaacgctcactttatgctgtggcctccatgtgtggaagtgcag
cgatgttcaggctgctgcaactcagatcagctgcagtgtgttgccactgtcacctccaga
agatacctaaaggtgttaaagatccagtttaaaaacaagaaacctcagtatgataatgtc
gtcatcccagtggaagatgatgttagttgttcttgccagcgatctgctccatcatcatcg
tcttcttcctcatcagctgcctttgtctctcaaccaaaccctcttgcacctccaccacaa
aaaccacctgcatcctccaacctacccctgtccccaccccgcacccctcatgcacttcca
ccaaagactcaaacttccaaggcggacctgcatcgcctcgatgatctaaagcacaatcag
catcaccaccttccacatgagcgtgatccgttggcgagacaatggcagcagggcagttac
actcaactggtgcgctggacgcagcctagagtgcatcaagcccccacacatgtgcacact
ggagtgcaccacacaacggcagggtttcaaagcttggtgggtaccaggccgtctgaggca
atggcaaagcacaccattatggaaagcccacaacaagtcggacatggaagcggcttagat
aagagccaggaggagactggtgaggaaatcccccatcatgatcatgaacagcggcaacag
caattgttaaagcaccagcaaaggcaggagcatcaatatcatccacacccaccctaccca
caacaatacacccctggagatgaggaccaggagctaagggcgcagtatctgcttcatgct
ccccagtcagacagttctctttcaaaggtcagcataacacaggcccccaagacagtacaa
gatcctacatttttcacatctgtcactcaaaaagactcaataaccaaccaaaaatataca
aaggaaattcctcacgaactcatagagaccaaaggagatggtcaaaaagaggggactgag
atgttagctaaaagcaggacctcatctcagacagagacaaccaatcacaagcaagagaaa
gactctaatctgaatgaggagactggccatttaacagagcaggagagaagacagaggctg
ctggagatagtacagagggagccggaaaagacgcctgttctgcatgctcaccaaagacca
aaaccaacaacatttaattcagcagttctttccacggtagcgccgatgtcaacagcaggt
cgtcaggtaccgttccgacctgcctttccccgtcgccgaaaaagaaaacaccgcaaacgt
atcagcaaagctgctatgagggctatgatcatgtag

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