Cyprinodon tularosa (White Sands pupfish): 119796414
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Entry
119796414 CDS
T07496
Name
(RefSeq) interphotoreceptor matrix proteoglycan 2-like
KO
K19017
interphotoreceptor matrix proteoglycan 2
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ctul00536
]
119796414
Glycosaminoglycan binding proteins [BR:
ctul00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
119796414
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SEA
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
119796414
NCBI-ProteinID:
XP_038160860
LinkDB
All DBs
Position
Unknown
AA seq
1866 aa
AA seq
DB search
MVRGPACAMFQAFRLFLLLVAVSQAAGIKDGSVRLGSELNAESAAPPRLADLLKTSSGWE
LSRRRSKRSVFLQPGVRICSQESFEDVLASHQAYYQLRVCQEAVWEAFRIFLDRIPGTSE
YQTWVHACQQESLCISDIAKNFSSSEEHISMINRRMSRLRDRRPPSRIVTPAPTHTIPEL
TGPEAQPSTSSPQIITVTPGVPLSPVSSSLSPAVDHSQPAEPDQEETELPNAVPESLMVQ
TLEFSIDLVDPGYRELLGFPDSPQYVDLAKHLQDQMQHVFDQLPGFKAISVVGIRAEGIS
VHYAIVFENNVHQATSEKSDTATREPGSSADAGLRGMVTKALQEKASLPVDLDSLNFQPG
EVIILPKSTLAPTAEVLHESSEPESHNDFNVSIPEPEIDKHQPVAPLTPKEKENDLVTLL
DSTAVSPGETVTVTDGMMVISDRSPASQDVIDESEAIYVIEPEPSSHEQEEEELLIITHE
IETIHQDETGELVRVFIPTPPLLNQGETEAAFITPSPNLISEEDLTPVNKEGETPHLKVV
HFTPTAQILFSGAVSDKELSEITTPSIKPAAITDLPPTAPGPILQEDEDINTLPDEELVD
SAISKPKQGHILDKGSQDIEGLQTEVVPLEPGKAVDVRPDDGLEAIRPSLEPVEASEPGE
VVLEMSEPNGEATVEISVPDLEVESLQESTEEAGRVSDLDTAVDTSGTEAGEVQEQDLEA
DKAGVDDSTQEKEPTKATEPESRSKDEAKVIFNVETVETVQIEESLSETNKEETTPEVSV
NQVKEQGDIFHPDEAIVETTEQKEDKREEMIQVSLLVPQPEEHLMDVSEKEEEVELVGST
DEKVVEGPFHDISKEMAADVSDVTTKTPPENQILPDVPEDRFPDLTEERVTTVMVDREPG
DTKERVHGITEEMVPIVTEEPGSEVIEDRVAEVTMEPGFEVTQEGTIPKNVVENVPELIE
ELATEATVDRVPEVRQEITHITEGVSEVIEDGVPEIPEEQKELEGFEVGEEELVPKDLKE
IVLDRTEEAGPKATEERVPEAIEDKVPKVTEDMVPKVTEDSVPHVIEDEFSKASKETVSK
VTDEGINLHGVKDEVFEQEKPVPEVEQVPGVQQVPEVEPVSGVEPVPEVKPDPEVEPVSG
VQQVPEVEPVPGVQQVPEVEPVPGVQQVPEVEQVPGVEPVSAVEPVPQEEPVPEVEPVPE
VEPVPGVQQVPEEEPVPEVEPVPGVEPTPELEPVPEVEPVPEVEPVPEVVPVPEVKPVPE
VEPVPEVEPVPEVEPVPEVEPVPEVEPVPEVSASDELVDSDAKPPTEQKLPEGKKAEEAD
VIKPEAEKVGVPIHEERPMDVTELEPPPQTEEKIKDESKPPEQQMVSEKDKSDLLTTERE
QPKGSELEPEEGAIISEILPGEGVVETAESELRREITEPPAESIKILHTLDRLDDVFHKE
EGLQVVEEDKHSPPIDLDHHSPSLEGNLPIVPGLVQTPGEDLSTPELIHPITEAFYFEEK
DAVASRRPEPIESDLNTEAPSVSDFVTVTAAEEQVPPKDSRVTDDSSKESQEQETFMTAR
PFSDAFPTPPSAVDLVEVTSAGPTVDSGLTDLAEDRSEPGLSEPSVDAILKEAERGDTGG
PLTSPDVKEVSEELDQINVQRNKPGGDILSAGITVLPPVRYVTTPTMTTASHGQELIVFF
SLRLTNMDFSEDLFNKTSPEYRSLEHTLLDVLLPYLQANLTGFRNLEILNFRKGSVVVNS
KMKFARTVPYNITEAVRCILEEFCSSAARKLDMQIDRRSLDVEPADQADPCRFLACGDFS
SCVVNSWTKEARCLCEPGFLSEDNQPCRSVCVLQPDYCPDGECHIVPGRGAECRRKGGSL
RRDPSS
NT seq
5601 nt
NT seq
+upstream
nt +downstream
nt
atggtccggggaccggcctgcgccatgtttcaggcttttagactttttctgctgctggtc
gccgtttcacaggcagctggaatcaaagatggcagcgtcagactcggctcggagctgaac
gcagagtctgcggccccgccgcgtctggctgatctgctgaaaacgtcttcaggctgggag
