Cyprinodon tularosa (White Sands pupfish): 119796994
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Entry
119796994 CDS
T07496
Symbol
rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119796994 (rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ctul01009
]
119796994 (rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ctul04131
]
119796994 (rb1cc1)
03029 Mitochondrial biogenesis [BR:
ctul03029
]
119796994 (rb1cc1)
Protein phosphatases and associated proteins [BR:
ctul01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119796994 (rb1cc1)
Membrane trafficking [BR:
ctul04131
]
Autophagy
Autophagosome formation proteins
ULK complex
119796994 (rb1cc1)
Mitochondrial biogenesis [BR:
ctul03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
119796994 (rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Transketolase_C_1
Motif
Other DBs
NCBI-GeneID:
119796994
NCBI-ProteinID:
XP_038161737
LinkDB
All DBs
Position
Unknown
AA seq
1612 aa
AA seq
DB search
MKLYVFQVNNGSTLTFDTDLAVQNVLELKHAIYAKYKVAVQHQVLVVNGGECMAADRRVC
SYSAGTETNPIFLFNKEMILSDRDPTIPKTTFSIESEIQVKVEESLLMPAVFHTVASRTQ
LALEMFEVAKKLCSFCERLVHDEHLQHQGWAAIMANLEDCTLSYQKLLMKFNTAYTNYQQ
DLEEIKIKLSKLGTSVSVMARIPLLECLTRHSYRESIEKSSSTPEKDSDETEEEKSTDSV
LCATQAPMSSKSTPPSFASGNAPCEPEGDQETNKMTESGGLTAALLDDNTPELPCQSSFN
VTLLDWINVQDRPNDVESVVRKCFDSIHRLDPRIIQPFLADCRDTIAKLDNQNMKSIKGL
EDRLYALDQMIASCKKLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSHTNQLMIMLN
NHRKLLDIKKKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKLQALLRLLTELIERVRV
VDALSTVPQMYCLAVVEVVRRKMFLQHYREWADALVKDGKRMYEAEKFKRESFGKLFRKS
FLRNRLFRGLDSWPPTSFCTRKPRRFDDELPDISLDDLQYLKSCCPVEVQPFLMIPAMCD
FEPLNRHVETLHKLVQAAQSVDEMSRTITDLLSEQRASCSQSTQRSTAQTPQAESRPGTT
TPVPSKTPLSLSLQGPGCQPLHVPVPAPLEDLSPDSIDAQTFDFETIGHPNMDPVLQQGS
LDLDSLAESPESDFMSAVNEFVIEENMTSPNPISDPTSPEMMVESLYSSVINAIDNKRMQ
DTTTLEKENSRIASLKNALEQYRCTAEESHSNLRRVKDDLLYLRSSVLKEQQDFGLALCS
MAAEVRSTVEQISQSHKIESNEQHKQELLLVRQQLEKQVQELTQENQVNQNIVRDVQRAM
LELEGLMERKEKELTQLESERERWIEKERNFADKIKNLEQLHCDQTEEIKALLTSKDSLA
TQLENLHFEIERSQQKIREELEAVSQCHLKELEDKLVQEHKKELDSLNKNNKEALEHLTE
ENSTKLTEAADHHASAIKDKDSQIKEMEARLTELAELRCRLEVELALKESETEEVRILFE
EAKMQQTEAVKNQVEAETKVLRDELTDLKRKLEAKNEEYEVDLAELRTLMRIEKDHCISE
LVDRHEEEALMLHGKISALQQHSQDLNKYHEQQQEALREELAALSEEKEKQFRSFQELEQ
ELRTVIKNLQAENDLLSKNLEQERRAAQKEEASNVVSMEAFKELEQQKEEMEKRLLEKNR
QLENELHEKKLSESEEGMPLHAEDRAGAAAPLSLDSALQERLQQERASLQSQIELLEKQK
KEEIQNLKTSLIAEQQTNFNTVLTREKLKKEQIINDLTEKLRKVTQQQEKDKALIETLSE
DRASMMQEKKQLEEELNRLRNSALVSSAFFPSNSAQDLSEAGAAGRALPVAGACSSETPA
EMDRLAPVATFRDDEHVDSAVEASLVAADDTMMSEEKQRIMLLERTLHMKEEENKRLSQR
