Cyprinodon tularosa (White Sands pupfish): 119796645
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Entry
119796645 CDS
T07496
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04517
IgSF CAM signaling
ctul04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
119796645
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119796645
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ctul04812
]
119796645
Cytoskeleton proteins [BR:
ctul04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
119796645
Intermediate filaments
Intermediate filament-binding proteins
119796645
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_4
TMP_3
SOS1_NGEF_PH
Helical_needle
Motif
Other DBs
NCBI-GeneID:
119796645
NCBI-ProteinID:
XP_038161208
LinkDB
All DBs
Position
Unknown
AA seq
2692 aa
AA seq
DB search
MANASPDLDNAEAQRQLNNNNRPISSGFWETECTSSKLFECSRIKALADERDAVQKKTFT
KWVNSHLARVSCRISDLYNDLRDGYMLTRLLEVLSGELLPRPTRGRMRIHCLENVDKALQ
FLKEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQVIKINTADNRETRSAKDALLL
WCQMKTAGYPEVNIQNFTTCWRDGLAFNALIHRHRPDLIEFHKLTRSNATHNLQQAFNVA
ENHLGLTKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALIVEGKRVGKVLDNCIETE
SIVNRYDALASDLLDWIEKTIAIISNQKFANSLTGVQQQLQAFTTYCTIEKPIKFQEKGN
LEVLLFTIQSKLRANNQKPYVPHDGKLISDINKAWERLEKAEHERGMALRKELIRQEKLE
LLAQRFDHKTTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADIASYEERIGVV
IELSSEMEKEGYYDIRRILARKENILGQWSLLKELVAGRRTRLEKNLALQKTFQDMVYMI
DWMEETQAQLLSKDFGKHLLEVDDLLQKHSLQEADISVQAERVEMLNAAALKFTTIEGYQ
PCDPQVICNRVNHVSTCVEELKQLAAKRRAELEESRQLWAFFQELEESEAWIREKSSILA
SQGYGKDLSSVLRLLQKHKTLAGELLAHRSLLQNTIKQGKQILSEKSFGTTGIQERIMEV
KDVWKRLEDQAAQHLNHLQEALNFFQFSTETDDLAAWLQDAYRLVSSEDFGHDEYSTQSL
LKKHKGVTEAIDKHRLHVVALRKHMMVLPLQYQEQEEVQVRLGDVEQLYAEVAEVAVLRQ
QWLHDALAVYRMFSEVNACELWIDEKEQWLEKMEIPEKLEDVEVVAHRFESLDQEMNSLM
GRILDVNQIVQQLLDGGHPSSAEVRGCQDHLNSRWNSIVELVEQKKDQLNSMLRLQNYLL
ECAEIKSQIQDKRKAIDATQYMGSDLGGVLALQRRLSTMEGALSVLEPKLLHLQEEAEYL
ATAHPSRTMEILVPFDGISVEWEELKRTLQGCEDSLMVASRLQSFIQDLDSFLTWLVQTQ
TAAASDQLPNDLEEAEKLINKHAALKEEIGRYEEDYERLQAMNELLESEDAPLPQAALQQ
WLQKLDVGWNKLLEMWESRREVLVQAHIFHLFLRDVKQAESFLNNQESALAHVELPTTVE
TVEGAIKKHKDFTTTMELNLHRIKAVIEAGESLISQNNIYSERIRERIDTLASRGNKNRE
LAQRWLEKLNDQWELQRFLQDCHELGDWVYEKMLMARDSSRDETQKLHKKWQKHQAFMAE
LAQNKEWLDKIEKEGQQLIKEKPELSPVVRKKLEEIRDCWLDLESTTQAKARQLFEANKA
DLLVQSYESLDQRLGQLECQLSYVDQGQDLTTVNKQLKKLHTMESQMEQWYKEVGQLQVQ
AASIPQQTQIQGTVVERQAAVETRMARLIEPLKERRRLLLASKDVHQVGRDLEDEILWFQ
