Cyprinodon tularosa (White Sands pupfish): 119796836
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Entry
119796836 CDS
T07496
Name
(RefSeq) neural-cadherin-like
KO
K27892
neural-cadherin
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ctul04515
]
119796836
Cell adhesion molecules [BR:
ctul04515
]
Cadherins
Cadherin related
119796836
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
Cadherin_CELSR2_9th
Ig_Shg
Cadherin_pro
EGF
hEGF
EGF_Teneurin
EGF_2
Cadherin_4
Big_9
EGF_Hmr-1
EGF_3
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
119796836
NCBI-ProteinID:
XP_038161513
LinkDB
All DBs
Position
Unknown
AA seq
2914 aa
AA seq
DB search
MIWGVLLCCLLTPAGGYQKQGRLPFFHGHIFENSPAASKVNGLSIPVKRIDAQKWCPLSG
MHFKLFGNGSEDFRVFAHHKRGNVLLKTSRVLDRETRSEYLLSVNLCCQTCASESVIFQV
ALVKVDVLDTNDHEPTLLSTDNVHISLDDTTALRSVVYRLEAVDEDSGKNAELTYTSIPK
NGSFYVVPKTGEVLLVDSILGLLSTIQLYIYVRDHGWPPLSSKAVLIHISPKRWMTRQAD
LMGPGRTGRLPRALLESSTVLSLNVSEDAGVGSVLMSLNPTRFQSAAYELIYPESESSPV
TVGRDSGDITVTRRLDRETEPFLELTVKIQDKRGPDWYLNKVKLAITDVNDNVPEWNMKP
YPYLAVVSPEAAAGTFVYQLQATDEDEGKSGEVEYFLSDGGDGCFAVDKKTGQVVTTGLV
LQKEREYLLSVVALDGLGSHSAPAMVSIVAGARAPQFTNTSYAITIPENTPEGQPFLVVL
AISFQKEQISYSLLINPSSIFSIRQDTGEISLTKTLDYESDQRRYLLMVRASEEPGSLST
ATEVQVLITDENDCVPEFLQSIYSVDGVPETVTTATSLLQVLATDCDSGLNAELTYYTLS
PDFSISPHGTVFPARRLDYERPNHLYEFVVMAVDSGDEPHSGTTTVRVRMVNVNDEAPEF
SQPVYRTFVSEDAGPNTLVATVLAKDPDGDGITYSITAGNEERNFVIDSQKGLIRLRSTP
LPKLQGLEYVLNVTATDDNASGGLHPLSSNARVVVGVDDVNNNKPIFEQCQQYREQASVL
ENQPAGTFVLQVHAVDADEGANGKVKYGLMHRDSAMPAFRIYPDTGVIVTALRFDRERQR
EYSITVTATDWAEEPLIGICQLAIQILDQNDNSPKFENLRYEYFLREDTLVGTSFLRVAA
HDDDFGTNAAITYSMSLEQPEYLQVNPVTGWVFVNQPISQRTYITRDIIATDGGNRNTSV
ELAVTITNVKNQPPQWEKDSYNVVIPENTARDTPIVTIKATSQLGDPRVTYNLEDGMVPE
TNMPVRFYLSPNREDGSASILVSEPLDYETTPFFSLRVRAQNVAAVPLAAFTRVYVNITD
VNDNVPFFTSSIYESSVTEGAQIGTSVLQVSAHDKDLGLNGEITYSLLSDSSGDHNFFRI
DPQNGIIYTEAVFDREARSSYLLEVQSEDGQESARPGRNKQPNTDTAYVRVFISDVNDNK
PVFAQRLYEVGVDENADVGLAVVTVSATDEDEGANAKLRYQITSGNKGGAFDIEPEVGTI
FISQLLDYEKQKRYKLLVLASDGKWEDYAAVVVTIVNKNDEAPVFSMNEYYGSVTEELDG
SPVFVLQVTATDPDKDADQGAIRYSIHGQGAESHFMINDITGEMYAQRTMDREERAVWRF
VVMATDEEGEGLTGFTDVIINVWDINDNAPTFVCAPDNCHSSVAENSPPGTFVVEMTAVD
LDDAAVGQNAILTYRIIENAQNSDNANLFTIDSSTGTVSVAADGLDRERADRHHLVVEAR
DGGGMIGTATVTIVVTDINDHVPKFIEDWCGARVPESTLEDSSVLELSAVDPDDGRNGQL
SYSIFAGDTEQRFYIVSHKLEQKGTLRLKKKLDFEHPDEQRFNLTVKVEDSNFSSLIHCM
ILVEDENDNAPVFTPSFHLLSPVPEDVPVGTSIIQVIASDSDSGPNGDIFYSILPHSDPY
GHFRVNRGGVVTVTHSLDRETVAGYELVVMATDRGTPALTGSVTVHLPLLDMNDNGPELE
MLYAPVLWENSPAPQVVWLNGSSTLLHVVDRDSPEHGPPFLISLPSEYSADFHLQDHGNG
SATLTTLRRFDRERQREYHLPVVMIDSGLPPITATSTLIITIGDHNDNAHQAGEKDVYVH
