Cyprinodon tularosa (White Sands pupfish): 119797547
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Entry
119797547 CDS
T07496
Name
(RefSeq) Down syndrome cell adhesion molecule homolog isoform X1
KO
K06767
Down syndrome cell adhesion molecule
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ctul04515
]
119797547
Cell adhesion molecules [BR:
ctul04515
]
Immunoglobulin superfamily
DSCAM family
119797547
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
Ig_5
C1-set
V-set_CD47
C2-set_3
Interfer-bind
fn3_2
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
119797547
NCBI-ProteinID:
XP_038162592
LinkDB
All DBs
Position
Unknown
AA seq
2028 aa
AA seq
DB search
MWILALIFSQCILNVFCEDLRSSLYFVNASVQEVVFASTTGTSVPCPAAGVPPVSLRWYL
ATGEEIYDVPGIRHVHPNGTLQIFHIPPSSFSKLIHDNTYYCTAENHSGRIRSQDVHIKA
VLREPYTVRVEDQKAMRGNVAVFKCIIPASVEAYITVVSWEKDTMSINAEMSRFLITSTG
ALYILDVQMEDGLYNYRCMTRHRYTGETRQSNSARLIVSDPTNSAPHILDSFERREVMAN
HRVELPCKASGHPAPKYRWLKDNRPLEPDTRFRQSVTGLLIERAHSSDTGTYVCEVWNNY
GNAEVVGRLQVKEPLKVTVSPRKVKGSVGSQVSLTCSVTGSEEYQLSWYRNGELIYPSNS
VRMTGQHRENLVMAGMAKSDGGAYQCFARHGKMSAQEFVQVILEDGTPKILASFSEKVYN
VNEFVSLLCTVKGTPEPRVTWTLDDEPVIRDSRHRISYYTNAEGHVTSHLNITQTQVPDG
GVYRCICNNSAGTVSYQARINVRGPASIRPMKNLTAIAGRDMYIHCRVIGYPYYSIKWYK
DSNLLPYNHRQRAFENNGTLKLFDVQKDVDEGEYTCNVLVQPQLSTHQSVYVTVKVPPTI
QPFEFPRFFIGQRVFIPCVVMSGDQPVSITWQKDGRPIPASLGVTMDYIDFTTSLRISNL
TLAHNGNYTCIASNEAAAVEHQSQLIVRVPPKFVVQPKDQDAIYGKAVILNCSAEGYPVP
TIQWEYSKGAGVPQFKPIALNSGFRIEVLVNGSLLIKHVLEEDSGFYLCRVSNDVGADVS
KSMYLNVKIPAMITSYPNTTLATQGEEKKMSCTAHGEKPIMVRWEKEERIINPETSRYVV
SVKEAGDEVISTLQIMPTVREDSGFFSCHAINSFGEDRGIIQLTVQEPPDPPEVEIREVK
DRTIALRWTMGFDGNSPITGFDIESKNKSASWDTAQKTKDVSPQLNQATIIDLHPSSTYN
IRMFAKNLIGKSEASNELTITTDEAAPDGPPQDVQLEALSSQSIRVTWRPPKKHLQNGAI
RGYQVGYREYSSGGNYQFSVISVETTGDNAESLVLDNLKKFTQYGVVVQASNSAGTGPSS
TEVAATTLEDVPSRPPENVQAVATSPEVISLSWLTPPKDALNGNLLGFRVIYWANLPDGE
LGEIRNVTTSKPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIYTRTKEDVPGPPAGVK
AAAASNSVVFVSWLPPLKVNGIIRKYTVFCSNPHPTVSSEFEAAPDVFFYRIPNLSRNRQ
YSIWVVAVTAAGRGNASEIITVKPMAEAPARILTFNRTVTTPWMRDIVLPCKAVGDPSPT
IKWLKEINGTPAPVAIDSRRSVHGNGSLVIRTVKAEDSGNYTCVAGNSFGSDKIVLNLQV
QVPPDQPRLTVTKTTTTSITLSWIPGDNGGSSIRGYILQYSEDNSEQWGNFAISPSERSY
RLENLKCGTWYKFTLTAQNGVGPGRISEIIEAKTHGKEPQYSKEQELFTSINATRVKLNL
NGWNNGGCPITSFTLEYRAIESPTWTTAQRTSLTKSYILYDLQEATWYELQMKVSNSAGY
