Cyprinodon tularosa (White Sands pupfish): 119796840
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Entry
119796840 CDS
T07496
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119796840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ctul04121
]
119796840
Enzymes [BR:
ctul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
119796840
Ubiquitin system [BR:
ctul04121
]
Ubiquitin ligases (E3)
HECT type E3
119796840
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
119796840
NCBI-ProteinID:
XP_038161517
LinkDB
All DBs
Position
Unknown
AA seq
1010 aa
AA seq
DB search
MFSWGEDCQRGFWKGDFSTDEGVHHLNVDYKLSDLSVGRSVLAFVKSNGNAFILRTYENK
DGKRVRGKQKFVKCKEKIEAVSCEDDVVTLLSERGSVFCVDTTRTPYSPRTLDVFSNIPV
AQVACGSQHSVALTKECQVYTWGLDSRGQLGLGKRGSGARSPQQVRSLSSVPVVQIFAGG
DHSFALSVSGGVFGWGRNNCGQLGLGGTKDIFTPTCVSSLNLKKTSDICCGKDHTAVLTK
QGAVFTFGSGQYGQLGHNSLKNELHPRLIAELWGTKVIKIACGRYHTLALTDGRKVYSFG
CGEQGQLGNRTENCPSVPLPVRLPRVADSNQPKIGTIFAGENCSFATCSSEECVDRNLDA
NRINNATEYGLENMVDNWISNCDSKSWKKTKQEIRRTFSTATCLNKSFLEQMRDKHFQTS
SKCHGLNFKLARQYFKKLVKVDIVWKEVEAAILHLLPLLDKNPVAVESLRIFLLLNELLH
VIQKHRKQQSSKLAETVAAVVSSLSMTSLEVLGEWWFLLSRSSMGRFVSVWRQALSGILS
KYDAPRSSGVRNLLQVLQYMHNINSRVAESQRLPESEFYLSIDQDFLLDDLDMWRLKSKR
WYAHSEPLVLCNFPFVMNLQAKTLVFYTNTELNTEEVVMSSLEEMFMHMILGFELCSPDL
PGLLLQLNRASMLKDTFEQLAQADESSYKKKLVVFFNGNYNIDDVLLNIKDFFHAVFNEL
MSPESRMFMFNDSQTLAWFSSKASEKDQNFYLFGVLCGLALYNAMLIYLPFPLALFKKLL
GVRPTLEDLKEFSPSVGKSLQCILDEYTDEDLEDIFFSIPWDGAEVDLDPENPEKQITSK
NKHEFVDAFVDHVFNVSVKTAFEEFKKGFLQVCDRDLVRLFRPKELQEILVGNDFHDWER
LKQSTIYEGQFNADHPTIQTFWEVFDELTENQKKTFLWFVTGFERVPVLGLDKIQMKIKE
INKKELSHDQYFPETHTCFSTLELPLYSSKEIMQTKLIEALSNKRINPCV
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgttttcatggggagaggactgtcagcgaggcttctggaaaggagacttcagcacagat
gaaggagtccatcatttaaatgttgattataaactctcggatctgtctgtaggtcgcagt
gtgctggctttcgttaaaagtaacgggaacgcgtttattttgcgcacttatgagaacaaa
gatggaaagagagttcgaggaaaacagaagtttgtgaaatgtaaggagaagattgaggcc
gtgagctgtgaagatgatgtggtgacgctgctgtctgagagaggctcagttttctgcgtg
gacacgactcgcaccccgtactcacccaggacgttggatgttttctctaacataccagta
gcacaggttgcttgtgggagccagcactcagttgccctgacaaaagagtgtcaggtgtat
acatggggtcttgactccaggggtcagctgggtctgggaaagagaggttcaggagccaga
tcacctcaacaagtccgatccttgtcgtcagtcccagtggttcagatctttgcaggagga
gaccacagctttgccctctctgtgtcaggaggcgtgtttggctggggaagaaataactgt
ggacagcttggactaggaggaacaaaagatatatttacaccaacttgtgtcagtagtttg
aatctgaagaaaacaagcgacatttgctgtggaaaggaccatacagccgttctgacaaag