SRKGRMGNAALGKVYAPDPDDWDNKTYSLETSAAKYFSVNQSSGVLTVRQNTPVGSYWLR
VGVSDGVWPDVIAGVRVHTRELEEKAIQSSASLRLTGITAREFIDSNVEGKSRLEAFWDF
LTETLSVRPGSINIFSVADREARTVDIHFYVLTDNGYLRPEKLHTALAAHKKKLQSILRV
NVSQVQVDECVRTDCKTSGGCYTQLSVSDSPALIDSGALSLASVKVTSSAVCGCAAREMT
HRTCSSYPTYPCLNGGTCFDTQNGYRCHCPPQLEGPDCQQTRLSFLGNGYAWFPPIRPCF
DSHLSLEFMTEEEDGLLLYAGPLATLLPGDNEDYIAIELIGGTPSLKINHGSGTLVLQLT
NVGVSDKLWHRLDVRTNSKEVRLTLDRCSSAVVMEAEGVESWAMTEDRSSCEIRGVTPNR
DKYLNVSHVLQLGGVNENISYEYPQLQHKHYTGCIRNLIVDSKLYDLGSPAESFSTSPGC
SLIDNHCTDLEQNPPCGKRGSCHGEWGSFSCLCEKGFTGPHCDQVTPEFSFDGRSHIQLQ
LLWSLPARRTQVQVGVRTRALTGVILSLLSQEQSEYLRLEVFHGLLAVLYNLGDGDYNIS
LPYHRLDDGEWHEVELDRYGREFTLRLDGGGGRLEVTASPGQSQEIVIDPSVVMLGNSFP
SGHNRSFLGCLRDVRLNGRSVPLDQDQHSEGLQVLVASQGVSVGCYSDSCRKHHCSPPLV
CVDLWRQHDCRCPAGHMTKETSVGRVCIYTLCASRPCRHGTCVAHSPARYSCHCSEGYRG
RHCEVALAVFYSEDSNSLSLSSMFAISICVMAFLVLMLGLFLYSCWRRHKGLKEGVYHVS
AHHGEWEDIRENVLNYDEEGGGEQDQNAFNMVELQRSLQPSPAQSLRYSYPHNSSSYPQT
KLPQDNNKKGMANGNGSAAIALRLAIPPSEAETLSSPLTFRRSQRAFSFSSQDLARYLCE
VIRDMEHAEDPGSLTTPRRPSGKEHSLASVRSLSSLSASQGSEVRLHAAQITRMDTFRAL
RAVMCDLRGDSKIPECQRDKLKESRGQLKCEKNG
NT seq
8745 nt
NT seq
+upstream
nt +downstream
nt
atgatttggggtgttttgctgtgttgccttttaacgccggcaggcggatatcaaaaacag
ggtcgactgcctttctttcatggacacatttttgagaactcgccagcggcttctaaagta
aacggactcagcattccagtgaagcgcatcgacgcgcaaaaatggtgcccgctgagcggg
atgcactttaaattgtttggaaatggcagtgaggattttcgtgtctttgcgcaccacaag
cggggaaacgtgttgctgaaaacttccagggttttagacagagagacgcgctcagaatac
ctgctgagcgtcaatttgtgttgccagacttgcgcgtcggaatctgtcattttccaggtt
gctttggtgaaagtggacgtgctggacaccaacgaccacgaaccgaccttactgagcaca
gacaatgttcatataagtttagatgacaccactgcgctccgtagtgttgtttacagactg
gaagctgtcgatgaagacagcgggaagaacgcagagttgacgtatacctccataccaaaa
aatggcagtttctatgttgttccgaagacgggggaagttttgcttgttgactctatcttg
ggcctgctttctactatacaattatatatttacgtgcgagatcacggttggccccctttg
agcagcaaagctgtgttaattcacatttctccaaaacgatggatgacgcgccaggctgat
ttaatgggaccagggaggacaggacgattaccgagggcgctcctcgagtccagcaccgtg
ctttccctaaatgtttctgaggatgccggcgtcggctcagttctaatgagtctaaatccc
accaggtttcagtcagccgcctacgagctcatttatccggaatcagagagctctccagtc
accgtgggccgcgacagtggagatataacagtaacccggaggctggatagggagactgag
cctttcctggagctcactgttaagattcaagacaaacgaggccctgattggtacctgaac
aaggtgaaactggcaatcactgatgtcaacgacaacgtccctgagtggaatatgaaacca
tacccgtacttggctgttgtgtctcctgaggcagcggcaggaacatttgtgtaccagcta
caggcaactgacgaagatgagggtaaaagtggagaagtggagtacttcttgtcagatggg
ggcgatggctgctttgctgttgacaagaagacaggacaggtggtgaccacggggctggtt
cttcagaaggagagagagtacctgctaagtgtggttgcccttgatggcttgggaagccac
