Cyprinodon tularosa (White Sands pupfish): 119796645
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Entry
119796645 CDS
T07496
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119796645
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ctul04812
]
119796645
Cytoskeleton proteins [BR:
ctul04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
119796645
Intermediate filaments
Intermediate filament-binding proteins
119796645
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SLATT_6
TMP_3
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
119796645
NCBI-ProteinID:
XP_038161208
LinkDB
All DBs
Position
Unknown
AA seq
2692 aa
AA seq
DB search
MANASPDLDNAEAQRQLNNNNRPISSGFWETECTSSKLFECSRIKALADERDAVQKKTFT
KWVNSHLARVSCRISDLYNDLRDGYMLTRLLEVLSGELLPRPTRGRMRIHCLENVDKALQ
FLKEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQVIKINTADNRETRSAKDALLL
WCQMKTAGYPEVNIQNFTTCWRDGLAFNALIHRHRPDLIEFHKLTRSNATHNLQQAFNVA
ENHLGLTKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALIVEGKRVGKVLDNCIETE
SIVNRYDALASDLLDWIEKTIAIISNQKFANSLTGVQQQLQAFTTYCTIEKPIKFQEKGN
LEVLLFTIQSKLRANNQKPYVPHDGKLISDINKAWERLEKAEHERGMALRKELIRQEKLE
LLAQRFDHKTTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADIASYEERIGVV
IELSSEMEKEGYYDIRRILARKENILGQWSLLKELVAGRRTRLEKNLALQKTFQDMVYMI
DWMEETQAQLLSKDFGKHLLEVDDLLQKHSLQEADISVQAERVEMLNAAALKFTTIEGYQ
PCDPQVICNRVNHVSTCVEELKQLAAKRRAELEESRQLWAFFQELEESEAWIREKSSILA
SQGYGKDLSSVLRLLQKHKTLAGELLAHRSLLQNTIKQGKQILSEKSFGTTGIQERIMEV
KDVWKRLEDQAAQHLNHLQEALNFFQFSTETDDLAAWLQDAYRLVSSEDFGHDEYSTQSL
LKKHKGVTEAIDKHRLHVVALRKHMMVLPLQYQEQEEVQVRLGDVEQLYAEVAEVAVLRQ
QWLHDALAVYRMFSEVNACELWIDEKEQWLEKMEIPEKLEDVEVVAHRFESLDQEMNSLM
GRILDVNQIVQQLLDGGHPSSAEVRGCQDHLNSRWNSIVELVEQKKDQLNSMLRLQNYLL
ECAEIKSQIQDKRKAIDATQYMGSDLGGVLALQRRLSTMEGALSVLEPKLLHLQEEAEYL
ATAHPSRTMEILVPFDGISVEWEELKRTLQGCEDSLMVASRLQSFIQDLDSFLTWLVQTQ
TAAASDQLPNDLEEAEKLINKHAALKEEIGRYEEDYERLQAMNELLESEDAPLPQAALQQ
WLQKLDVGWNKLLEMWESRREVLVQAHIFHLFLRDVKQAESFLNNQESALAHVELPTTVE
TVEGAIKKHKDFTTTMELNLHRIKAVIEAGESLISQNNIYSERIRERIDTLASRGNKNRE
LAQRWLEKLNDQWELQRFLQDCHELGDWVYEKMLMARDSSRDETQKLHKKWQKHQAFMAE
LAQNKEWLDKIEKEGQQLIKEKPELSPVVRKKLEEIRDCWLDLESTTQAKARQLFEANKA
DLLVQSYESLDQRLGQLECQLSYVDQGQDLTTVNKQLKKLHTMESQMEQWYKEVGQLQVQ
AASIPQQTQIQGTVVERQAAVETRMARLIEPLKERRRLLLASKDVHQVGRDLEDEILWFQ
ERLPLAMSQEHGSSLQAVQQLMKKNQTLQRELEGHRSRIEDVLERAGIIASIRSPEADCV
RAGHDQLAQLWALLWAETERRQLVLDAMYQAQQYYFDTAEVEAWLSEQELHMMNEEKGKD
