Cyprinodon tularosa (White Sands pupfish): 119796430
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Entry
119796430 CDS
T07496
Symbol
tnpo1
Name
(RefSeq) transportin-1
KO
K18752
transportin-1
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119796430 (tnpo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctul03019
]
119796430 (tnpo1)
03009 Ribosome biogenesis [BR:
ctul03009
]
119796430 (tnpo1)
Messenger RNA biogenesis [BR:
ctul03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
119796430 (tnpo1)
Ribosome biogenesis [BR:
ctul03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
119796430 (tnpo1)
Pre-60S particles
119796430 (tnpo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
TPR_IMB1
HEAT_GCN1
HEAT_2
TOR1L1_N
Arm
Vac14_Fab1_bd
Cnd1
IBN_N
TPR_IPO5
TPR_DNAAF5
HEAT_EF3_N
HEAT_MROH2B_C
PDS5
Adaptin_N
MMS19_C
CEP104-like_TOG
HEAT_GCN1_C
HEAT_Maestro
UNC45-central
HEAT_DAAF5
Dopey_N
TPR_TTI1_C
VPS15-like_hel
DUF3689
Motif
Other DBs
NCBI-GeneID:
119796430
NCBI-ProteinID:
XP_038160884
LinkDB
All DBs
Position
Unknown
AA seq
890 aa
AA seq
DB search
MECEWKPDEQGLQQILQLLKESQSPDTSTQRSVQQRLEQLNQYPDFNNYLIFVLTKLKSE
DEPTRSLSGLILKNNVKAHYQNFPNGVSDFIKSECLQNIGDTSPLIRATVGILITTIASK
GELQNWPELLPKLCLLLDSEDYNTCEGAFGALQKICEDSAEILDSDMLDRPLNIMIPKFL
QFFKHNSPKIRSHAIACVNQFIISRTQALMLHIDPFIENLFALATDEEPEVRKNVCRALV
MLLEVRLDRLLPHMHNIIEYMLQRTRDPDENVALEACEFWLTLAEQPVCKEVLCGHLSQL
IPVLVNGMKYSEIDIILLKGDIEEDEAVPDNEQDIRPRFHRSRTVAQQHEGDGIEEDDDD
DDEMDDDDTISDWNLRKCSAAALDVLANVFRDDLLLHILPLLKELLFHPDWVVKESGILV
LGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQPPDVYLKP
LMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAFILDTLVFAFNKYQHKNLLI
LYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNQLKDEDKDLFPLLECLSSVATALQSG
FLPYCEPVYQRCVNLVQKTLAQAMLYQSQPDQYEAPDKDFMIVALDLLSGLAEGLGGTIE
QLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILGTNLNPE
LISVCNNATWAIGEISIQMGPEMQPYIAMVLHQLVEIINRPNTPKTLLENTAITIGRLGY
VCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPGGVVQDFIFFCDAVA
SWVNPKEDLREMFYKILHGFKNQVGEENWRHFSDQFPLPLKERLTTFYGV
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtgagtggaagccagacgagcaggggcttcagcaaatactacagctgctaaag
gagtctcagtcaccagacacgtccacgcagagatccgtccagcaaagactggagcagctg
aaccagtatccagacttcaacaactatctgatatttgttttgaccaaattaaaatctgaa
gatgaaccgacccgttccctgagtggactgattctgaagaacaatgtgaaggctcactat
cagaacttcccaaacggagtgtctgatttcatcaagagcgaatgcctccaaaacatcggg
gacacgtctcccctcattcgagccactgtgggtatcctcatcaccaccatcgcctccaaa
ggagagctgcaaaactggcctgagcttctgcctaaactctgcctgctgctggactctgag
gactataatacatgcgagggggcgttcggggctctgcagaagatctgcgaggactctgct
gagatcctggacagtgacatgctggatcggccactgaacattatgatacccaagttcttg
cagtttttcaaacacaacagcccaaaaattaggtctcatgccatcgcctgtgtgaaccag
ttcatcatcagcaggacccaggctctaatgcttcacattgacccgttcattgagaacctg
tttgctctggcgacagacgaggagccagaagtgaggaagaatgtttgccgagctctcgtc
atgctgcttgaggtccgcctggatcgtctcctgcctcacatgcacaacatcatagagtac
atgctccagaggactcgagacccagatgagaatgtcgccttggaggcctgtgagttctgg
ctgacgctggccgagcagccagtttgtaaagaagtgctgtgcggtcacctgtctcagctc
attcctgtacttgtcaacgggatgaagtactccgagatcgacattatcctgctcaaggga
gacatcgaggaagatgaagccgtcccagacaacgagcaagacatcagaccgcgctttcac
cgctctcgcacagtcgcccaacagcatgagggtgatgggattgaggaagacgatgatgac
gatgatgagatggatgacgacgatacgatttctgattggaacctgcgaaagtgctctgca
gcagccctggatgtgttagccaatgttttcagggatgatctcctgctgcacattcttcca
ctcctcaaagaactgcttttccatcccgactgggtagtgaaagagtcgggcatcctggtg
ctgggggctatagctgaaggttgcatgcagggcatgatcccatacctacctgagctcatc
ccacatctcatccagtgcttgtctgacaaaaaggcactggtgcgatccattacctgctgg
acactgagccgctatgcgcactgggtggtcagccagcccccggatgtttacctaaagcct
ctaatgaccgaactgctgaaacgcatactggatagtaacaagcgcgtgcaggaagctgcg
tgcagtgcctttgccaccctggaggaagaggcttgcacagagctggtaccttacctggca
ttcatcctggacacgctggtgtttgctttcaataagtaccagcacaaaaacctgctcatt
ctgtacgatgccatagggacgctcgcagattcagtgggacatcatcttaacaagccggaa
tacatccagatgctgatgccgcccctgatacagaaatggaaccagctcaaagatgaggac
aaagatctttttcctttattagaatgtttatcatctgtagccacagcccttcaaagtggc
tttcttccctattgtgagccggtttaccagcgatgcgtcaatctggtccagaagacactc
gcccaggctatgctttatcagtcacaacctgatcagtatgaggcgccagacaaagacttc
atgatcgtggctctggatcttctgagtggactggctgagggattgggtggcaccattgag
cagttggttgctcgcagcaacatcctgactctcatgtatcagtgcatgcaggacaaaatg
cctgaggtgcgtcagagctcttttgctctgcttggggatctcactaaggcctgttttcaa
catgtaaaaccctgcatcgctgattttatgcccatactgggtacaaatctgaacccagag
ttaatatctgtgtgcaacaatgcaacctgggcaattggagagatatccatacaaatgggg
cctgaaatgcagccatacattgccatggtgctgcaccagctggtggagatcattaacaga
cccaatactccaaagactctgctggaaaacacagcaataacaattggtcgtcttggttac
gtttgtcctcaagaggtggcacccatgctacagcagtttataagaccctggtgcacgtct
ctgcgaaatataagagacaatgaggagaaagactctgcattcagaggaatttgtacaatg
atcagtgtaaatccaggaggtgttgttcaggactttatattcttctgtgacgcagtggcc
tcctgggtaaacccaaaggaagatctcagagaaatgttctacaagatccttcacgggttc
aagaaccaggtgggcgaagagaactggaggcacttttcagatcagttcccgctgcctttg
aaggagcgactgactaccttttacggggtgtaa
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integrated database retrieval system