ctcagcagacgtcgatccaagaggtcggtgtttttacagcccggggtgagaatctgctcc
caagagagctttgaggacgtcctcgccagccaccaggcctactaccaactcagagtttgc
caggaggcggtgtgggaggccttccggatctttctggacagaatccctgggacctcagag
taccagacatgggtccacgcctgtcagcaggagtccctctgcatctcggacatcgccaag
aacttcagcagctctgaggagcacatcagcatgatcaacaggagaatgagccgcctgaga
gacagaaggcctccgtcccggattgtgactcctgcaccgactcacaccatccctgagctc
acaggtcctgaagctcagcccagcacatcgtctccacagatcatcaccgtcacccctggt
gtcccgctcagtcccgtctcctcctcactcagtcctgctgtggaccacagtcagcctgct
gaacccgaccaggaggaaacggagctgcccaacgccgtccctgagagtctgatggtccag
accctggagttcagcatcgacctggtggatccaggctacagggagctgctgggcttcccg
gactcaccgcagtacgtcgacctggccaagcacctgcaggatcagatgcagcacgttttt
gaccaacttccaggattcaaagccatcagcgttgtgggaatccgggctgaagggatctcc
gtccactacgccatcgtctttgagaacaacgtccatcaagcgacctcagagaagtcggac
acagcaactagagaaccggggagctcagcggacgctggtctcagaggaatggtgaccaag
gctttgcaggagaaagcgtctctgccggtcgacctggactcactgaacttccaaccagga
gaagtaatcatcttgccaaaatcaacgttagcacctacagctgaagtactgcatgagtcc
agtgaaccagagtcgcataacgattttaacgtctccatccctgagccagagatcgataaa
catcagcctgtggctcctctcacccccaaggagaaggaaaacgaccttgtgaccctgctg
gattccaccgctgtctcacctggcgagacggtcacagtgactgatgggatgatggtgatc
agtgatcgttccccggcttcacaggacgttattgatgaatcagaagcaatttacgtgatt
gaaccagagccatcaagccacgaacaagaggaggaggaattgctcatcattacccatgag
attgaaaccattcatcaggatgaaaccggggaacttgtgcgtgtcttcatcccaaccccg
cctctgcttaatcagggggagacggaggctgcattcatcacgccgtctcctaacctgata
tcagaggaagacctgactcctgttaataaggagggagaaactcctcatttgaaagttgtt
cattttaccccaacagctcagatattattcagtggtgctgttagtgataaggagctgtct
gaaattacaactccaagcatcaagcctgccgccatcacagacctgccaccgacagcgccg
ggaccaatccttcaagaggatgaagacattaatactcttccagatgaggagctggtagat
tcggctatttccaaacccaaacaaggtcacattctggacaaaggatcccaggatattgag
ggtttgcaaactgaagttgtcccgctagagccaggcaaagctgtggacgttcgacctgat
gatgggcttgaggccattaggccaagtctcgagccagtcgaagcctccgaaccaggtgaa
gtagtgttagaaatgtcggagccaaatggcgaagcaacagttgaaatctcagtgccagac
ttagaagtggagagccttcaagagtcaactgaagaggcaggtcgagtttccgatctggat
acagcggtcgacacttcaggaacagaagctggtgaggtgcaagagcaagacctagaagca
gacaaagcaggagtagatgattctacgcaagaaaaagaaccgactaaagctacagagcca
gagtcaagaagtaaggatgaggcaaaggttatatttaatgtggaaacagttgaaacagta
caaatagaagaatccctatcagagacaaacaaggaggagaccacaccagaggtttccgta
aatcaagtcaaagagcaaggtgacattttccacccagacgaggcaatagttgaaactaca
gaacaaaaggaagacaagagagaggaaatgattcaggtgtctcttttagttcctcaacct
gaggaacatttgatggacgtctcagaaaaagaggaagaggtggagctcgttggctccaca
gatgaaaaagttgtagaagggccttttcatgacatctcaaaagaaatggcagccgatgtt
tcagacgtgacgacaaaaacgccacctgagaatcaaatattacctgatgtccctgaagat
aggtttcccgatttaacagaagaaagggtaaccacagttatggtcgacagagagcctgga
gataccaaggaaagagttcatggtatcactgaggaaatggttcccatagtcacagaggag
ccaggttctgaggttatagaggacagagttgcagaggttacaatggaaccaggttttgaa
gtcactcaggaaggaacgattcccaaaaacgtggtagaaaacgttcctgaacttatagaa
gagctggctactgaagccacagtagacagggttcccgaagtcagacaagaaatcactcac