agcgcacctgccatggtatctatagtggcaggggcccgagcaccgcagttcaccaacacc
agttatgccattaccataccggagaatacccctgaaggacagcccttccttgtggtatta
gctatttccttccagaaggagcaaatcagctacagcctgctgatcaatcccagcagcatt
ttcagcattcggcaggacactggagagatcagccttaccaagacactggattatgagagt
gaccagagacgctaccttctgatggtgcgagctagtgaggagcctgggagcctgagcact
gccacagaggttcaggtgttgataacggatgagaacgattgtgtcccagagttcctgcag
tccatctacagtgtagatggagtgcctgagacagtaaccacagcaacatctctactgcag
gttttagccacagactgcgactcgggattaaacgctgagctcacctattacaccctgagc
ccggatttcagcatttcacctcacgggactgttttccctgcaaggcggctcgactatgag
aggcctaaccatttgtatgagtttgtggtgatggcagtcgacagcggggatgagcctcat
tctggcaccaccacggttcgtgtgaggatggttaatgtcaacgatgaagcccctgaattc
tcccaacctgtgtatcgaacattcgtttccgaggacgccggtcccaacacgcttgttgcc
acagtcctggccaaagatccagatggcgatggcataacctactccataaccgcaggcaat
gaagagagaaactttgtcattgacagccagaaaggtttgatccgtctgcgctctactccc
ctgccaaagcttcaaggtttggagtatgtcttgaatgtaacagccacagatgacaatgca
tcaggcgggctgcaccctcttagttctaatgcccgggtcgtcgttggagttgatgacgtt
aacaacaacaaaccaatatttgagcagtgccagcagtaccgagagcaggcttcagtgctg
gagaaccagccggcggggacttttgtgttgcaagtgcatgcagtggatgcagatgaggga
gcaaatgggaaagtgaaatatggcttaatgcatagagacagcgccatgcctgccttcaga
atttatccagacacaggagtgattgtgacagctctacgcttcgacagggagcggcagaga
gagtattcaattacagtaacggccactgattgggcagaggagccgctcattggcatctgt
cagctcgccatacagatactggaccagaatgataacagccccaagtttgagaatttgcgc
tatgagtattttttaagagaagacactttggttggtaccagtttccttcgtgttgcagct
catgatgatgattttggcactaatgcagccattacttactccatgtcactggagcagcct
gagtacctgcaggtcaaccctgtgactggatgggtctttgtcaaccagcccatatctcag
agaacctatataacacgggacatcattgcaacagatgggggaaatcgcaacacttctgtg
gagctggcagttaccattaccaacgtgaagaaccagcctcctcagtgggagaaagacagc
tacaatgttgtcatacctgagaatactgccagggacacacctatagtgacaataaaggcc
acctctcagctgggtgacccgagagtgacctacaaccttgaggatggcatggtgcctgaa
accaacatgccagttcgtttctacctctcaccaaaccgtgaggatggatctgcttccatt
ctggtgtcagagccgctggactatgagaccacaccattcttttctttaagggtccgagca
cagaatgtcgctgcggtccctctagcagcttttacaagggtgtatgttaatattacagat
gtcaacgacaatgtgccgttttttacatcctctatttacgagtcctcggtaacagaagga
gcccagatcggaacttcggttctccaagtgtctgcccatgacaaagacctgggtcttaac
ggagagatcacttactctttgctcagcgacagcagcggcgaccacaacttctttcgtatt
gacccccaaaatggaatcatctacacagaagctgtatttgatcgggaggcccgtagttcc
tatctgctggaggttcagtcagaagatggccaagagtcagcccgacctggcagaaataaa
cagcccaacacagacacagcatatgtgagggttttcatcagcgacgtcaatgacaacaag
ccagtctttgctcagcgactgtatgaagtcggtgtcgatgagaatgcagatgttggcctg
gctgtcgtcaccgtcagcgccactgacgaggatgaaggagccaatgccaagctccgctac
cagataacatctggcaacaaaggaggtgcttttgacatcgagccggaggttgggacaatc
ttcatttcacagttattggactatgagaagcaaaagagatacaagttgctggttcttgcc
