Cyprinodon tularosa (White Sands pupfish): 119796486
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Entry
119796486 CDS
T07496
Name
(RefSeq) BRCA1-A complex subunit RAP80-like
KO
K20775
BRCA1-A complex subunit RAP80
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119796486
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctul03400
]
119796486
DNA repair and recombination proteins [BR:
ctul03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
119796486
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAP80_UIM
N_peptide
Motif
Other DBs
NCBI-GeneID:
119796486
NCBI-ProteinID:
XP_038161001
LinkDB
All DBs
Position
Unknown
AA seq
730 aa
AA seq
DB search
MRGRRGHSSSSSSVTRQQSRMALRKELIPDISVDNQQQDQSTEEVRASANSDSRDELPSL
LRSTSSAREKRRKERDSQVEQKEMTEEEMMDLALQLSKQEASNTALRQQREDEDVMKAIQ
ESMVSQKKPSLKSPNKSLLGAASTSLGSRRKLSYTNGEKLPQEGDMNSGDETITSSKKQK
RSTDSSLLEMPDLSQTQNLSCQNSLCSPESFSLNLDSPQSSDSTHIDDSQLQMSPVFPLT
GCKAEVHIKRLNGDLVETCKTSGFVMFSEDSIPSTQNSAQPKSPVFPQSNRVSSPKSPVF
LEDEEGHGGESEQSPKFVKSQIYGRTAEHETSPNASEPPACENEEFGFSSQESFIPTLRS
CPPQSPVFPKTPSDMLAINSDTDQEPAERGDECSVSPVFGSTEAQKTELQEKPGEVRGSE
HDQNIPDCRKDRKSNGFQTAECNRPLSESEVNGISEGCNSAEKEVTSDMTLVWSEEDDDD
ETPVVSPSPVFAEQEKVVPRVSQPGSSVNDVSEAGQKCSQQPCCTSGQELYPVSRQGVTR
ESPPPRESSGDQMIHYYWGVPFCPRGLDPDTYTQVIVAQMEVYEKSLKQVQRGLLRKAEW
GKAIQPEPEKSLSPEAPAESPQSGRPRRRGLRLRSSKRSKAPEFDEEEEKRDDDGEQEQQ
GKEEDEEQKDGDEEQMDTDDCEVCPETQLSDNDGTTELSLVTDHETQVSSLPKARKISVM
RLNLEVVTPY
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgagaggaagaagaggacactcttcatcgtcatcatcagtgactcgacagcagagcagg
atggctctgaggaaggagctgatcccggacatctctgttgacaaccagcaacaagatcaa
agcacagaggaggttagagcctctgccaactcggatagcagggatgagctcccatcttta
cttcgttcaacatcctcggcacgcgagaaacgacggaaggagagggatagccaagtcgaa
caaaaagagatgacggaggaggagatgatggacctggccttgcaactaagcaaacaggaa
gccagcaatacagcactgagacagcagcgggaggatgaggatgtgatgaaagccattcag
gagagtatggtaagccagaaaaaaccttctctgaaatctccaaataaatcgctgcttggt
gccgcctccacaagtttaggctctcgccgaaaactctcatacaccaatggagagaagctg
ccacaagagggcgacatgaactcaggagatgaaactattaccagtagtaaaaagcagaaa
agaagtacagatagttctctgcttgagatgccagatttgtctcagactcagaacctttcc
tgccagaattcgctctgcagccctgaatcgttctcactcaatctggactctccacagagc
tcagactcaactcatatagatgactcccagctccagatgtctccagtctttccactgacc
ggctgcaaagccgaggtccacatcaagcggttaaacggggatctagtagaaacatgtaaa
acctctgggtttgtcatgttttctgaggacagtattccttcgactcaaaattctgctcag
cccaaaagcccagtatttccacagagtaacagagtatctagtcccaaaagtcctgtgttc
ttagaagatgaagagggacatggaggagagtcagagcagagccccaagtttgttaaaagt
caaatttatggcaggactgcagagcatgagacgtctcctaatgcctctgaaccccctgcg
tgtgaaaacgaggagtttggcttctcctctcaggagagttttatccccactttaaggtct
tgccctccccagagccctgttttccctaaaactccctcggatatgttagcaatcaattca
gacactgatcaagaacctgctgaacggggagatgaatgctcagtgagcccagtgtttgga
tcgacggaagcacagaagactgagctgcaggaaaaaccaggagaggttcgaggttctgag
catgatcagaatatccccgattgcaggaaggacagaaagtctaatggctttcaaacagct
gagtgcaacagacctttatctgagtcagaagtgaatggaatatccgaaggctgtaattct
gctgagaaagaggtgacaagcgatatgacattggtctggtcagaagaggatgacgatgat
gaaacgccagttgtctctcctagccccgtgtttgctgagcaggagaaagttgttccaaga
gtgagccagcctggatcctccgtgaatgacgtgtcagaggctgggcaaaagtgcagccag
cagccatgttgcacctcagggcaggagctctatcctgtgagcagacagggagtcaccagg
gagtcaccaccacctagagaatcatcaggcgaccagatgattcactactactggggggtt
cccttctgtccaagaggcctggacccagacacatacacccaggtgatcgtggctcagatg
gaggtttatgagaagagtttgaaacaagttcaaaggggcctactgaggaaggctgagtgg
gggaaggctatccagccagagccagagaagtcactgtcccctgaagcacctgctgaatca
ccccagtctggtcgtcctcggaggagaggcctcagactgagaagcagcaaaaggagcaaa
gcccctgaatttgacgaggaagaagagaagagagatgatgatggagaacaggaacagcaa
ggaaaggaggaggatgaggagcagaaggacggcgatgaagaacagatggatactgacgac
tgtgaggtttgtccagaaactcaactgagcgacaacgacggcacgacagagctttccttg
gtgaccgaccatgaaacacaggtcagctccctgccaaaagctagaaaaatatcagtaatg
aggttaaatttggaggtagtgactccttactag
DBGET
integrated database retrieval system
