Cyprinodon tularosa (White Sands pupfish): 119797274
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Entry
119797274 CDS
T07496
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04120
Ubiquitin mediated proteolysis
ctul04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119797274 (syvn1)
04120 Ubiquitin mediated proteolysis
119797274 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ctul04121
]
119797274 (syvn1)
Enzymes [BR:
ctul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119797274 (syvn1)
Ubiquitin system [BR:
ctul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119797274 (syvn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf_RING_Vps8_fungal
zf-RING-like
zf-RING_Vps41
FAR1_N
zf-HC5HC2H
zf-Nse
FANCL_C
Motif
Other DBs
NCBI-GeneID:
119797274
NCBI-ProteinID:
XP_038162217
LinkDB
All DBs
Position
Unknown
AA seq
634 aa
AA seq
DB search
MMVRAALVTATSLALTGAVVAHAYLLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGK
FMRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWL
AEDRVDFMERSPNISWVFHLRVLSLLGLLAVMDFMFVNHACHSIITRGASVQLVFGFEYA
ILMTMVLTTFIKYILHTVDLQSENPWDNKAVYMLYTELFTGFIKVLLYIAFMTIMIKVHT
FPLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQASDNVCIICREEMV
TGAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASSNNQTQAAAPAPAPAPAAPANA
PAAPAANAPGMLPAFPPGIFPFWGPFPAVPPPAAAAPPPAPGATDPPQSNAEAAQAAGTS
EPASAAADGATSSTAAPGSAIPGFPFSFPPPPFPAAPWLPMPPPPPFVSSMPPPPPSLSR
LTEEELRELEAEGRRGLEARLQCLQNIHTLLDAAMLNIHHYLSTVTTLTPPGPEGDGAAG
AGGSSQEAAASSTQSSTTEKESSTSDPASGAAVSSQPADSTSSTSESERKENWDEELMED
ENGEPSAAELRRRRLRKLETASPSSSSPPPPPDS
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgcgggcagccttggtgacggccaccagtctggcgctgactggggctgtggtg
gcccatgcgtacctgctcaaacatcagttctacccgactgttgtgtacctaaccaaaagc
agcccaagtatggcggttttgtacatccaagcgtttgtgttggtgtttctgctgggaaag
ttcatgagaaaggtgttttttggccagctaagggctgccgaaatggagcacctcatcgag
cgctcctggtacgcggtgacggaaacgtgcctggcctttaccgtgttcagggacgatttc
tcccctcgcttcgtcgcactcttcaccctgctgctcttcctgaagtgcttccactggctg
gcggaggatagagtggactttatggagaggagtccaaacatatcgtgggttttccacttg
agagtattgtctctgctcgggctcctggctgtcatggacttcatgttcgttaaccacgcc
tgtcacagcatcatcaccagaggggcttcggtccagctcgtctttgggtttgagtacgcc
atcttgatgaccatggtcctgaccaccttcatcaagtacatcctgcatactgtggacctt
cagagtgagaacccctgggacaacaaggccgtctacatgctctacactgagctcttcaca
ggtttcatcaaggttctcctgtacatcgctttcatgacgattatgataaaggtgcacacc
ttccctctgttcgccatccgacccatgtacctggccatgaggcagtttaagaaagctgta
acggatgctatcatgtcgaggagagcgatccgcaacatgaacacgctatatcctgatgct
acccctgaggatctgcaggcctctgacaatgtttgcatcatctgcagagaggaaatggtc
accggagccaagaagctaccctgtaatcacatattccactcaagctgcctgcgctcctgg
ttccagaggcagcagacctgccccacctgccgcatggacgtcctcagagcatccagtaac
aaccagactcaggctgcggccccggctccagccccggcccctgcagcacctgccaacgct
cctgctgctccggccgcaaatgctcctggcatgcttccagccttccctccaggaatcttc
cctttctggggtccttttcctgccgtccctcctcctgcagccgcggctccgcctccagct
cctggtgcaactgaccctccacagagcaacgcagaggcggctcaggcagctggcaccagt
gagcctgcgtcagctgctgcggacggcgctacgtcatcaacagctgctccagggtctgca
atcccaggattccctttctccttcccgcctccgcccttccctgccgctccatggctgccg
atgccaccgcctccaccctttgtgtcgtcgatgccgcccccgcctccgtcgctgtctcgc
ctgacggaagaggagctgagggagctggaagctgaggggcggcggggcctggaggcccga
ctgcagtgtctccagaacattcacactctgctggacgccgctatgctcaacatccaccac
taccttagcacagtcaccacgctaacccctccggggcctgagggcgacggcgctgcagga
gccggaggatccagtcaggaggcagctgccagcagcactcagagctcgaccacagagaag
gaatcctccacctcggatccagcgagtggagccgcggtctcctcccagcccgccgactcc
acctcctccacttcagagtcggaaagaaaggaaaactgggacgaagaactgatggaggac
gagaacggggagccgagcgccgctgagctgaggcgccgccgcctccgcaagctagagaca
gcgtcaccgtcatcctcatcgcccccccctcctccagatagctag
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