ERLPLAMSQEHGSSLQAVQQLMKKNQTLQRELEGHRSRIEDVLERAGIIASIRSPEADCV
RAGHDQLAQLWALLWAETERRQLVLDAMYQAQQYYFDTAEVEAWLSEQELHMMNEEKGKD
EPSTLQLLKKHLLLEQTIEDYAETIGLLSQQCRQLLEMGHPDSEQISKRQSQIDRLYVSL
KDLVEERKSRLEQQYWLYQLNREVDELEQWIAQREVVASSPELGQDFEHVSVLQEKFTEF
ASETGSVGQERVTAVNQMVDELIDYGHSEAATIAEWKDGVNEAWADLLELMETRAQMLAA
SHQLHKFFSDCKEILAQIEDKHRRLPEVRARQGSTSNTSTLQRLLQNFEQDIQLLVTQVR
QLQESAAQLRTVYAGEKAEAIACREHEVMLCWKELLTSCEECRLQITTETDKLRFFSMVR
DQIMWMESIICQIGTGEKPRDVSSVEVLMNYHQSLKSEVEARSQSTLECIEMGKMLLAAR
NPAAEEIKEKLEKVISKQRELLEKWDKHWEVLQQLLEVHQFAQEAMVVEAWLTAQEPLIN
SKELGGSVDEVEQLIRRHEAFRKAAATWEERFSSLRRLTTVEKLKAEQSKLPPTPLLGRK
VFLDPQDASSVPTTLPRLPVSPVMRQTIYEQNEASSPPSPSPATPTPSPSAAARRLGSTV
ANYTPVMNGSSYRHNLEARHGGVVGVAAGLGQPAPSSIASVATAAMLVSANQMRESTSTA
KDQATKTMSYLQPGQAGKELEVKSLPYLRQPKIKHLDDAVTPLIVASRLERGRERGRERE
RGGGMATERAEVAVMAEVVLQEPGREGLHSEPTRGPRGSRTDPLGHAEPQVQTYQRQLSS
EQLIQARRDELPQEVWREQAERRRTLERQTSSEQEGHDGRRRERDRHRGERQESSDDMGR
EQSDRRSTGGEKRTTMAEIVEQLQEREAAQARGEVPRLPNGIPEKSSRLDRPRARDRPKP
RRRPRPKEPGETTRRSRSAPAQSSQTAPQPPTHTAHHEGFLFRKLDIESMKKSTNSRSWV
NLYCVLNKGELGFYKDAKNTTTSYNNEPLLNLSHCHCDVTNGYKKKKNVFTLKTKDGSEF
LFHAKDEEDLKAWVNNITASISEHEEIAKWGQPQPTTSSTDEGTRRDGSKVDNRSDRGGE
RSDRGDRIERADKEKEREKEKEKERERGERSEKSERAGKSDGKRSEKSSKKK
NT seq
8079 nt
NT seq
+upstream
nt +downstream
nt
atggctaatgcctctccagacctggacaatgcagaagctcagcgccagctcaataacaac
aaccgaccaatcagctctgggttctgggagactgagtgtacaagctccaaattgtttgag
tgttcccgcatcaaggctctggcagatgaaagagatgcagtgcagaaaaaaaccttcaca
aagtgggtcaactcccacctagccagagtgtcctgtcgaatatctgacctctacaacgac
ctgagggatggctatatgctcaccagactgctggaggttcttagtggggagctcctgccg
agaccgactaggggtcgtatgcggatccactgcctggagaatgtcgacaaagcgttgcag
ttcctgaaggagcagagggttcatctagaaaatgttggttcccatgacatagtagatgga
aaccatcgcctcacgctgggccttatctggactatcatcctccgttttcagatccaggtg
atcaaaataaacactgcagacaacagagaaacccgctcggccaaagacgctctgctgctt
tggtgccagatgaagactgcaggataccctgaggtgaacattcagaatttcaccacctgc
tggagagatggcctcgccttcaacgccctcatacacagacacagacctgacctaatagag
ttccataagctgacgcgctccaatgcaacccacaacctgcagcaagcctttaacgtcgcc
gagaaccacctgggtctcaccaaactcctggaccctgaggatgtgaacacagagaaccca
gatgaaaagtccatcattacgtatgtggtctcctactaccactacttctccaagatgaag
gctcttattgtggaggggaagagggttggcaaggtgttggacaactgcatcgagactgaa
tcgatcgtgaaccgatatgacgctctggcctcagacctgctggactggatagagaagacc
attgccattatcagcaaccagaaatttgccaactcgctgactggagttcagcagcagctg
caggctttcacaacctactgcactatagagaagcccatcaagtttcaggagaaaggaaat