AEKRVKFATLSYDGSTIAPLVKAPNVSEENPGGGEGLKMMVTISCVLVGIVVIFIGLLVL
RRRRREQRLKRLRDAKSLAEMLMSKNTRPAEPINKQQQTLRMHIDIPRAQLLIEERDTME
TVDDRSTVLLTDNDFGETQKQKSSTVTHTVHYQSLSQATGPLVDVSDARPGTSKSNPTAR
RTAKAGPAARNRYASQWTLNRPHPPVSSHTLSTDWRLPTPRVAGSVDKESDSYSVSPSQD
TDRARSSMVSTESASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQMTAGTND
YTDSLTSSTPSESGICRFTASPPKPQDVSRVMNMAVPKAHRPGGELVHLPPYLRMDFLLN
RGMSCSGSSRGTASGERAAMGQTCLEPQKSRSLKRPSRMAPPTPTEAPQASRDPVAQWQP
GSAATLPHREGSELAQAAKLSTSQESLLDSRGHLKQSSNPYAKSYTLV
NT seq
6087 nt
NT seq
+upstream
nt +downstream
nt
atgtggatattggctcttatcttttcccagtgcatcttgaatgttttctgtgaagatcta
cgttccagcttatattttgtcaatgcatctgtgcaagaggtagtgtttgccagcaccaca
gggacatcggtgccctgtcccgctgcaggcgtaccccctgtctcactgcgctggtacctg
gccaccggcgaggagatctacgatgtgccagggatccgccatgtgcaccccaatggcacc
cttcagatcttccacatccccccttccagtttcagcaaactcatccatgacaacacttac
tattgcacagcggagaaccactcagggagaatcaggagccaagatgtccacatcaaggct
gtcctacgagagccgtacactgtccgggtggaggaccagaaagccatgagaggcaatgtg
gcggtcttcaagtgcattatccctgcctcagtggaggcatacatcactgttgtgtcctgg
gagaaagacacaatgtcaatcaatgctgaaatgtcacggtttctaattacatccacgggt
gccctatatatcctggatgtgcaaatggaagacgggctttacaactacaggtgtatgaca
cgacatcggtacacaggggagacccgacagagcaatagtgcccgtctaattgtctcagat
ccaacaaattcagcaccacacatactggacagcttcgagcgtcgggaggtgatggcaaat
catcgagtggagctgccctgcaaggcctcaggccaccctgcacccaaataccgttggcta
aaggacaaccggccgctggaaccagacacacgctttagacagagtgtgacaggcctgctg
attgaaagagcccactccagtgacacagggacatatgtgtgtgaggtgtggaacaactac
ggaaatgctgaggttgttggcaggttgcaggtaaaagaacctctgaaggtgacagtgagt
ccgcggaaggtgaagggcagcgttggaagccaggtttccttgacctgcagtgtaaccggc
tcagaggagtatcagttatcctggtaccgcaatggagagctcatttaccccagcaacagt
gtccggatgacgggccaacacagagagaacctggttatggctggcatggccaaaagcgat
ggaggagcctatcagtgcttcgccaggcatggcaagatgtctgcccaagaatttgttcaa
gtgatcctggaagatggcaccccaaagatcctggcatcattcagcgagaaggtctacaac
gtcaatgagtttgtgtcgctgttgtgtacggtgaagggtacacccgagcccagggtgaca
tggactctggatgacgaaccggtcattcgggacagccggcaccgcatctcctactacacc
aacgcagaaggccacgtgaccagccacctcaacattacccaaacccaggtccctgatgga
ggggtgtaccgctgcatctgcaacaactcggcagggacggtttcgtaccaggcgcgaata
aacgtaagagggcctgccagcatcagaccaatgaaaaacctcactgccattgctgggcgg
gacatgtacatccactgccgcgtcattgggtacccttactattccatcaagtggtacaag
gactccaatttgctgccgtacaaccacaggcagcgagccttcgagaacaacggcactctg
