Cyprinodon tularosa (White Sands pupfish): 119796421
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Entry
119796421 CDS
T07496
Symbol
lrfn5a
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ctul04990
]
119796421 (lrfn5a)
Domain-containing proteins not elsewhere classified [BR:
ctul04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
119796421 (lrfn5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
I-set
Ig_3
LRR_4
LRR_1
ig
LRR_9
Ig_2
fn3
C2-set_2
DHU1_N
Sp38
Ig_5
Motif
Other DBs
NCBI-GeneID:
119796421
NCBI-ProteinID:
XP_038160866
LinkDB
All DBs
Position
Unknown
AA seq
864 aa
AA seq
DB search
MLTMERLLLCMMLAVSMAVRAQICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRHTVEL
RLADNFVTSVKRKDFANMTRLVDLTLSRNTISFITPHAFADLENLRALHLNSNRLTRIGN
DTFSGMSKLHHLILNNNQLVLIHQGAFNDLLALEELDLSYNNLDSIPWESIQKMTSLHTL
SLDHNMLDYIPEGTFSLLQKLNRLDVTSNKLQKLPPDPLFQRAQVLATSGDMTPSSFALS
FGGNPLHCNCELLWLRRLKREDDLETCATPEHLAGRYFWSISEEEFLCEPPLITRFSHEM
RVLEGQRVALRCKARGDPEPAIHWISPEGKLVSNSSRTLVYNNGTLDILISTVKDTGSFT
CISSNPAGEAHQTVELVIIKLPHISNNTNNIQEPDPGSSDISTSTRGGANGSNVTGDVKG
GADKRVVTAEATSSTALIKFNFQRNIPGIRMFQIQYNGSQDDSLVYRMIPPSSKNFLVNN
LAAGTPYDLCVLAIYDDVITSLTATRVVGCVQFTTESEYMKCYFMQSQFLGGTMIIIIGG
IIVASVLVFIIILMIRYKVCNPGEGGKGVSLSMTNVHSQTNGQQAQGCVVTPSSSKHGSV
GLDELSADSKKRSGASGGGGREKDTVTQSSECSLPYCSTATSALSQSWGAHSPASGAEDQ
DKAGEQRAPAGIGSPTNASGSLNKSKRKPAPSKPGSSVSNAPASSPLPTSSTPSSALLPP
STPLENLNTNRNNSTSLNRSPAPPFVPSPFSPLHPASSPVPSIRFRETPVLRRAPRSGSS
LAKYQTLPTEEGGWNRPRRRRYSFSEEASKTHSPHQRVGGVTKLGRMARNKRSQSMSGML
LSKDEDGDSERGRCESDWILESTV
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgctaaccatggagaggctgttgctctgcatgatgctggcggtttccatggcggtgcgg
gcgcagatctgtccgaagcgctgcgtctgccaaatcctgtcacctaacctggcgacgctg
tgcgcaaagaagggtctgctgtttgttccgccgaacatcgacaggcacacggtggagcta
cggctggccgacaactttgtgacaagcgttaaaagaaaagactttgccaacatgacacgg
ctggtggacctgaccttatccaggaacaccatctccttcattacacctcatgcctttgca
gatctggaaaacctccgagctctacacctcaacagcaaccggctgacgagaataggcaat
gacacgttcagcgggatgtcgaagctacaccacctgatcctcaacaacaaccagctggtg
ctgatccatcagggagcgttcaacgacctgctggcgctggaggagctggacctcagctac
aacaacttggactccattccgtgggagtctattcagaaaatgacgagtctccacacgctg
agtttagaccacaacatgctggattacattccagagggaaccttctcccttctgcagaaa
ctcaaccggctggacgtcacctccaataagcttcagaagctcccaccagaccctctcttt
cagcgggcgcaggttctcgctacatccggggacatgacgccgtcgtccttcgcgctgtcg
ttcgggggaaatcctctccactgtaactgtgagttgctctggctgaggaggctgaaacga
gaggacgacctggagacgtgtgccacacctgagcacctggcgggtcgctacttctggtcc
atctctgaggaggagttcctctgtgagccccccctcatcaccagattctcccacgagatg
agggtcctggaaggacagagagttgcgctcaggtgtaaggccagaggggatccagaaccg
gccattcactggatttctcctgaaggcaaactggtgtctaactcctccagaaccctggtc
tacaacaacgggactctggacatcctaatcagcactgtgaaagacacgggctccttcacc
tgcatctcgtccaaccccgccggggaagcccaccagaccgtggagctggtcatcatcaaa
ctgcctcacatctccaacaacaccaacaacatccaagaaccagaccccggttcgtccgac
atttccacgtccacgcggggcggcgccaacggcagcaatgtgacgggtgacgtgaagggc
ggagccgacaagcgggtggtgacggcggaggccacgtcgtccaccgctctgatcaagttc
aactttcagcggaacatccccggcatcaggatgttccagatccagtacaacggcagccag
gacgactcgctggtttacaggatgattcctccatcaagcaagaacttcctggtcaacaac
ctggcagcggggacgccgtacgacctctgcgtcttggcgatctatgatgacgtcatcacc
tccctgacggccacgcgagtggtgggctgtgtgcagttcaccaccgagtcggagtacatg
aagtgttactttatgcagtcccagttcctgggcgggacgatgatcatcatcatcggaggg
ataatagtggcctcggtgctcgtcttcatcataatcctgatgattcgctacaaggtttgt
aacccaggtgagggaggtaaaggtgtttctttgtcgatgaccaacgtccactcgcagacc
aacgggcagcaggcgcagggatgcgttgtgactcccagctcctccaaacacggatccgta
gggctggacgagctctccgcggactccaagaagaggagcggagcgtcgggaggaggaggc
agggagaaggataccgtcacccagtcgtcagagtgctcccttccctactgctctacggcc
acgtccgccctcagccagagctggggggcccacagcccggcgtccggggctgaagaccag
gacaaagccggtgaacaaagagctccagctggcatcgggtcaccgaccaacgccagcggc
tccctgaacaagtcaaagcggaagccggctcccagtaagccggggtcctccgtctccaac
gcaccggcctcctctcccctccccacttcttccacccccagctctgccctgctcccccct
tccaccccattggagaacctcaacaccaaccgcaataactccaccagtctgaacagaagc
ccagcccccccctttgttccctcccccttctcccccctccatcccgcctccagcccggtt
ccttccatacgatttagagaaactccggttctgcggcgggctcctcgctccggctcctcc
ctggcaaagtaccagactcttcccacagaggagggaggctggaacaggcctaggaggagg
aggtactcgttcagcgaggaagcctcaaagactcactcgccccatcagagagtgggaggg
gtgaccaagttggggcgcatggcgcggaacaaacggagccagtccatgagcgggatgctg
ctctccaaagacgaggacggagactcggagagaggacgctgtgagtcggactggatctta
gaaagcaccgtctaa
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