cttgaggtccttctgttcaccatccaaagcaaactcagagccaataaccagaaaccctac
gtgcctcatgatgggaagctgatctcagacatcaacaaggcctgggaaagactggagaag
gcggagcatgagagaggcatggctctacgcaaagagctgattcgtcaggagaagctggag
cttttggctcagcgttttgaccacaaaacaaccatgaggcaagcgtggctcaacgagaac
cagagactcgtgtcgcaggataattttggctacgatctgcctgcagtcgaggctgcgatg
aagaaacacgaggccatcgaggcggacatagcctcttacgaagaaaggatcggtgtggtt
attgagctctcctcagagatggaaaaggaaggatactacgacatccgacgcatcctggca
cgcaaggagaacatcctgggccagtggagtctcctaaaggagctggtggctggaaggagg
acccgcctggagaagaacctggctttgcagaagacctttcaggacatggtctacatgatc
gactggatggaggaaacgcaggctcagctgctgtcaaaggactttggaaaacatcttctg
gaggtagacgacttgctgcagaagcacagcctgcaggaagctgatatttcagtgcaggct
gagagagtggagatgctcaatgctgctgcactcaaattcaccacaatagaaggctaccag
ccatgtgacccacaggtgatctgtaaccgtgtgaaccacgtctctacctgtgtggaagaa
ctgaaacagctggcggctaaacggcgggctgagcttgaggagtcgagacagctgtgggcc
ttttttcaggagctggaggagtcggaggcctggattcgggagaaaagctccatcctggcc
tctcagggatatgggaaagatctgagcagtgtgctgaggttacttcagaaacacaagact
ctagccggggagctgctggctcatcgctctctgctgcagaacaccataaaacaaggaaag
cagattctaagtgaaaagagctttggcaccactgggatccaggagcgcatcatggaggta
aaagacgtgtggaaaaggctggaggaccaggctgcgcagcatctcaaccacttgcaggaa
gcgctcaacttcttccagttctccacggagacagacgacctggcggcctggctgcaggac
gcctaccgtctcgtctccagcgaggactttggtcacgatgagtactccactcagtctttg
ctgaagaaacacaaaggggtcacagaggctatcgataaacacagactacatgttgttgcg
ctgcggaaacacatgatggtgctgcctctgcaataccaagaacaggaggaggtgcaggtg
cgtttgggcgacgtggagcagctatatgccgaggttgctgaagtcgccgtgctccggcag
cagtggcttcacgatgcgctggctgtgtaccgcatgttcagcgaggtcaatgcctgtgag
ctctggatcgatgagaaggagcagtggctggagaagatggaaatccctgaaaagctggag
gacgtggaagtggtggcacacaggtttgaaagcttggaccaggagatgaacagcctgatg
ggacggatcctggatgttaatcagatagtacagcagctcctggatggaggtcatccttct
tctgcggaggtcagaggttgtcaggatcatctcaactccaggtggaacagcatcgtagag
ctggtggagcagaagaaagaccagctgaactcaatgttacggctgcagaattacctactg
gagtgtgctgagatcaaatcccagatccaggacaagaggaaagccattgatgccacacag
tacatgggcagcgatttgggaggggtccttgctctgcagagacgcctttctaccatggag
ggagccctgtctgtcttggagcccaaactgctacatctacaggaggaagcagagtatctg
gccactgctcatccaagtcgaaccatggaaatccttgtgccgttcgatggcatcagcgtg
gaatgggaggagcttaagaggaccctgcagggatgtgaagactcactgatggtggctagc
aggctccagagcttcatacaggatctggactccttcctaacctggctggtccagacccag
acggctgctgcctctgatcaacttcccaacgacttggaagaggcagaaaaactcatcaac
aaacatgctgctctcaaagaggagatcggacggtatgaggaagactatgagcgtctccaa
gccatgaacgagcttctagagtcagaagatgcacctctgcctcaggcggccctgcagcag