aagctgtttgatgtgcagaaggatgtggacgaaggagaatacacgtgtaacgtgctggtg
cagcctcagctgtccactcaccagagtgtctatgttactgtaaaagtcccccctaccatc
cagccatttgagttcccacggtttttcatcggccagcgagtcttcatcccctgcgttgtc
atgtcaggcgaccagcccgtctccatcacctggcaaaaagatggcaggcctatcccagcc
agcctgggcgtcaccatggactacatagatttcacaacctcactgcgcatatccaacctc
acgctggcccacaatggcaactacacctgcatcgccagcaatgaagccgctgccgtggag
caccagagtcagctcatcgtccgagttcctccaaaatttgtggttcaaccaaaggaccag
gatgccatctatggaaaagcagtgatcctaaactgctcagcggaaggttatccagttcct
accattcagtgggagtactcaaaaggtgccggggtgcctcagttcaaacccatagccctg
aactcaggctttcgaatcgaagttctggtgaacggctctctccttatcaagcatgtgttg
gaggaggacagtggcttctacctttgcagagtcagcaatgatgtcggggccgatgttagc
aagtccatgtatctgaacgtcaaaattcctgccatgatcacatcctatccaaacaccaca
ctggccacgcaaggagaggagaagaagatgagctgcaccgctcatggtgagaaacccatc
atggtgcgttgggagaaagaggaacggatcatcaacccggagaccagccgctacgtggtt
tctgttaaggaggcgggcgatgaagtcatctctaccctgcagatcatgcctacagtccgg
gaagattcaggcttcttctcctgccatgcaatcaactcctttggtgaagacagaggaatc
attcagctcacagtccaagagccaccagacccacctgaggtggagatcagagaggtgaag
gacagaaccatcgctcttcgatggaccatgggtttcgatggcaacagtccaatcacaggg
tttgacatcgagagcaaaaacaaatcagcctcctgggacaccgctcagaaaaccaaagat
gtgtcgcctcagctgaaccaggccaccatcatcgaccttcatccctcctccacatacaac
attcgcatgtttgccaagaacctcatcggcaagagcgaggccagcaatgagctcaccatc
accacagatgaagcagctcctgatggacctcctcaagacgtgcagctggaagccctttca
tctcagagcatccgggtcacatggaggccgcctaagaagcacctccagaacggggccatc
cgaggctaccaggtgggctacagggaatacagctccggtgggaattaccagttcagtgtg
atcagtgtggaaacaactggggacaacgcagaaagtctggtcctggacaacctgaagaag
ttcacccagtatggagtggtggtgcaggccagcaacagtgcagggacagggccgtcgtct
actgaggtggctgctaccactctggaggacgtgccgagtcgtcctcctgagaacgtccag
gctgtagcaacgtctccagaggtcatctcgctatcctggctgacgcctcctaaagatgct
ctgaatggcaacctgctgggattcagagtcatctactgggccaacctgcctgatggagag
ctcggtgagatcaggaacgtcacgacctctaagccctcgctggagctggatgggctggag
aaatacaccaactacagcatccaggtgttggcctttaccagagctggagatggtgttcgc
agtgagcagatttacacccgcaccaaggaggatgttcctggtcctccagctggtgtgaaa
gctgcagctgcatccaactcagtggtgtttgtgtcctggcttcctcctctcaaagtgaac
ggcatcatcagaaaatacaccgttttctgctccaacccccaccctacggtgagtagtgaa
tttgaagcggccccggatgtcttcttctaccgcatccctaacctgagcagaaaccgacag
tacagtatctgggtggtggctgtcactgccgccggccgaggaaacgccagcgagatcatc
actgtcaaacccatggcggaggcaccagctagaatcctgaccttcaacaggacggttacg
accccttggatgagggacattgtgctcccctgtaaggcagtgggggatccatccccaacc