tcagatggaaagtgggaagactatgccgctgttgtggtcaccatagtcaataaaaacgat
gaagcacctgtgttttctatgaatgagtactatggatcggtcacagaggagcttgatggg
tctcctgtttttgtgctacaggttacagccactgacccagacaaagatgcagaccaggga
gccatcaggtactccattcatggccaaggtgctgagtcccatttcatgatcaatgacatc
acaggggagatgtacgcccagcgaaccatggaccgagaggagcgggccgtctggcgcttt
gttgttatggcaacggacgaagaaggcgaggggcttactggctttacagatgttattatc
aacgtgtgggacatcaatgacaatgccccaacctttgtgtgtgcacccgataattgccat
agcagtgtggcagaaaattcacctcctggaacgtttgttgtggaaatgactgctgtggat
ctggacgatgcagctgtgggtcaaaacgcaatcctcacctaccggattatagagaatgca
caaaattcagacaatgcaaacctgtttactattgattcaagcactggcaccgtatccgtg
gcagcagacggtctggatagagagcgtgctgataggcaccacctggttgtggaggccagg
gatggtggtggtatgattggcacggccactgtcacaattgtggtgacagacatcaatgac
catgtgccaaaatttatagaggactggtgtggtgctcgtgtacctgagagcacacttgag
gactcttccgtcttggagctgagtgctgtggaccctgatgatggtagaaatggtcagctg
tcatacagcatctttgcaggggatacagagcagcgattctacatagttagccacaaactg
gagcagaagggcactctaagactgaaaaagaagctggactttgagcatccagatgagcag
aggtttaacctgacagtcaaagtggaggactcaaatttttccagtcttattcactgtatg
atccttgttgaagatgaaaatgataatgcgcctgtttttaccccaagttttcacctgctg
tcccctgtacctgaggatgtaccagtaggaaccagtataattcaggtcatagcctctgat
tctgactcaggcccgaacggagatattttttacagcatcctcccacattcagacccctat
ggacacttcagagtcaaccgaggtggtgttgtcactgtcacgcattcactggatagggag
acggtggcaggttatgagctggttgtcatggcgacagaccgtggcaccccagcccttact
ggcagtgtcacggtccacttgcctttgcttgacatgaatgataacgggccagagctggag
atgctctatgctccagtgctgtgggagaacagtcccgctcctcaagtggtctggcttaac
gggagctcaactttacttcatgttgtggacagagactccccagagcatggacctccattc
ctcatctcccttccctcagagtactctgctgacttccaccttcaggaccatgggaatggc
tctgccacactcaccaccctccggagatttgacagagaaaggcagagagagtaccattta
ccggtggtaatgattgacagtggacttccaccgataacagccacaagcactctcatcatc
actattggtgatcataacgataacgcccatcaggcaggggagaaagatgtctatgtgcat
agccgcaagggaaggatgggaaatgcagctctagggaaggtgtatgccccagatccagat
gattgggacaacaagacctacagtctggagacaagtgcagccaaatactttagtgtgaat
cagagctcaggagtgctgactgtccgacaaaacactccagtaggcagctattggttaaga
gttggagtgtctgacggcgtatggcctgatgtgatagcaggagttagggttcataccaga
gagctggaggaaaaggccattcagtcgtctgcttctctgcgtttgacaggcattacagca
agagaatttatcgactcaaatgtcgaggggaaaagtcggctggaggcattctgggacttc
ctgactgaaaccctgtctgtcagaccaggaagtatcaacattttcagtgtagcagacaga
gaggcgagaacagtggacattcatttctatgtgctaaccgataatggctacttgcgccca
gagaaactgcacaccgccctagcagcacataaaaagaagctgcagtcaatcctccgtgtg
aatgtgagccaggtgcaggtagatgagtgtgtgcgcactgactgtaagacatccggcggc
tgctacacacagttaagcgtcagtgactcacccgccttgatagactctggtgctttatcc
ctggcttcagtgaaagtgacatcttcagctgtgtgtggctgtgctgctagagaaatgacc
