Cyprinodon tularosa (White Sands pupfish): 119797087
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Entry
119797087 CDS
T07496
Symbol
exosc10
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119797087 (exosc10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctul03019
]
119797087 (exosc10)
Messenger RNA biogenesis [BR:
ctul03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
119797087 (exosc10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
119797087
NCBI-ProteinID:
XP_038161928
LinkDB
All DBs
Position
Unknown
AA seq
887 aa
AA seq
DB search
MKTSKKKESTRRPQENNAEGNNEEESELCPGFKDVDAFVKYGLGAVLSATKASAGLPQAG
DDYDFYRSFPGFQEFCESQGDKLLHCMSQIMQHHGCRSHIRDQNKLTGVEERFDLVVDSN
DVILERAGILLDEADGVNRSQNPVMPAGFQPPKIVVSSWNRKGSSSRSETFRLLHAKNVA
RPQLKFKEKVDNSNTPFVPKIFIKPNAVKPLPSYFSNKQIRKERPEDLDVPAALADFIHQ
QRTQEHVEDMFAHPYQYELDHLTVPESLLSKPEPQMYKPMAETKLSFIDSLDDLVTLNEK
LCRLSEFAVDLEHHSYRSFLGLTCLMQISTREEDFIIDTLELRSEMYILNEAFTDPSIVK
VFHGADSDIEWLQRDFGLYVVNLFDTHQASRALNLARHSLDHLLKQFCNVNSDKRYQLAD
WRIRPLPEEMIEYARADTHYLLYIYDCMRAQLLESNHGQPGLLQSVWNKSKDVSLKKYMK
PIYTEESYLELQRKQKRSFNTQQLTTFRLLYAWRDKLARQEDESTGYVLPTHMMIKISEE
LPKEPQGIIACCNPVPPLVRQQVNELHLLVQQGREMPLLKAEIAAQKKKGLTPIKKAEVT
LFGPHDTSRGSEIDRPQDTADEVPVKEGILFSEEDHKMDVDEQKISSLLAPAKITLFQEM
ETPADQESLSVAQTKARRIIESFENPFRMYLPSTGVHVNKNAKFDPSSKIFEISKRWKLQ
SIEQQQKEMEVKKKSTEEAKQQAKKLSEERTKAKQSYQESLRNITTVRQQAAQSKDGAKK
RAREGSEVGEVTKQSKKLMKSTEKAQKTEPPAKESFTPFDYAQSDLKVFDGSKAKDDTQF
DPNRQAQGFRKKRFPQGPKNNSSAGNRSMSYLSGKSNRGFRHNWPKR
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacctcgaagaaaaaggaatcaaccaggcgacctcaggaaaataatgcagagggc
aacaatgaagaggaaagtgaactgtgtcctggtttcaaagacgtagacgccttcgttaaa
tatggtttgggggctgtgttatcagccactaaagcctcagctggtttacctcaggctgga
gacgattatgatttctatcggagctttcctggcttccaggagttctgtgagagtcaagga
gataagcttttgcactgcatgagtcagataatgcagcatcatggctgtagatctcacata
agagaccagaacaaactgactggagtggaggagaggtttgacttggttgtagactcaaac
gatgttattctcgaaagagcgggtatcctccttgatgaagctgatggggtgaacaggagc
cagaatcctgttatgcctgctgggtttcagcctcccaaaatagttgtttccagctggaat
cgtaagggttccagctctcgatcagaaactttccgacttcttcatgccaagaacgtggcg
aggccccagctgaaattcaaggagaaagttgacaacagcaatacgccttttgttcccaag
attttcatcaagccgaatgcagtgaagccacttccatcgtatttctcaaacaaacaaata
cgtaaagagaggcctgaagacctcgatgtccctgctgccctggctgactttatccaccag
cagaggactcaggaacatgtggaagacatgtttgcacatccataccaatatgagctggac
cacctaactgtaccagaaagcttactgtctaaaccagagcctcagatgtacaaacccatg
gctgagaccaagctatcatttattgactcactggacgacctggtcactcttaacgagaag
ctgtgcagattatctgaatttgcagtggatcttgagcaccattcctacaggagttttctc
ggtctcacctgcctgatgcagatctccaccagagaggaagacttcatcatcgacactctg
gagctccgcagtgaaatgtacatcctcaacgaggccttcactgaccccagtatagtaaaa
gttttccacggtgctgactctgacatcgagtggctccagagggactttggcttgtatgtt
gtcaaccttttcgacacccatcaggcaagccgagccttgaacctggccagacattccctc
gaccatttactcaaacagttctgcaacgtgaactccgacaaacgctaccagctggctgac
tggaggattcgccccttgccagaagagatgatcgagtatgctcgcgcagacacccactat
ctcctttacatctacgactgcatgagggcacagctgctggagtcgaaccacgggcagccg
ggcctgttgcagagtgtctggaacaaaagcaaagacgtttcattgaagaaatacatgaag
ccaatctacacagaggagtcgtatttggagctccagaggaagcagaaaaggtcctttaac
acccagcagctcaccacgttcaggctgctatacgcctggagggacaagctggccaggcag
gaagatgaaagcaccggatatgtcctgcccactcatatgatgatcaaaatatcagaagag
ctgcctaaagagcctcagggtatcattgcttgttgtaaccccgtcccaccgctggtgagg
cagcaggtcaatgagcttcatttgttagtgcagcaaggcagggagatgccactcctgaag
gctgagattgcagctcagaagaagaaaggacttacacctattaaaaaggctgaagtgacg
ttgtttggtccacatgatacgtccagggggtccgagatcgaccgtcctcaggatacagct
gatgaagtcccagttaaagaaggaatccttttctcagaggaggatcataaaatggacgtt
gatgagcaaaaaataagcagccttttggctccagcaaaaattacccttttccaggaaatg
gaaactccggctgaccaagagtccctctccgtagcccagaccaaagccaggcgcattatt
gaatcttttgaaaatcctttcagaatgtatttaccctccactggtgtgcatgtgaacaaa
aacgctaagtttgacccgtcttcaaaaatatttgagatcagcaagagatggaaactgcag
agtatcgaacagcagcagaaagagatggaggtcaagaagaaatcaactgaagaagcaaaa
caacaagcaaagaaactgtcagaggaaagaaccaaggctaaacagagctaccaggagtcc
ctgcgtaatatcaccaccgtacgccagcaagcagcacagtcaaaggatggtgcaaagaag
agggcaagggagggcagtgaggttggagaggtgactaaacaaagtaaaaagctaatgaaa
tcaacagagaaagcacagaagactgaacctcctgctaaagaaagcttcacaccctttgac
tatgctcagtcagatctgaaagtttttgatggctccaaagcgaaggacgacacacagttt
gatccaaatcggcaagcacagggctttaggaaaaagaggtttcctcaaggtccaaaaaac
aacagttctgcaggaaacagaagtatgtcatacctcagtggcaaatcaaacagaggattc
cgacataactggcccaagagataa
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