EPSTLQLLKKHLLLEQTIEDYAETIGLLSQQCRQLLEMGHPDSEQISKRQSQIDRLYVSL
KDLVEERKSRLEQQYWLYQLNREVDELEQWIAQREVVASSPELGQDFEHVSVLQEKFTEF
ASETGSVGQERVTAVNQMVDELIDYGHSEAATIAEWKDGVNEAWADLLELMETRAQMLAA
SHQLHKFFSDCKEILAQIEDKHRRLPEVRARQGSTSNTSTLQRLLQNFEQDIQLLVTQVR
QLQESAAQLRTVYAGEKAEAIACREHEVMLCWKELLTSCEECRLQITTETDKLRFFSMVR
DQIMWMESIICQIGTGEKPRDVSSVEVLMNYHQSLKSEVEARSQSTLECIEMGKMLLAAR
NPAAEEIKEKLEKVISKQRELLEKWDKHWEVLQQLLEVHQFAQEAMVVEAWLTAQEPLIN
SKELGGSVDEVEQLIRRHEAFRKAAATWEERFSSLRRLTTVEKLKAEQSKLPPTPLLGRK
VFLDPQDASSVPTTLPRLPVSPVMRQTIYEQNEASSPPSPSPATPTPSPSAAARRLGSTV
ANYTPVMNGSSYRHNLEARHGGVVGVAAGLGQPAPSSIASVATAAMLVSANQMRESTSTA
KDQATKTMSYLQPGQAGKELEVKSLPYLRQPKIKHLDDAVTPLIVASRLERGRERGRERE
RGGGMATERAEVAVMAEVVLQEPGREGLHSEPTRGPRGSRTDPLGHAEPQVQTYQRQLSS
EQLIQARRDELPQEVWREQAERRRTLERQTSSEQEGHDGRRRERDRHRGERQESSDDMGR
EQSDRRSTGGEKRTTMAEIVEQLQEREAAQARGEVPRLPNGIPEKSSRLDRPRARDRPKP
RRRPRPKEPGETTRRSRSAPAQSSQTAPQPPTHTAHHEGFLFRKLDIESMKKSTNSRSWV
NLYCVLNKGELGFYKDAKNTTTSYNNEPLLNLSHCHCDVTNGYKKKKNVFTLKTKDGSEF
LFHAKDEEDLKAWVNNITASISEHEEIAKWGQPQPTTSSTDEGTRRDGSKVDNRSDRGGE
RSDRGDRIERADKEKEREKEKEKERERGERSEKSERAGKSDGKRSEKSSKKK
NT seq
8079 nt
NT seq
+upstream
nt +downstream
nt
atggctaatgcctctccagacctggacaatgcagaagctcagcgccagctcaataacaac
aaccgaccaatcagctctgggttctgggagactgagtgtacaagctccaaattgtttgag
tgttcccgcatcaaggctctggcagatgaaagagatgcagtgcagaaaaaaaccttcaca
aagtgggtcaactcccacctagccagagtgtcctgtcgaatatctgacctctacaacgac
ctgagggatggctatatgctcaccagactgctggaggttcttagtggggagctcctgccg
agaccgactaggggtcgtatgcggatccactgcctggagaatgtcgacaaagcgttgcag
ttcctgaaggagcagagggttcatctagaaaatgttggttcccatgacatagtagatgga
aaccatcgcctcacgctgggccttatctggactatcatcctccgttttcagatccaggtg
atcaaaataaacactgcagacaacagagaaacccgctcggccaaagacgctctgctgctt
tggtgccagatgaagactgcaggataccctgaggtgaacattcagaatttcaccacctgc
tggagagatggcctcgccttcaacgccctcatacacagacacagacctgacctaatagag
ttccataagctgacgcgctccaatgcaacccacaacctgcagcaagcctttaacgtcgcc
gagaaccacctgggtctcaccaaactcctggaccctgaggatgtgaacacagagaaccca
gatgaaaagtccatcattacgtatgtggtctcctactaccactacttctccaagatgaag
gctcttattgtggaggggaagagggttggcaaggtgttggacaactgcatcgagactgaa
tcgatcgtgaaccgatatgacgctctggcctcagacctgctggactggatagagaagacc
attgccattatcagcaaccagaaatttgccaactcgctgactggagttcagcagcagctg
caggctttcacaacctactgcactatagagaagcccatcaagtttcaggagaaaggaaat
cttgaggtccttctgttcaccatccaaagcaaactcagagccaataaccagaaaccctac
gtgcctcatgatgggaagctgatctcagacatcaacaaggcctgggaaagactggagaag