atcaagtggctgaaggagatcaatggaacccctgctccagttgcgatagacagccggcgc
agtgttcatggcaatggcagcctcgttatccgcacagtgaaagcagaggattctgggaat
tatacctgtgtggcgggtaacagctttggttcggacaagattgtcctcaacctccaggtt
caagttccacccgaccaacctcgcctcaccgtcacaaagacaaccacaacctccatcacc
ctctcctggatcccaggggacaacggaggcagctccatacgaggctacatcctgcagtac
tcggaggacaacagcgagcagtggggtaactttgccatcagtcccagcgagcgatcgtac
cgcctggaaaatctcaaatgtggtacctggtacaagttcaccctcacggcccagaatggg
gttggaccgggtcgcatcagtgagatcatagaagcaaagacccatggcaaagagcctcag
tactcgaaggaacaggagcttttcaccagcattaacgccactcgggtcaagctaaatcta
aacggctggaataatggcggatgtccgatcacctccttcaccctggaataccgggccatc
gagtcgcccacctggaccacagcgcagcgcacgtctcttacaaagagctacatcctgtac
gacctgcaggaggccacctggtatgagctgcaaatgaaagtttccaacagcgccggctac
gctgagaagagagtcaaatttgctacgctcagctatgatggcagtaccatcgctcctttg
gtgaaagcacccaatgtgagtgaggagaacccagggggaggcgaagggttgaagatgatg
gtgaccatttcctgtgtgctggtggggattgttgtaatcttcattggactgctggtgctt
agaaggagaaggagggagcagcggctcaagaggctgagagatgcaaagagtttggctgaa
atgctgatgagtaaaaacacccgtcctgctgagccgattaacaaacagcagcaaacgctg
cgtatgcacatcgacattcccagagcgcagcttctcatcgaggagagggacacaatggag
acagttgacgacagatccactgtgttgctgacagataatgactttggggagactcagaag
caaaagtcatccacagtcacccacacggtccattaccagtccctctcccaagccactggt
ccactggtagacgtatcagatgctaggccaggaaccagtaagtccaaccctaccgcccgc
cgcacagccaaagccggccctgctgcccgcaaccgctacgccagccaatggactctgaac
cgcccccacccccctgtctcctcccacactctcagcactgactggaggctgcccacaccc
agggtcgcaggttctgtagacaaggagagtgacagctacagtgtcagcccatctcaggac
acagaccgagcgcggagcagcatggtatctacagagagcgcctcctccacctacgaggag
cttgcccgagcctacgagcatgccaagatggaggagcagctgcgccatgccaaattcacc
atcactgagtgcttcatctctgacacgtcatcggagcagatgacggcgggcaccaacgac
tacaccgacagcctgacgtccagcacgccctccgagtcaggcatctgccgcttcaccgct
tccccacccaagcctcaggacgtcagccgggtcatgaacatggccgtgcccaaggcccac
agaccgggaggcgagctggttcaccttcctccatacctgcggatggacttcctgttaaac
cgaggcatgtcctgctcgggctcctccagggggacagctagcggagagagggccgccatg
ggtcagacctgccttgagccccagaaaagccgctctctgaagcggccgtctcgcatggcg
ccccccacgcccacagaggcccctcaggccagcagggacccagttgcccagtggcagccc
ggctccgccgccacgctccctcacagggaaggctcggagctggcccaggctgcaaagctc
agcacctcacaggagtccctgctggactccagaggacatctcaaacagagcagcaacccc
tacgcaaagtcttacacgctggtataa
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integrated database retrieval system