LMSQSMSSMSSRHSDKIAIRDFQVGDLVLIILDERHDNYVLFTVGPTLYFLHSESLTALD
LKPASGTSRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNRKV
NT seq
4839 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgtatgtgttccaggtcaacaatggcagcacattaacatttgacactgatctt
gctgtccagaatgtactggagcttaaacatgccatctatgccaaatataaagtcgccgtt
cagcatcaggtccttgttgtcaatggaggggaatgtatggctgcagacagacgggtctgc
agttacagtgctggcactgaaaccaaccccatatttctgttcaacaaagagatgatctta
tctgaccgtgatccaacaatcccaaaaaccaccttctcaattgaaagtgagattcaggtt
aaggtggaagagtcattactgatgccagctgtttttcacaccgttgcctcacgaacacaa
cttgctctggaaatgttcgaagttgccaaaaaactttgctctttctgtgaacgtttggtt
catgatgagcatctccaacatcaaggctgggcagccatcatggctaatctggaggactgc
accctgtcctatcagaagttgctcatgaagttcaacactgcatacacaaattaccaacag
gacttagaagaaattaaaattaaactttcaaagttagggacctcggtttctgtaatggcc
aggatacctctgctggaatgtttgacgagacacagttacagagagagcatcgagaagtcc
agttcaactccagagaaagattcagatgagaccgaagaggaaaaatccacagactccgtc
ctctgtgctactcaagccccgatgtcctctaaatcaacgccaccctcgtttgcatccggg
aacgccccatgtgagccagagggagaccaggagactaacaaaatgactgagagcggtgga
ttgacagcagcacttttagacgataacactcctgaactcccctgccagtcttctttcaac
gtgacactattggactggatcaacgtgcaagacagacctaatgacgtggaatcggtggtg
aggaaatgctttgactccatccacaggcttgaccctcggatcatccagcctttcctggca
gattgccgggatacaattgcaaagctagataatcagaacatgaaatccatcaaagggctt
gaagacaggttgtatgctctagaccaaatgattgcaagctgtaagaagttggtgaatgag
caaaaagaacttgctcagggttttttggccaatcagaagcgagctgagaacctgaaagat
acatccgttttgcctgacttgtgtctgagtcacacaaaccagctgatgattatgctgaac
aaccacaggaagctgctagacattaagaagaagtgcaccacggccaaacaagagctggca
aacaaccttcaagtcagactcaaatggtgctgctacgtgatgctccacgcagatcaggac
ggggaaaagcttcaggctcttctgcgacttctgactgagttaatagagagagtgagggtg
gtggatgccctcagcactgtgccccagatgtactgcttggcggttgtggaagttgtcagg
aggaagatgtttctgcaacactacagagagtgggcggacgcccttgttaaggatgggaag
cgaatgtatgaggcggaaaagttcaaaagagaatcctttggaaaactcttcaggaagtct
tttctccgaaatcgattgtttagaggacttgattcttggcctccaacttcgttttgtacg
cgtaaacccagaaggtttgatgatgaacttccagacatctcacttgatgacctgcagtac
ttgaaatcgtgttgtcctgttgaggtgcagcctttcctaatgattcctgccatgtgtgac
tttgagcccttaaatcgccatgtagaaacacttcataagctggtccaagccgcgcagagt
gtggacgaaatgtctcgaactatcactgatctattgagtgaacaaagggcatcctgtagt
cagagcactcaaagatcaacggcacaaactccacaggctgagagcaggcctgggaccaca
actccagtgccctccaaaacgcctctctcacttagccttcagggaccaggctgccagccc
ctccatgtacccgtgccagctcctttagaggatctctccccagacagcattgatgcacaa
acatttgattttgaaaccataggccatccaaacatggatcctgtcctgcagcagggatcc
ctggacttggattctcttgctgaaagccctgaatccgattttatgtctgctgtcaatgag
tttgtgatcgaagagaatatgacctcccctaatcccatcagtgaccccactagccctgaa
atgatggtagagtcgctgtactcctcagttattaacgccattgacaacaagcgaatgcag