gcggagcatgagagaggcatggctctacgcaaagagctgattcgtcaggagaagctggag
cttttggctcagcgttttgaccacaaaacaaccatgaggcaagcgtggctcaacgagaac
cagagactcgtgtcgcaggataattttggctacgatctgcctgcagtcgaggctgcgatg
aagaaacacgaggccatcgaggcggacatagcctcttacgaagaaaggatcggtgtggtt
attgagctctcctcagagatggaaaaggaaggatactacgacatccgacgcatcctggca
cgcaaggagaacatcctgggccagtggagtctcctaaaggagctggtggctggaaggagg
acccgcctggagaagaacctggctttgcagaagacctttcaggacatggtctacatgatc
gactggatggaggaaacgcaggctcagctgctgtcaaaggactttggaaaacatcttctg
gaggtagacgacttgctgcagaagcacagcctgcaggaagctgatatttcagtgcaggct
gagagagtggagatgctcaatgctgctgcactcaaattcaccacaatagaaggctaccag
ccatgtgacccacaggtgatctgtaaccgtgtgaaccacgtctctacctgtgtggaagaa
ctgaaacagctggcggctaaacggcgggctgagcttgaggagtcgagacagctgtgggcc
ttttttcaggagctggaggagtcggaggcctggattcgggagaaaagctccatcctggcc
tctcagggatatgggaaagatctgagcagtgtgctgaggttacttcagaaacacaagact
ctagccggggagctgctggctcatcgctctctgctgcagaacaccataaaacaaggaaag
cagattctaagtgaaaagagctttggcaccactgggatccaggagcgcatcatggaggta
aaagacgtgtggaaaaggctggaggaccaggctgcgcagcatctcaaccacttgcaggaa
gcgctcaacttcttccagttctccacggagacagacgacctggcggcctggctgcaggac
gcctaccgtctcgtctccagcgaggactttggtcacgatgagtactccactcagtctttg
ctgaagaaacacaaaggggtcacagaggctatcgataaacacagactacatgttgttgcg
ctgcggaaacacatgatggtgctgcctctgcaataccaagaacaggaggaggtgcaggtg
cgtttgggcgacgtggagcagctatatgccgaggttgctgaagtcgccgtgctccggcag
cagtggcttcacgatgcgctggctgtgtaccgcatgttcagcgaggtcaatgcctgtgag
ctctggatcgatgagaaggagcagtggctggagaagatggaaatccctgaaaagctggag
gacgtggaagtggtggcacacaggtttgaaagcttggaccaggagatgaacagcctgatg
ggacggatcctggatgttaatcagatagtacagcagctcctggatggaggtcatccttct
tctgcggaggtcagaggttgtcaggatcatctcaactccaggtggaacagcatcgtagag
ctggtggagcagaagaaagaccagctgaactcaatgttacggctgcagaattacctactg
gagtgtgctgagatcaaatcccagatccaggacaagaggaaagccattgatgccacacag
tacatgggcagcgatttgggaggggtccttgctctgcagagacgcctttctaccatggag
ggagccctgtctgtcttggagcccaaactgctacatctacaggaggaagcagagtatctg
gccactgctcatccaagtcgaaccatggaaatccttgtgccgttcgatggcatcagcgtg
gaatgggaggagcttaagaggaccctgcagggatgtgaagactcactgatggtggctagc
aggctccagagcttcatacaggatctggactccttcctaacctggctggtccagacccag
acggctgctgcctctgatcaacttcccaacgacttggaagaggcagaaaaactcatcaac
aaacatgctgctctcaaagaggagatcggacggtatgaggaagactatgagcgtctccaa
gccatgaacgagcttctagagtcagaagatgcacctctgcctcaggcggccctgcagcag
tggctccagaagcttgatgttggctggaacaagctcctcgaaatgtgggagagcaggagg