cagggggcagtgtttacatttggctctggtcagtatggacaacttggacacaattcattg
aaaaatgaactccatcctcgacttattgctgaactgtgggggactaaagttatcaagatt
gcatgtggcagatatcacactttggctttgacagacggccgtaaggtctactccttcggt
tgcggggagcaaggtcagctgggaaacagaacagaaaactgtccatctgtgccgcttcct
gttcgtctacctcgggttgcagactcaaatcaacccaaaataggaactatctttgctgga
gaaaactgttcatttgcaacatgctcttctgaagagtgtgtggacagaaatctagatgct
aacagaatcaataatgcaactgaatatgggctggaaaacatggttgataactggatctct
aactgtgatagcaagtcatggaaaaagacaaaacaggaaatccgcagaacattttcaact
gcaacctgtctgaataaaagcttcctagagcaaatgagagataaacatttccagacctct
tcaaaatgccatggtctgaactttaagctggctcgacagtattttaagaaattggtgaag
gtggacatcgtttggaaagaggttgaagctgcaattctgcatttgcttcctctccttgat
aagaacccagttgcagtggaaagtctgaggatctttctgctccttaatgagctccttcat
gtcatccagaaacacaggaagcagcagagcagcaagctcgctgagacggttgctgctgtt
gtttcaagcctgtcgatgacaagccttgaggttttaggggagtggtggttcttgctatct
cgatccagcatggggagatttgtgagcgtgtggaggcaagctctctctgggattttgtcc
aaatatgatgctcctcgcagtagcggtgtcagaaacctgcttcaagtacttcagtacatg
cataatattaacagcagggttgcagagtcacaaaggctgccagaaagtgagttttatctg
tcgatcgaccaagattttctgcttgacgacctggacatgtggcgtttaaaatccaaacgc
tggtatgcgcattctgagccacttgttctgtgcaacttcccatttgtgatgaatctgcag
gcaaagacgctggttttctacacaaatactgagctcaacacggaagaggttgtgatgtct
tccctggaggagatgtttatgcatatgattctgggcttcgaactttgttcccctgacctt
ccaggcctcctactgcagttaaaccgagcatctatgttaaaggatacatttgaacagctg
gctcaggctgacgaaagcagctacaagaagaaacttgtggtatttttcaatgggaactat
aacattgacgatgtcttgctcaatataaaagacttctttcatgcagtatttaatgaactg
atgtctccggagtcaaggatgttcatgttcaatgactcgcaaacactggcatggttctcc
tccaaagcttcagagaaggaccagaatttctatctgtttggagttctctgtggacttgct
ttgtacaacgctatgctaatttaccttcccttccccctggcgctcttcaaaaagcttctg
ggagtgagacctacactggaagatttgaaagaattcagtccaagtgttggaaagagtctg
caatgcatcctggatgagtacacagacgaggacctagaagacatatttttttcaatcccc
tgggatggagcagaggtcgatcttgatcctgaaaatcctgaaaagcaaataacaagtaaa
aacaagcacgagtttgtggacgccttcgtggaccatgtcttcaatgtttctgtgaagact
gcatttgaggaatttaaaaaaggatttctccaagtttgcgaccgggatttagtgaggctg
tttaggccaaaggaactacaagaaatcctagttggaaatgacttccatgactgggagaga
cttaaacagagtacaatttatgagggccagttcaatgctgaccatccgaccatccagaca
ttttgggaggtttttgatgagctaactgagaatcaaaagaaaacttttttgtggttcgtc
accggatttgaaagagtgcctgtactcggattggataagatacagatgaaaatcaaagaa
ataaacaagaaggagctctctcacgaccaatacttccctgagacgcacacgtgtttctcc
acattggagctgccgctgtattcaagcaaagagatcatgcaaaccaaactgatagaggct
ctgagcaacaaaaggatcaacccctgtgtttga
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