Cyprinodon tularosa (White Sands pupfish): 119796890
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Entry
119796890 CDS
T07496
Symbol
casc3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03013
Nucleocytoplasmic transport
ctul03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119796890 (casc3)
03015 mRNA surveillance pathway
119796890 (casc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctul03019
]
119796890 (casc3)
Messenger RNA biogenesis [BR:
ctul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119796890 (casc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
119796890
NCBI-ProteinID:
XP_038161589
LinkDB
All DBs
Position
Unknown
AA seq
735 aa
AA seq
DB search
MADRRRRRRRASQDSEDDDESGSGSDSGRSGSPATKARGREPDPAEVTVSRSEAKSDVES
ECESEDGAGEAVLSDYDSADPEENGSHSEGGEEEEEGFSEEEAPAAAGEPKPAAAAPTQD
EGDEEEGKGEEEEEAGGVREEESKAEEKGNLAGERQSGDGQESTDDPETKAGGKPGQQLD
DDEDRKNPAYIPRKGLFFEHDVRGQTQEEERPKGRNRKLWKDEGRWEHDRFREEEQAPKS
REELIAIYGYDIRNGASGPGERAYRQRRPRQASPSRDKRWREGPRPARSWQNRAAPPSSV
PPPSSAFPPLSAAQRSSTSSRPPPARSRPPHHNQAHPSSHAEYRNNESNAPQVQHRERHG
PKAPLDPVGERGGASRGGRGLAGRGGSSVVIEEVSVSQSGEAEEDPRSVTAAQSPRRQEQ
RGGADRAASDPALQPSAANPETSPPAERPVERKSYSLARRTRSRPADLGSKQASVEESAA
GGNTPSPAGGGGKNWAGEGDDAGQTGGGGVAELDQAVAQLNLARRNWSPNQTSFVRSEMR
GLPSPMHVTGGPPQFPNMEEMGVSSNRAKRYSSQRQRAVPEPAPPMHLGVMDGHYYEPIS
YQGPIYTHGEGPAPIPPQGMLVQPEMHIPHPGLHPHQSGAPITNPALYGAPPVSLSPGQP
QQLLPPPFYPPPGVMPFQYPAMYPNPQGQSQVTYGGVTYYDTMQQQAQPKPSPPRRTSQP
VTVKPPPPEVPFASE
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcggaggaggaggcgcgcgtctcaggacagcgaggacgatgacgag
tccggctcgggttcggacagcgggaggtccggttctcctgcgacaaaggcccgaggccgc
gaacccgacccggccgaagtgacagtgagccggtccgaggccaagagcgacgtagagtcc
gagtgtgagagcgaggacggcgccggagaagccgtcctgtccgactacgacagcgccgac
ccagaggagaacggctcccactccgagggaggggaagaggaagaggagggcttcagtgag
gaagaggctccggctgcagccggcgaacccaaacccgccgccgccgccccgacccaggat
gaaggagacgaggaagagggaaagggggaggaggaggaggaagcaggaggcgtcagggag
gaggagagtaaagctgaggagaaagggaacctggcaggagagcggcagagcggagacgga
caggagtcgaccgatgacccggaaaccaaggcgggggggaaaccgggtcagcagctggat
gacgacgaggaccggaagaacccggcttacattcccaggaagggtctgttcttcgagcac
gacgtccgcgggcagactcaggaggaggagcggcccaaaggtcggaaccggaagctgtgg
aaagacgagggtcgctgggagcacgacaggttcagggaggaggagcaagcgccgaagagc
cgcgaggagctcatcgccatctacggttacgacatccggaacggcgccagcggccctgga
gagcgagcgtacagacagcgccgacccaggcaggcgtcccccagcagagacaagcggtgg
agggaggggccccgaccggcccggtcctggcagaaccgagccgctcccccttcgtctgtc
ccgccgccctcctctgcctttcctcccctctccgcggctcagcggagcagcacctcctcc
agaccgccccccgcccgcagcagacccccccaccacaaccaagcgcacccctcctctcac
gcggagtacaggaacaatgaatccaacgcacctcaggttcagcacagagagcggcacggt
cccaaagctccgctggacccggtgggggagagaggcggggccagcagaggggggcggggc
cttgcaggaagggggggttcttctgtggtcatcgaagaggtttctgtcagccaatcaggc
gaggcggaagaggatccgaggtcagtgacggcggctcagtcaccaagacgacaggagcag
aggggtggagccgacagagccgcctctgaccccgccctccagccttcagcagccaatccg
gaaacctctccccccgccgagcgtcccgtggaacgtaagtcctactccctggcccgcagg
actcgctcccggcccgcggacctgggtagcaagcaggcctcagtcgaggagtcggcagcc
ggggggaacacgccgtcccccgctggagggggagggaagaactgggcgggggagggcgac
gacgcgggtcagacgggagggggaggagtggcggagctggaccaggcggtggctcagctc
aacctggcccgacggaactggagtccaaaccagacgtcgtttgttcgctccgagatgaga
ggtctgcccagtccgatgcacgtcaccggcggcccgcctcagtttcccaacatggaggag
atgggcgtcagctccaaccgagccaagcggtactcctcccagcgccagagagccgtgccg
gaaccggcgccgcccatgcacctgggagtgatggacggccattactacgagcccatatcg
taccagggaccaatctacacccacggggaaggccccgcccccatccccccacagggcatg
ctggtccagccggagatgcacatccctcatccgggtctccatccccaccaatcaggagcc
cccatcactaaccccgccctctacggagcgccgcctgtgtctctgtcgccggggcaacca
cagcagctcctgcctcctccgttctaccctccgccaggagtcatgcccttccagtacccg
gccatgtacccaaacccgcagggccagtcccaggtgacctacggcggcgtcacgtactac
gacaccatgcagcagcaggcccagcccaaaccatcacccccccgccgcacctcccagccc
gtcactgtcaaacccccccctccagaggttccgtttgcctcagagtga
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integrated database retrieval system