gaagttctggtccaagctcatatttttcacctgttcctacgagatgtcaaacaagcagag
tccttcttaaacaaccaggaatcggctctcgctcacgtggagcttcccaccaccgtagaa
acagtcgaaggtgctataaagaaacacaaggactttaccaccacaatggagctgaacctg
cacaggatcaaagctgtgattgaggcaggagaaagcctgatcagtcagaacaacatctac
tccgagcgcatcagggaacgtatcgacaccctcgccagcaggggaaacaagaacagggag
cttgcccagcggtggctggaaaaactgaatgaccaatgggaacttcaaagatttctccaa
gactgtcatgagctgggggactgggtgtacgagaagatgctgatggcgagggacagcagt
cgcgacgagacccaaaagcttcataagaaatggcagaagcaccaggcttttatggccgag
ctggcccagaacaaggaatggctggataagatcgaaaaggaaggccagcagctgattaag
gagaagccggagctgagccccgtggtccggaagaagctggaggagatcagggattgctgg
ctagatttggagagcaccacccaggccaaagcccgccagctcttcgaggccaacaaggcg
gacctgctggtgcagagttatgaaagcctcgaccagaggctgggccagctggagtgtcag
ctgtcctacgtggaccagggacaggacctcaccaccgtcaacaaacagctcaagaaactc
cataccatggagtcccagatggagcagtggtataaggaggtgggtcagctgcaggttcag
gcggcttccatcccgcagcagacgcagatccaaggcacggtggtggagcgacaagctgct
gtagagaccaggatggcccgactgatcgagccattgaaggagagacggaggcttcttctg
gcatctaaggacgttcatcaagtcgggcgagacctggaggatgagattttatggttccag
gagcgcctccctctggccatgtcccaggaacacggctcatcacttcaagccgtccagcag
ctcatgaagaagaaccagacacttcaaagagagctggagggacacaggagcagaatcgaa
gatgtcctggagagggcagggatcattgcctccattaggagcccagaggctgactgcgtc
agagcaggtcatgaccagctggcccagctgtgggctctgctgtgggctgagacagagagg
aggcagctggtactggacgccatgtatcaagcccagcagtattactttgacacagctgag
gtcgaggcctggttaagtgagcaggagctgcacatgatgaatgaggagaagggaaaggat
gagccgagcacgctgcagttgctgaagaaacatttgctcctggagcaaaccatcgaggac
tacgctgagaccattggcctgctgtcacagcagtgtcgacaattgctagagatgggacat
ccagacagcgaacagatcagcaagcgtcagtcgcagatagaccgactgtacgtgtccctg
aaggacctggtggaggagagaaagagccgcctggagcagcagtactggctgtatcagctc
aacagggaggtggacgagctggagcagtggatcgcccagagggaagtggtcgccagctcg
ccagaactgggccaagactttgagcatgtctccgttctccaagaaaagtttacagagttt
gcctcggagacgggaagtgtggggcaggaacgtgtgacggccgtcaaccagatggtggac
gagctcatagactacggtcactctgaggccgccaccatcgctgaatggaaggacggggtt
aatgaagcctgggccgacctgctggagctgatggagaccagagcgcagatgctcgctgcg
tcacaccagctgcataagttcttctcagactgcaaagagattttggctcagatagaagac
aagcaccgcagactaccagaagttcgggctcggcaggggagcacctccaacaccagcacc
ctgcagagactcctgcaaaacttcgaacaggacatccagctgctggtcactcaggtgcgt
cagctgcaggagagtgcggcccagctgagaacggtgtatgcaggagagaaggccgaagcc
atcgcctgtcgggagcacgaagtgatgctgtgctggaaagagctgctgacatcatgcgaa
gagtgtcgactgcagatcaccaccgagacggacaagctgaggttcttcagcatggtccgg
gatcagatcatgtggatggagtcaatcatctgccagataggcacaggagaaaagccaagg