caccggacgtgctcctcttacccaacttacccttgcctcaatggagggacatgcttcgac
acacaaaatgggtacaggtgccactgccccccacagctcgaagggccagactgtcagcag
acgagacttagtttccttggtaacggctatgcctggtttcctcccataaggccatgcttt
gatagccatctttcactcgagtttatgacagaggaagaagacggactgcttctgtatgca
ggccctttagccactcttttaccgggggataatgaagactacatcgccatagaactgatt
ggtgggactccaagccttaaaatcaaccatggttctgggaccttagttctccagttaaca
aatgttggagtgagtgacaaactttggcatcgacttgatgtgaggaccaacagcaaagaa
gtgcgcctaaccctggatcgatgctcaagtgcggtagtaatggaagccgagggagtggaa
tcatgggcgatgacagaggatcgctcatcctgtgaaatacgaggggtcacaccaaacagg
gataagtacctgaacgtaagtcatgttctgcaactaggaggagtcaacgagaacatatca
tatgaatatccacagctgcaacacaaacactatactggatgtataagaaacctgattgtg
gacagcaagttgtatgaccttggttcccctgctgaatccttcagcacttcgccaggctgc
agtcttattgataaccactgcactgacttggagcagaatcccccctgtggaaagcggggc
agctgtcatggggaatggggctctttcagctgcctgtgtgaaaaagggtttacaggcccg
cattgtgatcaagtgactccagagttttcattcgacggccggagccacattcagctgcag
cttctgtggtccctgcctgcaaggcgaacacaagtacaggttggggtccggactcgtgcg
ttaactggggtcatccttagcttgctgtcccaggagcagagtgaatacctgcgtttagag
gttttccatggtctgctggctgttttatacaacctaggagatggagactacaatatctct
ctgccgtaccatcgtctggatgacggggaatggcatgaggtggagttggatcggtacggc
agagagttcaccctaaggctggatggaggtggggggcgacttgaagtcacagcctcacct
ggccaaagtcaggagatcgttattgacccctctgtggtcatgcttgggaactcttttcca
tcaggacacaatcgcagttttcttggctgtttgcgtgatgtgaggcttaacggccgctcc
gttcccctggatcaggaccagcattcagaaggacttcaggtgttggttgcttcgcagggc
gtctctgtcggctgctactcagattcctgcagaaagcatcactgctcccctcccttggtc
tgtgtggacctctggagacagcatgattgcaggtgccctgcgggccacatgaccaaagag
acctctgtgggcagagtgtgcatttacacgctctgcgctagccggccgtgtcgacatggc
acgtgcgtggctcactcgccggcccgctactcgtgccactgcagtgagggctaccggggg
cggcactgcgaagtggcccttgccgtgttctacagtgaggatagcaacagcctcagcctc
agctccatgtttgccatcagcatctgtgtcatggcctttctagtgttgatgctggggctg
tttctttactcctgctggaggagacacaaaggcctgaaggagggtgtttaccacgtgtct
gcacaccacggcgagtgggaggacatccgagaaaatgtgctcaactacgacgaggaaggt
ggcggggaacaggaccagaatgcttttaacatggtggagctgcagcgctccctccagccc
agccctgcacagtccctacgctacagctatccgcataactccagctcctacccccagacg
aagcttcctcaagacaacaacaaaaaggggatggcaaatgggaatggcagtgcagctatt
gcactgcgtctggccatccctccctcagaggctgaaaccttgtcctcacctctgaccttc
cgccgctcacaaagagccttctccttctccagccaagacttggctcgctacctttgtgag
gttatcagagacatggagcatgcagaggaccctggaagcttgaccacaccacgccgtccc
tctggaaaggagcacagcctggcctctgtgcgctccctaagctctctcagtgcatcccag
ggttcggaagtcaggcttcacgccgcccagataacccggatggacacatttagagccctt
cgtgccgtgatgtgtgatctaagaggagactccaagattccagaatgccagagagacaaa
cttaaggagagcagggggcagttgaagtgtgagaagaacgggtga
DBGET
integrated database retrieval system