atcacagaaggggtttctgaagtcatagaagatggagttcctgaaatcccagaggaacaa
aaagaacttgaaggttttgaagtcggcgaggaagaattggttccaaaggatctgaaagaa
attgttcttgaccggacagaggaagcaggtccgaaagccacagaggaaagagtccctgaa
gccatagaagataaggttcccaaagtcacagaagatatggttcccaaagtcacagaagat
agtgttcctcatgtcatcgaggatgagttttccaaagcctctaaggagacagtgtccaaa
gttacagatgaaggcatcaacctgcatggagttaaggatgaggtttttgaacaggagaaa
ccggttcctgaggtggaacaagttcctggggttcaacaagttcctgaggtggaaccagtt
tctggggtggaaccagttcctgaagtgaaaccagatcctgaggtggaaccagtttctgga
gtacaacaagttcctgaagtggaaccagttcctggagtgcaacaagttcctgaagtggaa
ccagttcctggagtgcaacaagttcctgaggtggaacaagttcctggggttgaaccagtt
tctgcggtggaaccagttcctcaggaggaacctgttcctgaagtggaaccagttcctgag
gtggaaccagttcctggagtgcaacaagttcctgaggaggaacctgttcctgaagtggaa
ccagttcctggggttgaaccaactcctgaacttgaaccagttcctgaggtggaacctgtt
cctgaggtggaaccagttcctgaagtggtaccagttcctgaggtgaaaccagttcctgag
gtggaacctgttcctgaagtggaacctgttcctgaagtggaacctgttcctgaagtggaa
ccagttcccgaagtggaaccagttcccgaggtgtccgcatctgatgaattggtagatagt
gatgcgaagcctcctacagagcagaagctacctgaaggtaaaaaagcagaagaagctgat
gtcattaaaccagaggctgaaaaggttggagttcccatacatgaggagaggccaatggac
gttacagaactagaaccccctccacaaaccgaagagaagattaaagatgaatctaaacct
ccagaacaacagatggtatcagaaaaagataaatctgaccttctcacaacagagagagaa
cagcctaaaggttcagagttggaaccagaagaaggtgcaatcatttcagaaatacttcct
ggggagggggttgttgaaacagcagagtcagaacttaggagggaaatcacagaaccccct
gcagagtccataaaaatccttcacaccttagacaggctggacgacgtcttccataaggag
gaaggtcttcaggtagtggaagaagataaacatagtcctcccattgatcttgatcatcac
agtccatccctagaaggtaatttacccatcgtaccaggactcgtccagaccccgggggag
gacctgagcacacctgagctcatccatccaatcacagaagccttttactttgaggagaaa
gacgcagttgcttccagacgtccagagcctatagagagtgacctaaacactgaagcacca
tctgtctcagatttcgtaactgtgacggcggcggaggagcaggtcccaccgaaggacagt
agagtcacagacgactcttcaaaggaaagtcaggaacaggaaacgtttatgactgctcga
ccattttcagatgctttccctacaccgccatctgccgtcgatttggttgaggtcacctca
gctggtccgactgtcgactctggactcactgatttagcagaggacagatcagaacccggg
ctgagcgaaccttctgttgacgccatcttgaaagaggcagagaggggagacactggaggc
ccactcacctctccagatgttaaggaggtttctgaggaactggaccaaatcaacgtccaa
cgtaataagccaggcggtgatatcttgtctgctggtattactgttttgcctcctgtgaga
tacgtgaccacacccaccatgaccacagccagccacggacaggagctcatagtgttcttc
agccttcgtcttaccaacatggacttctcagaagacctcttcaacaagacctctccagag
tacagatctttggagcatacccttttagacgtgctcctgccgtacctgcaggccaacctg
accggcttcaggaacctggagatcctcaacttcaggaagggcagcgtcgtggtcaacagc
aagatgaagttcgccaggaccgtcccttacaacatcaccgaggccgtccgctgcatcctg
gaggagttctgctcctcagctgccaggaagctggacatgcagatcgaccgccgctcgctg
gacgtggaaccagctgatcaggcggatccctgcaggttcttggcctgtggagacttttcc
agctgtgtggtgaacagctggactaaggaggcccggtgtttgtgtgagccgggcttcctg
tccgaggacaaccagccctgtcggagcgtttgtgtcctgcagccagattattgtccggac
ggagaatgtcacatcgttccgggacgaggagccgagtgcagacgaaaaggcggatctctg
cggcgagacccgagcagttag
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integrated database retrieval system