gacgtgtcatcggtggaggtgctgatgaattatcaccaaagccttaagagtgaagtggag
gcccgcagccagagcaccctggagtgtatcgaaatgggaaaaatgctgctggctgctaga
aaccctgctgctgaggagattaaagaaaagctggaaaaggtgatttccaagcagcgggag
cttttggagaagtgggacaagcactgggaggttttacagcaattgttggaggtccatcag
tttgcccaggaggcaatggtggtggaggcctggctgaccgctcaggagccgctgatcaat
agcaaggagctgggagggagcgtggacgaggtggagcagctcatacgccgacacgaagcc
ttcaggaaagcagccgccacctgggaggagagattcagctccctgcgacgcctcactacg
gtggaaaagttgaaagcagaacagagcaaattgcccccaacaccccttctggggcgtaaa
gtcttcctggacccacaagatgcatcctccgttccaacaaccctcccccgccttccagtc
tcccccgtcatgagacagaccatctacgagcagaatgaggccagctctcctccatctcct
tcgcctgccaccccaacgccctccccatcagctgcggctcgccggctggggtccacggtc
gccaactacacccccgtgatgaacggatccagctacagacacaacctggaggcgcggcac
ggtggagtggtgggtgtggcagctggactaggtcagccagctccctcgtcgattgcatct
gttgccacggcggcaatgttggtgtcggccaatcagatgcgagaaagtaccagcactgca
aaagatcaggccaccaaaaccatgagttacttacagccggggcaggcgggaaaggagctt
gaggtgaaatccttgccgtatctacggcaacccaaaatcaaacacttggacgatgctgtg
acgcctttgattgtggctagccgactggagagaggcagagagaggggtagagaacgggaa
cgaggggggggaatggcaacagagcgagcagaggtggcggtgatggctgaggtggtgctc
caggagccgggtcgagagggtctgcacagcgagcccaccagggggccgcggggatccagg
accgaccccctgggtcacgcagaacctcaggtccagacgtatcagcggcagctctccagt
gagcagctgatccaggcgcgcagagatgagctacctcaggaggtgtggagagaacaagca
gagaggaggcggacgctggagaggcaaacctccagtgaacaggagggccatgacggccgg
cggagagaaagggaccggcaccgaggggagagacaggagtccagtgatgacatgggcagg
gagcaatcagacagacgctctacaggaggagagaagagaaccaccatggcagagatagta
gagcagcttcaagaaagagaagcagcacaggctcgtggtgaggttccccgcctgcccaac
ggtataccagaaaagtcttcccgtcttgaccggcccagagccagggacagacccaaacca
agacgaaggcctcgtcccaaagagccaggagagacaacgcggaggtccagatctgctcca
gctcagagcagccagacggccccccaaccaccaacccatacagcacaccatgagggcttc
cttttccgcaagctggacatcgagagcatgaagaaaagcaccaatagcaggtcttgggtc
aacctttactgcgtgctgaacaaaggggagctgggtttctacaaggatgccaagaacact
accacgtcctacaacaacgagcccctgctcaacctctcccactgccactgcgacgtcacc
aacggctacaagaagaagaagaacgtcttcactctgaaaacgaaggatggcagtgaattt
ttgtttcatgcaaaggatgaggaggacctcaaagcatgggtgaacaacatcaccgccagt
atttcagagcacgaggagattgccaaatggggtcagccccaaccaactacctcatccacg
gacgaagggacacggcgagacggcagcaaagtggacaacaggtcggatagaggcggcgag
cgctccgatcgtggagaccggatagagcgggcggacaaggaaaaggaaagggaaaaggag
aaagagaaggagagggagagaggagagcggtcggagaaatcagaacgggcgggaaagtca
gacggaaaacgctccgagaagtcaagcaagaagaaatga
DBGET
integrated database retrieval system