gacaccacaacgctggagaaggagaactcaaggattgctagcctgaaaaacgctcttgaa
cagtacagatgcactgcagaggagtcccactccaacctaagacgtgtaaaggatgacctc
ctttacttaagaagttcagtcttaaaagaacagcaggattttgggttggcactgtgcagc
atggccgcagaagtgcgcagcactgttgaacaaattagccagagtcacaaaatcgagtca
aacgagcagcataaacaggagcttctcctcgttcggcagcagctggagaagcaggttcag
gagttgacccaagaaaaccaagtaaatcagaatattgtgcgagatgtccaacgtgcgatg
ctggagctggagggccttatggagcgcaaagagaaagaacttacacagctggaaagcgag
agggagcgatggattgaaaaagagagaaactttgctgataagataaaaaatcttgagcag
ctccactgcgatcaaactgaagaaatcaaggcgcttttgacttcaaaagactctctggcg
actcagcttgaaaacctgcattttgagattgaacgcagtcagcagaaaatcagagaggag
ttggaagctgtgtctcagtgccatttaaaagagttggaggataaactggtgcaggagcac
aaaaaagagctagatagcctgaataaaaataacaaggaagcgctggaacatcttactgag
gaaaatagcacaaaattaaccgaggcagctgatcaccacgctagcgccattaaagacaag
gacagtcagatcaaagaaatggaagctcggcttacggagcttgcagaactccgttgtcga
ctagaggtagagctggccctcaaagagtctgagacagaggaggtgaggatcttattcgaa
gaagccaagatgcaacagacagaagctgtaaaaaaccaagtggaggctgagaccaaagtg
cttagagatgagctgacagatctcaagaggaagcttgaagctaaaaacgaggagtatgaa
gtggacctagcagagctgaggactctgatgaggattgaaaaggaccactgcatctcagag
ctggtggacagacatgaggaagaggctcttatgttgcacggcaaaatctccgccctacag
cagcactcccaggatcttaataaatatcacgaacagcaacaggaggcgcttagagaggag
cttgctgctctgagtgaagaaaaagaaaagcagttcaggagtttccaggagcttgagcag
gagttgaggactgttatcaaaaatttgcaggcagaaaatgatctgctctctaaaaacctc
gaacaggaaagacgtgcagctcagaaggaggaagcctcgaatgttgtatcaatggaggcc
tttaaagagttagagcagcagaaggaggagatggagaagagacttctggaaaaaaatagg
caacttgagaatgagcttcatgagaagaagctttctgaaagtgaggaagggatgccgctg
catgctgaggaccgtgcaggtgctgcagcacctctgtctctagactcagccttacaggag
cgcctgcagcaggagagagcatccctgcagtcccagattgagctgttggagaagcaaaaa
aaggaagagattcagaatctgaaaacatcactaatcgcagagcagcagacaaacttcaac
accgttctaacaagagaaaagttgaaaaaggagcagattatcaacgacctcacagagaag
ttacgaaaagttacccagcagcaagaaaaggacaaagctctgatagagacgctgtctgag
gaccgagcaagtatgatgcaggagaaaaaacaactggaggaagagctcaaccgcctccgc
aactctgcactggtctcttcggccttcttcccgtccaactcggctcaagatctctcagag
gctggagcagcaggaagagctctgcctgttgcaggggcctgttcatcagagacgcctgca
gaaatggaccgactagcccctgtagcaacattcagagatgatgaacatgtcgattcagca
gtagaagcaagcttggtcgctgctgatgacaccatgatgtctgaagagaagcagcggata
atgttgcttgagaggactttgcacatgaaggaagaagaaaataagcgcctcagccaacga
ctgatgtctcaaagcatgtcctctatgtcgtctcgccattcagacaaaatcgccatcaga
gatttccaggtcggcgatttggttctaatcatccttgatgaaaggcatgacaactacgtg
ctcttcactgttggtcccaccctctactttctgcactcagaatctctcactgcgctggac
cttaaaccggcatcagggacctcaagacggccgtgggtacttggaaaggtgatggaaaag
gaatattgccaggctaaaaaggcccaaaacaggttcaaggttcctttaggtaccaagttc
tacagagtgaaagccgttccatggaacagaaaagtctaa
DBGET
integrated database retrieval system