tggctccagaagcttgatgttggctggaacaagctcctcgaaatgtgggagagcaggagg
gaagttctggtccaagctcatatttttcacctgttcctacgagatgtcaaacaagcagag
tccttcttaaacaaccaggaatcggctctcgctcacgtggagcttcccaccaccgtagaa
acagtcgaaggtgctataaagaaacacaaggactttaccaccacaatggagctgaacctg
cacaggatcaaagctgtgattgaggcaggagaaagcctgatcagtcagaacaacatctac
tccgagcgcatcagggaacgtatcgacaccctcgccagcaggggaaacaagaacagggag
cttgcccagcggtggctggaaaaactgaatgaccaatgggaacttcaaagatttctccaa
gactgtcatgagctgggggactgggtgtacgagaagatgctgatggcgagggacagcagt
cgcgacgagacccaaaagcttcataagaaatggcagaagcaccaggcttttatggccgag
ctggcccagaacaaggaatggctggataagatcgaaaaggaaggccagcagctgattaag
gagaagccggagctgagccccgtggtccggaagaagctggaggagatcagggattgctgg
ctagatttggagagcaccacccaggccaaagcccgccagctcttcgaggccaacaaggcg
gacctgctggtgcagagttatgaaagcctcgaccagaggctgggccagctggagtgtcag
ctgtcctacgtggaccagggacaggacctcaccaccgtcaacaaacagctcaagaaactc
cataccatggagtcccagatggagcagtggtataaggaggtgggtcagctgcaggttcag
gcggcttccatcccgcagcagacgcagatccaaggcacggtggtggagcgacaagctgct
gtagagaccaggatggcccgactgatcgagccattgaaggagagacggaggcttcttctg
gcatctaaggacgttcatcaagtcgggcgagacctggaggatgagattttatggttccag
gagcgcctccctctggccatgtcccaggaacacggctcatcacttcaagccgtccagcag
ctcatgaagaagaaccagacacttcaaagagagctggagggacacaggagcagaatcgaa
gatgtcctggagagggcagggatcattgcctccattaggagcccagaggctgactgcgtc
agagcaggtcatgaccagctggcccagctgtgggctctgctgtgggctgagacagagagg
aggcagctggtactggacgccatgtatcaagcccagcagtattactttgacacagctgag
gtcgaggcctggttaagtgagcaggagctgcacatgatgaatgaggagaagggaaaggat
gagccgagcacgctgcagttgctgaagaaacatttgctcctggagcaaaccatcgaggac
tacgctgagaccattggcctgctgtcacagcagtgtcgacaattgctagagatgggacat
ccagacagcgaacagatcagcaagcgtcagtcgcagatagaccgactgtacgtgtccctg
aaggacctggtggaggagagaaagagccgcctggagcagcagtactggctgtatcagctc
aacagggaggtggacgagctggagcagtggatcgcccagagggaagtggtcgccagctcg
ccagaactgggccaagactttgagcatgtctccgttctccaagaaaagtttacagagttt
gcctcggagacgggaagtgtggggcaggaacgtgtgacggccgtcaaccagatggtggac
gagctcatagactacggtcactctgaggccgccaccatcgctgaatggaaggacggggtt
aatgaagcctgggccgacctgctggagctgatggagaccagagcgcagatgctcgctgcg
tcacaccagctgcataagttcttctcagactgcaaagagattttggctcagatagaagac
aagcaccgcagactaccagaagttcgggctcggcaggggagcacctccaacaccagcacc
ctgcagagactcctgcaaaacttcgaacaggacatccagctgctggtcactcaggtgcgt
cagctgcaggagagtgcggcccagctgagaacggtgtatgcaggagagaaggccgaagcc
atcgcctgtcgggagcacgaagtgatgctgtgctggaaagagctgctgacatcatgcgaa
gagtgtcgactgcagatcaccaccgagacggacaagctgaggttcttcagcatggtccgg
gatcagatcatgtggatggagtcaatcatctgccagataggcacaggagaaaagccaagg
gacgtgtcatcggtggaggtgctgatgaattatcaccaaagccttaagagtgaagtggag
gcccgcagccagagcaccctggagtgtatcgaaatgggaaaaatgctgctggctgctaga
aaccctgctgctgaggagattaaagaaaagctggaaaaggtgatttccaagcagcgggag
cttttggagaagtgggacaagcactgggaggttttacagcaattgttggaggtccatcag
tttgcccaggaggcaatggtggtggaggcctggctgaccgctcaggagccgctgatcaat
agcaaggagctgggagggagcgtggacgaggtggagcagctcatacgccgacacgaagcc
ttcaggaaagcagccgccacctgggaggagagattcagctccctgcgacgcctcactacg
gtggaaaagttgaaagcagaacagagcaaattgcccccaacaccccttctggggcgtaaa
gtcttcctggacccacaagatgcatcctccgttccaacaaccctcccccgccttccagtc
tcccccgtcatgagacagaccatctacgagcagaatgaggccagctctcctccatctcct
tcgcctgccaccccaacgccctccccatcagctgcggctcgccggctggggtccacggtc
gccaactacacccccgtgatgaacggatccagctacagacacaacctggaggcgcggcac
ggtggagtggtgggtgtggcagctggactaggtcagccagctccctcgtcgattgcatct
gttgccacggcggcaatgttggtgtcggccaatcagatgcgagaaagtaccagcactgca
aaagatcaggccaccaaaaccatgagttacttacagccggggcaggcgggaaaggagctt
gaggtgaaatccttgccgtatctacggcaacccaaaatcaaacacttggacgatgctgtg
acgcctttgattgtggctagccgactggagagaggcagagagaggggtagagaacgggaa
cgaggggggggaatggcaacagagcgagcagaggtggcggtgatggctgaggtggtgctc
caggagccgggtcgagagggtctgcacagcgagcccaccagggggccgcggggatccagg
accgaccccctgggtcacgcagaacctcaggtccagacgtatcagcggcagctctccagt
gagcagctgatccaggcgcgcagagatgagctacctcaggaggtgtggagagaacaagca
gagaggaggcggacgctggagaggcaaacctccagtgaacaggagggccatgacggccgg
cggagagaaagggaccggcaccgaggggagagacaggagtccagtgatgacatgggcagg
gagcaatcagacagacgctctacaggaggagagaagagaaccaccatggcagagatagta
gagcagcttcaagaaagagaagcagcacaggctcgtggtgaggttccccgcctgcccaac
ggtataccagaaaagtcttcccgtcttgaccggcccagagccagggacagacccaaacca
agacgaaggcctcgtcccaaagagccaggagagacaacgcggaggtccagatctgctcca
gctcagagcagccagacggccccccaaccaccaacccatacagcacaccatgagggcttc
cttttccgcaagctggacatcgagagcatgaagaaaagcaccaatagcaggtcttgggtc
aacctttactgcgtgctgaacaaaggggagctgggtttctacaaggatgccaagaacact
accacgtcctacaacaacgagcccctgctcaacctctcccactgccactgcgacgtcacc
aacggctacaagaagaagaagaacgtcttcactctgaaaacgaaggatggcagtgaattt
ttgtttcatgcaaaggatgaggaggacctcaaagcatgggtgaacaacatcaccgccagt
atttcagagcacgaggagattgccaaatggggtcagccccaaccaactacctcatccacg
gacgaagggacacggcgagacggcagcaaagtggacaacaggtcggatagaggcggcgag
cgctccgatcgtggagaccggatagagcgggcggacaaggaaaaggaaagggaaaaggag
aaagagaaggagagggagagaggagagcggtcggagaaatcagaacgggcgggaaagtca
gacggaaaacgctccgagaagtcaagcaagaagaaatga
DBGET
integrated database retrieval system
